BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os05g0462400 Os05g0462400|AK099608
         (884 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os05g0462400  Lipin, N-terminal conserved region domain cont...  1729   0.0  

>Os05g0462400 Lipin, N-terminal conserved region domain containing protein
          Length = 884

 Score = 1729 bits (4479), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 847/884 (95%), Positives = 847/884 (95%)

Query: 1   MNVVGRVGSLISQGVYSVATPFHPFGGAVDIIAVEQPDGSYRSTPWYVRFGKFQGVLKGA 60
           MNVVGRVGSLISQGVYSVATPFHPFGGAVDIIAVEQPDGSYRSTPWYVRFGKFQGVLKGA
Sbjct: 1   MNVVGRVGSLISQGVYSVATPFHPFGGAVDIIAVEQPDGSYRSTPWYVRFGKFQGVLKGA 60

Query: 61  EKVVTITVNGVDASFHMQLDNSGQAYFMRELVXXXXXXXXXXXXXXXXXXXXXXXXXKSD 120
           EKVVTITVNGVDASFHMQLDNSGQAYFMRELV                         KSD
Sbjct: 61  EKVVTITVNGVDASFHMQLDNSGQAYFMRELVPGSENSGTSSEEEEASCEPEPPARSKSD 120

Query: 121 GDLYIGAKGRPGSPESNVECQEKQAIEEFDSYGYSRMEVAEDSAKQPDGSNSEMVLVSVD 180
           GDLYIGAKGRPGSPESNVECQEKQAIEEFDSYGYSRMEVAEDSAKQPDGSNSEMVLVSVD
Sbjct: 121 GDLYIGAKGRPGSPESNVECQEKQAIEEFDSYGYSRMEVAEDSAKQPDGSNSEMVLVSVD 180

Query: 181 GHVLTAPISSTEENVEDVQLSEPQFHLGPGESSSGDFSRSGEVWEAGIVGDLYMPQEKVK 240
           GHVLTAPISSTEENVEDVQLSEPQFHLGPGESSSGDFSRSGEVWEAGIVGDLYMPQEKVK
Sbjct: 181 GHVLTAPISSTEENVEDVQLSEPQFHLGPGESSSGDFSRSGEVWEAGIVGDLYMPQEKVK 240

Query: 241 FDSGNQQEALEELGDVPIETDKSHHVPVTGDEVLHTSVYEDVTSALTNEVESLVVPELGN 300
           FDSGNQQEALEELGDVPIETDKSHHVPVTGDEVLHTSVYEDVTSALTNEVESLVVPELGN
Sbjct: 241 FDSGNQQEALEELGDVPIETDKSHHVPVTGDEVLHTSVYEDVTSALTNEVESLVVPELGN 300

Query: 301 NDEDYQALINVDEVHDISENKNEGCRPPSSQYEVCDVSKTDDEGYQPLATEELGDVPIET 360
           NDEDYQALINVDEVHDISENKNEGCRPPSSQYEVCDVSKTDDEGYQPLATEELGDVPIET
Sbjct: 301 NDEDYQALINVDEVHDISENKNEGCRPPSSQYEVCDVSKTDDEGYQPLATEELGDVPIET 360

Query: 361 DRSHHVPVTGDEVLHTSVYEDVPSALTNEVESLVVLESGNNDEDYQALINVDEVHDISEN 420
           DRSHHVPVTGDEVLHTSVYEDVPSALTNEVESLVVLESGNNDEDYQALINVDEVHDISEN
Sbjct: 361 DRSHHVPVTGDEVLHTSVYEDVPSALTNEVESLVVLESGNNDEDYQALINVDEVHDISEN 420

Query: 421 KNEGCRPPSSQDEVCDVSKTDDEGYRPLATEDEARDVSKNNDEGYQPLATENEACDVPLL 480
           KNEGCRPPSSQDEVCDVSKTDDEGYRPLATEDEARDVSKNNDEGYQPLATENEACDVPLL
Sbjct: 421 KNEGCRPPSSQDEVCDVSKTDDEGYRPLATEDEARDVSKNNDEGYQPLATENEACDVPLL 480

