Os05g0460600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to GTP cyclohydrolase II/3,4-dihydroxy-2-butanone-4-phosphate synthase- like protein (Fragment).
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Os05g0460600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to GTP cyclohydrolase II/3,4-dihydroxy-2-butanone-4-phosphate synthase- like protein (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 68.22 | 0.388 | 11.7 | -0.687 | 1.92 | -1.03 | 0.721 | 2.22 | -0.219 | 22.5 | 20.44 | 9 | -- | -- |
| 71.82 | 0.398 | 11.8 | -1.08 | 1.92 | -0.921 | 0.241 | -- | -0.328 | 22.5 | 19.49 | 25 | -- | -- |
| 69.75 | 0.392 | 11.7 | -0.827 | 1.91 | -1.03 | -- | 1.55 | -0.252 | 22.5 | 20.44 | 9 | -- | -- |
| 71.99 | 0.398 | 11.8 | -1.08 | 1.92 | -0.942 | -- | -- | -0.327 | 22.5 | 19.5 | 9 | -- | -- |
| 264.66 | 0.758 | 11.6 | -0.508 | -- | -2.19 | -- | 1.84 | -0.0519 | -- | 18.9 | 2 | -- | -- |
| 84.21 | 0.43 | 11.8 | -1.26 | 2.13 | -- | 0.349 | -- | -0.484 | 23.1 | -- | -- | -- | -- |
| 84.73 | 0.431 | 11.8 | -1.28 | 2.12 | -- | -- | -- | -0.485 | 23 | -- | -- | -- | -- |
| 268.31 | 0.763 | 11.7 | -0.789 | -- | -2.2 | -- | -- | -0.124 | -- | 17.96 | 2 | -- | -- |
| 99.14 | 0.466 | 11.7 | -- | 1.84 | -1.53 | -- | -- | -0.146 | 22.3 | 16.18 | 18 | -- | -- |
| 365.75 | 0.894 | 11.7 | -1.23 | -- | -- | -- | -- | -0.469 | -- | -- | -- | -- | -- |
| 127.83 | 0.529 | 11.8 | -- | 2.11 | -- | -- | -- | -0.343 | 23 | -- | -- | -- | -- |
| 283.72 | 0.784 | 11.6 | -- | -- | -2.47 | -- | -- | -0.0101 | -- | 17.35 | 2 | -- | -- |
| 405.67 | 0.94 | 11.7 | -- | -- | -- | -- | -- | -0.332 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 64.16 | temperature | 20 | 10 | > th | dose dependent | sin | 4 | NA |
| 17 | 65.57 | wind | 7 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 19 | 65.67 | wind | 7 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 24 | 65.84 | wind | 5 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 33 | 66.28 | temperature | 30 | 10 | < th | dose dependent | rect. | 2 | 18 |
| 35 | 66.41 | temperature | 30 | 10 | < th | dose dependent | sin | 3 | NA |
| 41 | 66.64 | wind | 1 | 43200 | > th | dose dependent | rect. | 11 | 11 |
| 42 | 66.66 | wind | 3 | 43200 | > th | dose dependent | rect. | 14 | 8 |
| 44 | 66.67 | temperature | 20 | 10 | > th | dose dependent | rect. | 20 | 22 |
| 45 | 66.68 | wind | 9 | 43200 | < th | dose dependent | rect. | 11 | 11 |
| 47 | 66.70 | wind | 1 | 43200 | < th | dose dependent | rect. | 10 | 18 |
| 56 | 66.75 | wind | 1 | 43200 | < th | dose dependent | rect. | 8 | 20 |
| 59 | 66.77 | wind | 5 | 43200 | < th | dose independent | rect. | 14 | 8 |
| 66 | 66.80 | wind | 1 | 43200 | < th | dose independent | rect. | 23 | 3 |
| 72 | 66.82 | wind | 5 | 43200 | > th | dose independent | rect. | 14 | 8 |
| 75 | 66.84 | wind | 5 | 43200 | < th | dose independent | rect. | 15 | 6 |
| 77 | 66.84 | wind | 1 | 43200 | > th | dose dependent | rect. | 11 | 6 |
| 85 | 66.87 | wind | 9 | 43200 | < th | dose dependent | rect. | 11 | 6 |
| 187 | 67.11 | wind | 9 | 43200 | < th | dose dependent | sin | 20 | NA |
| 233 | 67.19 | wind | 1 | 43200 | > th | dose dependent | sin | 20 | NA |
| 294 | 67.30 | temperature | 30 | 10 | < th | dose dependent | rect. | 24 | 20 |
| 295 | 67.31 | wind | 1 | 43200 | > th | dose independent | rect. | 23 | 3 |
| 399 | 67.49 | wind | 5 | 43200 | < th | dose independent | sin | 19 | NA |
| 451 | 67.58 | wind | 5 | 14400 | > th | dose independent | rect. | 10 | 6 |
| 508 | 67.67 | wind | 5 | 43200 | > th | dose independent | sin | 19 | NA |
| 528 | 67.68 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 546 | 67.72 | wind | 5 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 583 | 67.78 | wind | 3 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 607 | 67.80 | humidity | 80 | 43200 | > th | dose independent | rect. | 20 | 4 |
| 626 | 67.83 | wind | 5 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 635 | 67.84 | wind | 7 | 14400 | < th | dose independent | rect. | 5 | 11 |
| 638 | 67.84 | wind | 5 | 14400 | > th | dose dependent | rect. | 5 | 11 |
| 642 | 67.85 | wind | 3 | 43200 | < th | dose dependent | rect. | 9 | 3 |
| 699 | 67.91 | wind | 1 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 714 | 67.93 | wind | 9 | 43200 | < th | dose dependent | rect. | 18 | 3 |
| 734 | 67.96 | wind | 7 | 14400 | > th | dose independent | rect. | 5 | 11 |
| 748 | 67.98 | humidity | 80 | 43200 | < th | dose independent | rect. | 20 | 3 |
| 750 | 67.98 | wind | 5 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 755 | 67.98 | temperature | 20 | 10 | > th | dose dependent | rect. | 20 | 20 |
| 931 | 68.17 | wind | 3 | 43200 | < th | dose dependent | rect. | 11 | 1 |