Os05g0466700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os05g0466700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 37.95 | 0.289 | 11.9 | -0.44 | 0.217 | 1.03 | 1.03 | -2.83 | 0.22 | 2.21 | 21.44 | 1310 | -- | -- |
| 41.75 | 0.301 | 11.9 | 0.134 | 0.279 | 1.02 | 0.852 | -- | 0.358 | 1.97 | 15.56 | 7093 | -- | -- |
| 41.56 | 0.3 | 11.9 | -0.398 | 0.294 | 0.979 | -- | -2.46 | 0.236 | 2.24 | 21.36 | 1495 | -- | -- |
| 43.95 | 0.309 | 11.8 | 0.0781 | 0.262 | 1.23 | -- | -- | 0.396 | 2.23 | 5.649 | 5635 | -- | -- |
| 44.24 | 0.31 | 11.9 | -0.392 | -- | 1.1 | -- | -2.58 | 0.226 | -- | 21.61 | 1238 | -- | -- |
| 66.47 | 0.382 | 11.8 | 0.688 | 0.327 | -- | 0.926 | -- | 0.645 | 2.18 | -- | -- | -- | -- |
| 69.68 | 0.391 | 11.8 | 0.661 | 0.329 | -- | -- | -- | 0.64 | 2.2 | -- | -- | -- | -- |
| 48.07 | 0.323 | 11.8 | 0.0608 | -- | 1.3 | -- | -- | 0.381 | -- | 7.576 | 5452 | -- | -- |
| 43.98 | 0.309 | 11.9 | -- | 0.281 | 1.28 | -- | -- | 0.359 | 2.11 | 5.968 | 5706 | -- | -- |
| 76.13 | 0.408 | 11.8 | 0.675 | -- | -- | -- | -- | 0.647 | -- | -- | -- | -- | -- |
| 81.2 | 0.422 | 11.8 | -- | 0.342 | -- | -- | -- | 0.566 | 2.24 | -- | -- | -- | -- |
| 48.14 | 0.323 | 11.9 | -- | -- | 1.33 | -- | -- | 0.369 | -- | 6.756 | 5457 | -- | -- |
| 88.15 | 0.438 | 11.8 | -- | -- | -- | -- | -- | 0.573 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 36.13 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 4 |
| 2 | 36.14 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 4 | 36.18 | wind | 5 | 43200 | > th | dose independent | rect. | 10 | 5 |
| 5 | 36.20 | wind | 5 | 43200 | < th | dose independent | rect. | 10 | 5 |
| 8 | 36.24 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 20 | 36.31 | wind | 5 | 43200 | > th | dose dependent | rect. | 10 | 15 |
| 23 | 36.38 | wind | 5 | 43200 | < th | dose independent | rect. | 9 | 7 |
| 31 | 36.43 | wind | 5 | 43200 | > th | dose dependent | sin | 20 | NA |
| 32 | 36.43 | wind | 5 | 43200 | > th | dose dependent | rect. | 9 | 12 |
| 34 | 36.45 | wind | 5 | 43200 | > th | dose dependent | rect. | 9 | 8 |
| 38 | 36.46 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 9 |
| 43 | 36.47 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 50 | 36.48 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 53 | 36.48 | radiation | 1 | 14400 | < th | dose dependent | rect. | 2 | 3 |
| 57 | 36.49 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 79 | 36.57 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 83 | 36.58 | wind | 5 | 43200 | > th | dose independent | rect. | 8 | 9 |
| 89 | 36.59 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 3 |
| 114 | 36.67 | wind | 5 | 43200 | > th | dose independent | rect. | 10 | 15 |
| 139 | 36.77 | wind | 7 | 43200 | < th | dose independent | rect. | 5 | 16 |
| 149 | 36.83 | wind | 7 | 43200 | < th | dose independent | rect. | 24 | 21 |
| 171 | 36.88 | wind | 7 | 43200 | < th | dose independent | rect. | 5 | 12 |
| 174 | 36.88 | wind | 7 | 43200 | < th | dose independent | rect. | 5 | 20 |
| 176 | 36.88 | wind | 3 | 43200 | > th | dose dependent | rect. | 11 | 3 |
| 180 | 36.89 | wind | 7 | 43200 | < th | dose independent | rect. | 24 | 17 |
| 182 | 36.89 | wind | 5 | 43200 | > th | dose dependent | rect. | 5 | 16 |
| 186 | 36.90 | wind | 7 | 43200 | > th | dose independent | rect. | 5 | 16 |
| 187 | 36.90 | wind | 7 | 43200 | > th | dose independent | rect. | 24 | 21 |
| 205 | 36.93 | wind | 7 | 43200 | > th | dose independent | rect. | 2 | 19 |
| 222 | 36.95 | wind | 7 | 43200 | < th | dose independent | rect. | 10 | 22 |
| 230 | 36.96 | wind | 7 | 43200 | > th | dose independent | rect. | 24 | 17 |
| 246 | 36.98 | wind | 5 | 43200 | < th | dose independent | rect. | 9 | 16 |
| 250 | 36.98 | wind | 7 | 43200 | > th | dose independent | rect. | 5 | 20 |
| 255 | 36.99 | wind | 7 | 43200 | < th | dose independent | sin | 0 | NA |
| 258 | 36.99 | wind | 5 | 43200 | < th | dose independent | rect. | 9 | 14 |
| 263 | 36.99 | wind | 7 | 43200 | < th | dose independent | rect. | 9 | 18 |
| 293 | 37.02 | wind | 5 | 43200 | > th | dose independent | sin | 23 | NA |
| 305 | 37.02 | wind | 5 | 43200 | > th | dose dependent | rect. | 5 | 12 |
| 316 | 37.03 | wind | 7 | 43200 | > th | dose independent | rect. | 10 | 22 |
| 349 | 37.06 | wind | 7 | 43200 | > th | dose independent | rect. | 19 | 22 |
| 350 | 37.06 | wind | 7 | 43200 | < th | dose independent | rect. | 19 | 22 |
| 494 | 37.16 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 11 |
| 508 | 37.18 | wind | 7 | 43200 | < th | dose independent | no | NA | NA |
| 524 | 37.18 | wind | 5 | 43200 | > th | dose dependent | rect. | 5 | 20 |
| 561 | 37.22 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 565 | 37.23 | wind | 7 | 43200 | > th | dose independent | no | NA | NA |
| 592 | 37.25 | temperature | 20 | 1440 | > th | dose dependent | sin | 18 | NA |
| 668 | 37.31 | wind | 7 | 43200 | < th | dose independent | rect. | 13 | 23 |
| 714 | 37.36 | wind | 7 | 43200 | > th | dose independent | rect. | 13 | 23 |
| 716 | 37.36 | wind | 7 | 43200 | < th | dose independent | rect. | 16 | 23 |
| 720 | 37.36 | wind | 5 | 43200 | > th | dose dependent | rect. | 24 | 21 |
| 838 | 37.51 | wind | 5 | 43200 | > th | dose dependent | rect. | 14 | 2 |
| 845 | 37.52 | wind | 5 | 43200 | > th | dose dependent | rect. | 24 | 18 |
| 860 | 37.53 | wind | 9 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 937 | 37.61 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 16 |