Query: 481 ENDEACRVPANVDKVCDVSNEDTELEIASPSFGKYDTFKSCLDLSSQIDDGDSGTEPFSP 540
           ENDEACRVPANVDKVCDVSNEDTELEIASPSFGKYDTFKSCLDLSSQIDDGDSGTEPFSP
Sbjct: 481 ENDEACRVPANVDKVCDVSNEDTELEIASPSFGKYDTFKSCLDLSSQIDDGDSGTEPFSP 540

Query: 541 EFDHQQGFEFSLSNRSVVDIDLEEDISKTTHCDRNDPLQYLEEDNKTEGEDSSAHCRKVS 600
           EFDHQQGFEFSLSNRSVVDIDLEEDISKTTHCDRNDPLQYLEEDNKTEGEDSSAHCRKVS
Sbjct: 541 EFDHQQGFEFSLSNRSVVDIDLEEDISKTTHCDRNDPLQYLEEDNKTEGEDSSAHCRKVS 600

Query: 601 DMSIVGGSHGKTKETASSENEANRPDGLHSTIGTSDKDKLGSIPENSAAEEELNKEEHPK 660
           DMSIVGGSHGKTKETASSENEANRPDGLHSTIGTSDKDKLGSIPENSAAEEELNKEEHPK
Sbjct: 601 DMSIVGGSHGKTKETASSENEANRPDGLHSTIGTSDKDKLGSIPENSAAEEELNKEEHPK 660

Query: 661 LQKGLGFEISLCGHMLRPGMGQASAEEVFQQHLVLEEDFKLSGSSIMKNVNLVVKFDSQY 720
           LQKGLGFEISLCGHMLRPGMGQASAEEVFQQHLVLEEDFKLSGSSIMKNVNLVVKFDSQY
Sbjct: 661 LQKGLGFEISLCGHMLRPGMGQASAEEVFQQHLVLEEDFKLSGSSIMKNVNLVVKFDSQY 720

Query: 721 FLWSKISHIILGKAVFGPNFCTEHIDAIPVEHQETPTSRDSLGLSPSSRRWRLWNIPFRI 780
           FLWSKISHIILGKAVFGPNFCTEHIDAIPVEHQETPTSRDSLGLSPSSRRWRLWNIPFRI
Sbjct: 721 FLWSKISHIILGKAVFGPNFCTEHIDAIPVEHQETPTSRDSLGLSPSSRRWRLWNIPFRI 780

Query: 781 XXXXXXXXXXXXEDIFLDTETVLSPMDEQTPENNINQSPRKQFVRTLIPTSEQVASLNLK 840
                       EDIFLDTETVLSPMDEQTPENNINQSPRKQFVRTLIPTSEQVASLNLK
Sbjct: 781 SRSLQRSNSDSSEDIFLDTETVLSPMDEQTPENNINQSPRKQFVRTLIPTSEQVASLNLK 840

Query: 841 EGQNIVTFSFSTRVLGKQQVEAHIYLWKWNAKIVISDVDGTITR 884
           EGQNIVTFSFSTRVLGKQQVEAHIYLWKWNAKIVISDVDGTITR
Sbjct: 841 EGQNIVTFSFSTRVLGKQQVEAHIYLWKWNAKIVISDVDGTITR 884



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.310    0.130    0.375 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 31,110,326
Number of extensions: 1386637
Number of successful extensions: 2968
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 2941
Number of HSP's successfully gapped: 1
Length of query: 884
Length of database: 17,035,801
Length adjustment: 110
Effective length of query: 774
Effective length of database: 11,292,261
Effective search space: 8740210014
Effective search space used: 8740210014
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 161 (66.6 bits)