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Os05g0446300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to G10 protein homolog (EDG-2).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.6 (0.013) R2 : 0.0879
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.181 (0.0273) R2dN8 : 0.114 R2N8 : 0.0879
σ : 0.245
deviance : 27.46
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
13.97 0.176 11.6 0.529 0.295 -0.166 -0.166 -0.66 0.209 0.118 59 4595 -- --
14.43 0.177 11.6 0.534 0.304 -0.186 -0.127 -- 0.196 0.106 55.75 4041 -- --
14.07 0.175 11.6 0.529 0.297 -0.173 -- -0.609 0.203 0.076 58 4380 -- --
14.52 0.177 11.6 0.535 0.309 -0.187 -- -- 0.191 0.135 56 4045 -- --
19.46 0.205 11.6 0.515 -- -0.225 -- -0.423 0.196 -- 60 4624 -- --
15.25 0.183 11.5 0.49 0.29 -- -0.174 -- 0.232 0.137 -- -- -- --
15.38 0.184 11.5 0.497 0.291 -- -- -- 0.233 0.122 -- -- -- --
19.75 0.207 11.5 0.515 -- -0.239 -- -- 0.194 -- 60.01 4629 -- --
15.62 0.184 11.6 -- 0.289 -0.477 -- -- 0.101 0.152 54.98 47520 -- --
20.69 0.213 11.5 0.506 -- -- -- -- 0.237 -- -- -- -- --
21.89 0.219 11.6 -- 0.297 -- -- -- 0.178 0.214 -- -- -- --
20.88 0.213 11.6 -- -- -0.488 -- -- 0.103 -- 54.56 47520 -- --
27.46 0.245 11.6 -- -- -- -- -- 0.181 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 12.99 wind 7 14400 > th dose dependent rect. 18 3
3 13.00 wind 7 14400 > th dose independent rect. 19 3
4 13.00 wind 7 14400 < th dose independent rect. 19 3
25 13.04 wind 9 14400 < th dose independent rect. 20 7
95 13.09 wind 9 14400 < th dose independent rect. 18 7
96 13.09 wind 9 14400 < th dose independent rect. 18 9
97 13.09 wind 9 14400 > th dose dependent rect. 16 8
255 13.21 wind 9 14400 > th dose dependent sin 11 NA
322 13.26 wind 9 14400 < th dose independent rect. 20 14
344 13.28 wind 9 14400 > th dose independent rect. 20 14
376 13.32 wind 9 14400 > th dose independent sin 11 NA
409 13.35 wind 9 14400 < th dose independent sin 11 NA
511 13.46 atmosphere 1005 14400 < th dose independent rect. 21 1
538 13.48 atmosphere 1005 14400 < th dose independent rect. 8 1
561 13.50 atmosphere 1005 14400 > th dose independent rect. 9 1
598 13.53 atmosphere 1005 14400 < th dose independent rect. 8 4
617 13.55 atmosphere 995 14400 < th dose independent rect. 16 1
629 13.55 atmosphere 995 14400 < th dose dependent rect. 16 1
672 13.57 atmosphere 1010 14400 < th dose dependent rect. 23 1
676 13.58 atmosphere 1005 14400 < th dose independent rect. 11 1
706 13.59 atmosphere 995 14400 > th dose independent rect. 16 2
753 13.61 atmosphere 995 14400 > th dose independent rect. 16 4
803 13.63 wind 1 14400 > th dose independent rect. 24 1
804 13.63 atmosphere 1005 14400 > th dose independent rect. 21 1
816 13.63 atmosphere 1005 14400 < th dose independent rect. 8 16
817 13.63 atmosphere 1005 14400 < th dose independent rect. 20 16
867 13.64 atmosphere 1005 14400 < th dose independent rect. 20 9
906 13.64 atmosphere 1005 14400 < th dose independent rect. 8 21
935 13.65 atmosphere 995 14400 > th dose independent rect. 12 7
971 13.65 atmosphere 1005 14400 < th dose independent rect. 4 20