Os05g0440300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to S1 self-incompatibility locus-linked G221 protein (Fragment).
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Os05g0440300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to S1 self-incompatibility locus-linked G221 protein (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 156.02 | 0.587 | 5.57 | 0.925 | 0.92 | -5.51 | 1.78 | -6.46 | 0.738 | 1.92 | 23.93 | 4344 | -- | -- |
| 177.08 | 0.62 | 5.72 | 0.719 | 0.703 | -3.73 | 2.26 | -- | 0.842 | 2.26 | 28.95 | 2599 | -- | -- |
| 165.41 | 0.599 | 5.59 | 1.05 | 0.819 | -5.43 | -- | -6.29 | 0.738 | 2.9 | 24.2 | 3708 | -- | -- |
| 183.98 | 0.632 | 5.74 | 0.551 | 0.796 | -4.03 | -- | -- | 0.662 | 4.24 | 28.84 | 2355 | -- | -- |
| 203.38 | 0.664 | 5.58 | 1.05 | -- | -5.42 | -- | -6.21 | 0.741 | -- | 24.55 | 3885 | -- | -- |
| 498.22 | 1.05 | 5.53 | 2.13 | 1.08 | -- | 1.82 | -- | 1.65 | 2.12 | -- | -- | -- | -- |
| 510.48 | 1.06 | 5.54 | 2.08 | 1.09 | -- | -- | -- | 1.64 | 2.33 | -- | -- | -- | -- |
| 208.67 | 0.673 | 5.78 | 0.351 | -- | -4.29 | -- | -- | 0.564 | -- | 28.69 | 2558 | -- | -- |
| 187.53 | 0.638 | 5.78 | -- | 0.686 | -4.4 | -- | -- | 0.524 | 3.68 | 28.22 | 2408 | -- | -- |
| 580.31 | 1.13 | 5.53 | 2.13 | -- | -- | -- | -- | 1.67 | -- | -- | -- | -- | -- |
| 624.61 | 1.17 | 5.59 | -- | 1.13 | -- | -- | -- | 1.41 | 2.37 | -- | -- | -- | -- |
| 211.24 | 0.677 | 5.79 | -- | -- | -4.46 | -- | -- | 0.48 | -- | 28.34 | 2571 | -- | -- |
| 699.62 | 1.23 | 5.58 | -- | -- | -- | -- | -- | 1.43 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 148.11 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 8 |
| 10 | 149.11 | temperature | 25 | 4320 | < th | dose dependent | rect. | 17 | 13 |
| 20 | 149.52 | temperature | 25 | 4320 | < th | dose dependent | rect. | 2 | 1 |
| 26 | 149.64 | temperature | 25 | 4320 | < th | dose dependent | rect. | 1 | 4 |
| 41 | 150.32 | temperature | 10 | 4320 | > th | dose dependent | rect. | 2 | 3 |
| 45 | 150.40 | temperature | 25 | 4320 | < th | dose dependent | sin | 12 | NA |
| 120 | 152.69 | temperature | 10 | 4320 | > th | dose dependent | rect. | 22 | 8 |
| 393 | 158.95 | temperature | 25 | 4320 | < th | dose dependent | no | NA | NA |
| 460 | 160.85 | temperature | 25 | 4320 | < th | dose dependent | rect. | 4 | 23 |
| 558 | 163.97 | temperature | 10 | 4320 | > th | dose dependent | sin | 11 | NA |