Os05g0446900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycoside hydrolase, starch-binding domain containing protein.
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Os05g0446900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glycoside hydrolase, starch-binding domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 99.17 | 0.468 | 9.05 | 0.449 | 0.244 | -2.69 | 1.65 | -0.691 | -0.128 | 8.2 | 0.9164 | 1412 | -- | -- |
| 99.35 | 0.464 | 9.06 | 0.389 | 0.246 | -2.53 | 1.61 | -- | -0.141 | 8.12 | 1.045 | 1409 | -- | -- |
| 106.49 | 0.481 | 9.07 | 0.433 | 0.23 | -2.46 | -- | 0.0552 | -0.143 | 5.36 | 1.098 | 1427 | -- | -- |
| 106.37 | 0.48 | 9.06 | 0.45 | 0.222 | -2.48 | -- | -- | -0.139 | 4.89 | 1.137 | 1430 | -- | -- |
| 108.94 | 0.486 | 9.07 | 0.465 | -- | -2.53 | -- | -0.127 | -0.142 | -- | 1.135 | 1430 | -- | -- |
| 173.92 | 0.618 | 8.98 | 1.02 | 0.177 | -- | 1.54 | -- | 0.196 | 7.08 | -- | -- | -- | -- |
| 178.46 | 0.626 | 8.99 | 1.05 | 0.251 | -- | -- | -- | 0.189 | 4.35 | -- | -- | -- | -- |
| 108.94 | 0.486 | 9.06 | 0.457 | -- | -2.49 | -- | -- | -0.135 | -- | 1.147 | 1429 | -- | -- |
| 111.1 | 0.491 | 9.05 | -- | 0.234 | -2.7 | -- | -- | -0.187 | 5.09 | 1.037 | 1430 | -- | -- |
| 181.85 | 0.63 | 8.99 | 1.05 | -- | -- | -- | -- | 0.196 | -- | -- | -- | -- | -- |
| 207.24 | 0.673 | 9.01 | -- | 0.271 | -- | -- | -- | 0.0725 | 4.27 | -- | -- | -- | -- |
| 113.43 | 0.496 | 9.06 | -- | -- | -2.76 | -- | -- | -0.182 | -- | 0.7151 | 1427 | -- | -- |
| 211.21 | 0.678 | 9.02 | -- | -- | -- | -- | -- | 0.0785 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 99.58 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 23 |
| 5 | 99.91 | radiation | 1 | 1440 | < th | dose dependent | rect. | 15 | 15 |
| 7 | 100.20 | radiation | 1 | 1440 | < th | dose dependent | rect. | 13 | 18 |
| 9 | 100.31 | radiation | 1 | 1440 | < th | dose dependent | sin | 14 | NA |
| 14 | 100.45 | radiation | 1 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 15 | 100.50 | wind | 5 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 18 | 100.82 | wind | 5 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 21 | 100.86 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 14 |
| 23 | 100.88 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 16 |
| 29 | 100.97 | radiation | 1 | 1440 | < th | dose dependent | rect. | 2 | 17 |
| 31 | 100.97 | radiation | 1 | 1440 | < th | dose dependent | rect. | 13 | 23 |
| 35 | 100.99 | radiation | 1 | 1440 | < th | dose dependent | rect. | 2 | 19 |
| 37 | 100.99 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 22 |
| 64 | 101.09 | radiation | 1 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 75 | 101.12 | radiation | 1 | 1440 | < th | dose dependent | no | NA | NA |
| 97 | 101.60 | radiation | 1 | 1440 | < th | dose independent | rect. | 15 | 15 |
| 99 | 101.64 | radiation | 1 | 1440 | > th | dose independent | rect. | 15 | 15 |
| 106 | 102.18 | radiation | 1 | 1440 | > th | dose independent | sin | 14 | NA |
| 108 | 102.19 | radiation | 1 | 1440 | < th | dose independent | sin | 14 | NA |
| 109 | 102.25 | radiation | 1 | 1440 | < th | dose independent | rect. | 8 | 22 |
| 110 | 102.27 | radiation | 1 | 1440 | < th | dose independent | rect. | 13 | 17 |
| 112 | 102.34 | radiation | 1 | 1440 | > th | dose independent | rect. | 8 | 22 |
| 115 | 102.42 | radiation | 1 | 1440 | > th | dose independent | rect. | 13 | 17 |
| 127 | 102.65 | radiation | 1 | 1440 | < th | dose dependent | rect. | 15 | 4 |
| 129 | 102.70 | radiation | 1 | 1440 | < th | dose dependent | rect. | 15 | 7 |
| 140 | 102.88 | radiation | 1 | 1440 | < th | dose dependent | rect. | 15 | 12 |
| 195 | 104.44 | wind | 5 | 43200 | > th | dose dependent | rect. | 12 | 10 |
| 199 | 104.55 | radiation | 1 | 1440 | < th | dose dependent | sin | 23 | NA |
