Os05g0463400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : PWWP domain containing protein.
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Os05g0463400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : PWWP domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 30.13 | 0.258 | 8.63 | 0.358 | 0.259 | -0.623 | -0.277 | 1.24 | 0.0702 | 3.33 | 24.07 | 5378 | -- | -- |
| 29.65 | 0.254 | 8.58 | 0.694 | 0.267 | -0.646 | -0.276 | -- | 0.129 | 3.31 | 22.06 | 3717 | -- | -- |
| 30.32 | 0.256 | 8.63 | 0.356 | 0.26 | -0.612 | -- | 1.24 | 0.0612 | 3.57 | 24 | 5374 | -- | -- |
| 29.8 | 0.254 | 8.58 | 0.691 | 0.267 | -0.649 | -- | -- | 0.129 | 3.68 | 22.06 | 3685 | -- | -- |
| 34.1 | 0.272 | 8.63 | 0.335 | -- | -0.638 | -- | 1.28 | 0.0546 | -- | 23.9 | 5374 | -- | -- |
| 42.35 | 0.305 | 8.53 | 1.03 | 0.295 | -- | -0.282 | -- | 0.369 | 3.06 | -- | -- | -- | -- |
| 42.6 | 0.306 | 8.53 | 1.04 | 0.295 | -- | -- | -- | 0.371 | 3.25 | -- | -- | -- | -- |
| 33.65 | 0.27 | 8.59 | 0.679 | -- | -0.677 | -- | -- | 0.126 | -- | 22 | 3854 | -- | -- |
| 31.81 | 0.263 | 8.6 | -- | 0.282 | -1.06 | -- | -- | 0.0432 | 3.34 | 17.16 | 47520 | -- | -- |
| 47.55 | 0.322 | 8.53 | 1.05 | -- | -- | -- | -- | 0.379 | -- | -- | -- | -- | -- |
| 71.11 | 0.394 | 8.56 | -- | 0.316 | -- | -- | -- | 0.255 | 3.25 | -- | -- | -- | -- |
| 36.3 | 0.281 | 8.6 | -- | -- | -1.07 | -- | -- | 0.0463 | -- | 17.12 | 47520 | -- | -- |
| 76.76 | 0.409 | 8.56 | -- | -- | -- | -- | -- | 0.262 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 29.85 | temperature | 25 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 5 | 30.02 | temperature | 10 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 7 | 30.02 | temperature | 25 | 4320 | < th | dose dependent | rect. | 22 | 7 |
| 64 | 30.16 | temperature | 25 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 69 | 30.16 | temperature | 10 | 4320 | > th | dose dependent | rect. | 22 | 7 |
| 80 | 30.17 | temperature | 25 | 4320 | < th | dose dependent | sin | 10 | NA |
| 231 | 30.28 | temperature | 15 | 4320 | > th | dose dependent | rect. | 23 | 1 |
| 258 | 30.30 | temperature | 10 | 4320 | > th | dose dependent | sin | 9 | NA |
| 324 | 30.32 | temperature | 30 | 4320 | < th | dose dependent | rect. | 13 | 17 |
| 326 | 30.32 | temperature | 30 | 4320 | < th | dose dependent | rect. | 22 | 17 |
| 424 | 30.36 | temperature | 20 | 4320 | > th | dose dependent | rect. | 2 | 14 |
| 449 | 30.37 | temperature | 20 | 720 | > th | dose dependent | rect. | 1 | 13 |
| 469 | 30.38 | radiation | 1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 595 | 30.41 | temperature | 10 | 4320 | > th | dose dependent | rect. | 13 | 18 |
| 616 | 30.42 | radiation | 1 | 14400 | < th | dose dependent | rect. | 6 | 12 |
| 625 | 30.42 | temperature | 10 | 4320 | > th | dose dependent | rect. | 14 | 16 |
| 652 | 30.43 | wind | 3 | 43200 | < th | dose dependent | rect. | 21 | 2 |
| 655 | 30.43 | radiation | 1 | 14400 | < th | dose dependent | rect. | 8 | 10 |
| 697 | 30.44 | temperature | 20 | 4320 | > th | dose dependent | sin | 3 | NA |
| 738 | 30.45 | temperature | 30 | 4320 | < th | dose dependent | no | NA | NA |
| 827 | 30.47 | temperature | 20 | 4320 | > th | dose dependent | rect. | 14 | 1 |
| 876 | 30.47 | temperature | 30 | 4320 | < th | dose dependent | rect. | 1 | 23 |
| 999 | 30.50 | temperature | 20 | 4320 | > th | dose dependent | rect. | 8 | 20 |