Os05g0462400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Lipin, N-terminal conserved region domain containing protein.
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Os05g0462400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Lipin, N-terminal conserved region domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 76.45 | 0.411 | 8.48 | 1.36 | 1.14 | 1.31 | 0.971 | -3.27 | 0.198 | 8.45 | 28.75 | 4692 | -- | -- |
| 83.79 | 0.426 | 8.54 | 0.868 | 1.2 | 1.07 | 0.747 | -- | 0.341 | 7.9 | 26.47 | 6956 | -- | -- |
| 79.39 | 0.415 | 8.48 | 1.34 | 1.13 | 1.29 | -- | -2.93 | 0.218 | 8.39 | 28.44 | 4708 | -- | -- |
| 83.47 | 0.426 | 8.54 | 0.674 | 1.11 | 0.956 | -- | -- | 0.204 | 8.24 | 27.3 | 6356 | -- | -- |
| 118.02 | 0.506 | 8.42 | 1.03 | -- | 1.46 | -- | -1.29 | 0.724 | -- | 25.7 | 647 | -- | -- |
| 113.68 | 0.5 | 8.59 | 0.223 | 1.2 | -- | 1.05 | -- | -0.0479 | 8.39 | -- | -- | -- | -- |
| 117.06 | 0.507 | 8.59 | 0.253 | 1.2 | -- | -- | -- | -0.049 | 8.28 | -- | -- | -- | -- |
| 117.34 | 0.505 | 8.5 | 0.979 | -- | 1.49 | -- | -- | 0.54 | -- | 25.7 | 704 | -- | -- |
| 92.22 | 0.447 | 8.56 | -- | 1.15 | 0.744 | -- | -- | 0.0849 | 8.07 | 28.5 | 6647 | -- | -- |
| 196.88 | 0.656 | 8.62 | 0.262 | -- | -- | -- | -- | -0.0358 | -- | -- | -- | -- | -- |
| 118.75 | 0.51 | 8.6 | -- | 1.2 | -- | -- | -- | -0.0772 | 8.27 | -- | -- | -- | -- |
| 124.1 | 0.519 | 8.56 | -- | -- | 1.22 | -- | -- | 0.253 | -- | 25.83 | 663 | -- | -- |
| 198.69 | 0.658 | 8.63 | -- | -- | -- | -- | -- | -0.0648 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 73.37 | humidity | 80 | 43200 | > th | dose dependent | rect. | 16 | 9 |
| 7 | 74.16 | humidity | 80 | 43200 | > th | dose dependent | sin | 16 | NA |
| 8 | 74.18 | humidity | 80 | 43200 | > th | dose dependent | rect. | 18 | 6 |
| 15 | 74.64 | humidity | 90 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 16 | 74.66 | humidity | 80 | 43200 | > th | dose dependent | rect. | 20 | 3 |
| 18 | 74.89 | humidity | 80 | 43200 | > th | dose dependent | rect. | 11 | 16 |
| 23 | 75.21 | humidity | 80 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 27 | 75.30 | humidity | 80 | 43200 | > th | dose dependent | rect. | 10 | 23 |
| 30 | 75.38 | humidity | 80 | 43200 | > th | dose dependent | rect. | 6 | 23 |
| 34 | 75.39 | humidity | 90 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 35 | 75.39 | humidity | 80 | 43200 | > th | dose dependent | rect. | 4 | 23 |
| 38 | 75.41 | humidity | 80 | 43200 | > th | dose dependent | no | NA | NA |
| 53 | 75.53 | humidity | 80 | 43200 | > th | dose dependent | rect. | 24 | 23 |
| 64 | 75.62 | humidity | 80 | 43200 | > th | dose independent | rect. | 3 | 16 |
| 67 | 75.62 | humidity | 80 | 43200 | > th | dose dependent | rect. | 20 | 23 |
| 85 | 75.79 | humidity | 90 | 43200 | < th | dose independent | rect. | 13 | 18 |
| 92 | 75.87 | humidity | 90 | 43200 | < th | dose independent | sin | 14 | NA |
| 96 | 75.91 | humidity | 90 | 43200 | < th | dose independent | rect. | 17 | 10 |
| 98 | 75.92 | humidity | 90 | 43200 | < th | dose independent | rect. | 14 | 13 |
| 147 | 76.27 | humidity | 90 | 43200 | < th | dose independent | rect. | 21 | 4 |
| 195 | 76.61 | humidity | 90 | 43200 | > th | dose independent | rect. | 13 | 14 |
| 200 | 76.68 | humidity | 80 | 43200 | < th | dose independent | rect. | 3 | 15 |
| 207 | 76.75 | humidity | 80 | 43200 | < th | dose independent | rect. | 2 | 17 |
| 241 | 77.01 | humidity | 90 | 43200 | > th | dose independent | rect. | 13 | 18 |
| 248 | 77.05 | humidity | 90 | 43200 | > th | dose independent | sin | 15 | NA |
| 256 | 77.11 | humidity | 70 | 43200 | > th | dose dependent | rect. | 2 | 17 |
| 283 | 77.26 | humidity | 80 | 43200 | > th | dose independent | sin | 1 | NA |
| 391 | 77.85 | humidity | 90 | 43200 | > th | dose independent | rect. | 21 | 4 |
| 405 | 77.91 | humidity | 90 | 43200 | < th | dose independent | rect. | 21 | 18 |
| 434 | 78.01 | humidity | 90 | 43200 | < th | dose independent | rect. | 17 | 22 |
| 477 | 78.20 | humidity | 80 | 43200 | > th | dose independent | rect. | 10 | 14 |
| 510 | 78.32 | humidity | 80 | 43200 | > th | dose dependent | sin | 4 | NA |
| 517 | 78.38 | humidity | 80 | 43200 | < th | dose independent | sin | 1 | NA |
| 529 | 78.45 | humidity | 90 | 43200 | < th | dose independent | no | NA | NA |
| 545 | 78.52 | humidity | 90 | 43200 | < th | dose independent | rect. | 23 | 23 |
| 581 | 78.66 | humidity | 80 | 43200 | > th | dose independent | sin | 19 | NA |
| 592 | 78.71 | humidity | 80 | 43200 | < th | dose independent | sin | 20 | NA |
| 604 | 78.75 | humidity | 70 | 43200 | > th | dose dependent | sin | 2 | NA |
| 610 | 78.80 | temperature | 25 | 4320 | > th | dose dependent | rect. | 12 | 6 |
| 629 | 78.87 | temperature | 25 | 4320 | > th | dose dependent | rect. | 10 | 8 |
| 652 | 78.92 | temperature | 25 | 4320 | > th | dose dependent | rect. | 12 | 3 |
| 706 | 79.05 | temperature | 25 | 4320 | > th | dose dependent | rect. | 10 | 16 |
| 733 | 79.10 | temperature | 25 | 4320 | > th | dose dependent | sin | 21 | NA |
| 748 | 79.12 | humidity | 90 | 43200 | < th | dose independent | rect. | 2 | 23 |
| 767 | 79.14 | temperature | 25 | 4320 | > th | dose dependent | rect. | 24 | 18 |
| 773 | 79.15 | humidity | 90 | 43200 | > th | dose independent | rect. | 19 | 21 |
| 928 | 79.31 | humidity | 90 | 43200 | > th | dose independent | no | NA | NA |
| 979 | 79.36 | temperature | 25 | 4320 | > th | dose dependent | no | NA | NA |