| 202 | 104.57 | radiation | 1 | 1440 | < th | dose independent | rect. | 5 | 14 |
| 218 | 104.70 | radiation | 1 | 1440 | < th | dose independent | rect. | 5 | 22 |
| 225 | 104.80 | radiation | 1 | 1440 | < th | dose independent | rect. | 15 | 23 |
| 230 | 104.91 | radiation | 1 | 1440 | > th | dose independent | rect. | 5 | 14 |
| 243 | 104.96 | radiation | 1 | 1440 | > th | dose independent | rect. | 15 | 23 |
| 245 | 104.98 | radiation | 1 | 1440 | < th | dose independent | rect. | 2 | 17 |
| 246 | 104.99 | radiation | 1 | 1440 | < th | dose independent | rect. | 2 | 20 |
| 264 | 105.03 | wind | 9 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 277 | 105.07 | wind | 9 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 278 | 105.07 | radiation | 1 | 1440 | < th | dose independent | rect. | 13 | 23 |
| 283 | 105.10 | radiation | 1 | 1440 | < th | dose independent | rect. | 21 | 22 |
| 296 | 105.13 | radiation | 1 | 1440 | < th | dose independent | no | NA | NA |
| 309 | 105.20 | radiation | 1 | 1440 | > th | dose independent | rect. | 13 | 23 |
| 310 | 105.20 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 11 |
| 318 | 105.23 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 14 |
| 341 | 105.33 | radiation | 1 | 1440 | > th | dose independent | no | NA | NA |
| 426 | 105.63 | wind | 7 | 43200 | < th | dose independent | rect. | 12 | 17 |
| 430 | 105.64 | wind | 5 | 43200 | > th | dose dependent | rect. | 11 | 17 |
| 439 | 105.72 | wind | 7 | 43200 | > th | dose independent | rect. | 12 | 17 |
| 442 | 105.75 | radiation | 1 | 1440 | < th | dose independent | rect. | 15 | 4 |
| 448 | 105.80 | radiation | 1 | 1440 | < th | dose independent | rect. | 15 | 7 |
| 449 | 105.80 | wind | 9 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 458 | 105.87 | radiation | 1 | 1440 | > th | dose independent | rect. | 15 | 4 |
| 471 | 105.90 | wind | 7 | 43200 | < th | dose independent | rect. | 14 | 8 |
| 485 | 106.00 | radiation | 1 | 1440 | < th | dose independent | rect. | 15 | 12 |
| 487 | 106.02 | wind | 5 | 43200 | > th | dose dependent | sin | 18 | NA |
| 488 | 106.03 | wind | 7 | 43200 | < th | dose independent | sin | 18 | NA |
| 531 | 106.22 | wind | 7 | 43200 | > th | dose independent | rect. | 14 | 8 |
| 543 | 106.29 | wind | 7 | 43200 | > th | dose independent | rect. | 13 | 13 |
| 546 | 106.31 | wind | 7 | 43200 | > th | dose independent | sin | 18 | NA |
| 563 | 106.40 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 2 |
| 567 | 106.42 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 5 |
| 585 | 106.48 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 595 | 106.57 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 8 |
| 606 | 106.62 | wind | 7 | 43200 | < th | dose independent | rect. | 8 | 13 |
| 664 | 106.84 | wind | 7 | 43200 | > th | dose independent | rect. | 8 | 13 |
| 704 | 106.99 | wind | 7 | 43200 | < th | dose independent | rect. | 3 | 18 |
| 731 | 107.11 | wind | 5 | 43200 | > th | dose dependent | rect. | 15 | 3 |
| 732 | 107.12 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 13 |
| 733 | 107.12 | wind | 5 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 739 | 107.14 | wind | 7 | 43200 | > th | dose independent | rect. | 3 | 18 |
| 746 | 107.18 | wind | 3 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 770 | 107.29 | wind | 7 | 43200 | > th | dose independent | rect. | 15 | 3 |
| 773 | 107.30 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 11 |
| 779 | 107.33 | radiation | 1 | 1440 | < th | dose independent | sin | 22 | NA |
| 780 | 107.33 | wind | 7 | 43200 | < th | dose independent | rect. | 15 | 3 |
| 822 | 107.49 | wind | 5 | 43200 | > th | dose dependent | rect. | 12 | 4 |
| 830 | 107.52 | radiation | 1 | 1440 | > th | dose independent | sin | 22 | NA |