Os05g0437500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Yip1 domain containing protein.
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Os05g0437500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Yip1 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27 | 0.244 | 9.85 | 1.25 | 0.305 | -0.349 | -0.349 | -2.11 | 0.629 | 4.17 | 0.5507 | 4776 | -- | -- |
| 28.43 | 0.248 | 9.87 | 1.28 | 0.304 | -0.567 | -0.37 | -- | 0.644 | 4.2 | 1.209 | 2456 | -- | -- |
| 27.31 | 0.243 | 9.85 | 1.26 | 0.304 | -0.3 | -- | -2 | 0.631 | 4.31 | 0.6742 | 4798 | -- | -- |
| 28.55 | 0.249 | 9.87 | 1.31 | 0.326 | -0.619 | -- | -- | 0.634 | 4.27 | 1.001 | 1842 | -- | -- |
| 32.27 | 0.265 | 9.85 | 1.28 | -- | -0.28 | -- | -2 | 0.636 | -- | 0.7546 | 4850 | -- | -- |
| 33.54 | 0.271 | 9.88 | 1.44 | 0.315 | -- | -0.252 | -- | 0.598 | 4.16 | -- | -- | -- | -- |
| 33.71 | 0.272 | 9.88 | 1.44 | 0.314 | -- | -- | -- | 0.6 | 4.27 | -- | -- | -- | -- |
| 33.55 | 0.27 | 9.87 | 1.28 | -- | -0.62 | -- | -- | 0.653 | -- | 1.158 | 2260 | -- | -- |
| 65.64 | 0.377 | 9.87 | -- | 0.273 | -1.19 | -- | -- | 0.588 | 4.23 | 2.289 | 2257 | -- | -- |
| 39.02 | 0.292 | 9.88 | 1.46 | -- | -- | -- | -- | 0.608 | -- | -- | -- | -- | -- |
| 88.59 | 0.44 | 9.92 | -- | 0.341 | -- | -- | -- | 0.439 | 4.18 | -- | -- | -- | -- |
| 70.65 | 0.391 | 9.89 | -- | -- | -1.21 | -- | -- | 0.559 | -- | 7.849 | 2260 | -- | -- |
| 94.9 | 0.455 | 9.92 | -- | -- | -- | -- | -- | 0.447 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 25.75 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 4 |
| 4 | 25.79 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 4 |
| 5 | 25.80 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 4 |
| 7 | 25.80 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 4 |
| 11 | 25.84 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 12 | 8 |
| 13 | 25.85 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 7 |
| 15 | 25.85 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 7 |
| 45 | 26.05 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 5 |
| 46 | 26.05 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 5 |
| 47 | 26.05 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 5 |
| 58 | 26.09 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 21 | NA |
| 59 | 26.09 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 21 | NA |
| 62 | 26.09 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 21 | NA |
| 94 | 26.17 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 2 |
| 101 | 26.18 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 15 | 2 |
| 104 | 26.19 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 2 |
| 106 | 26.19 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 2 |
| 107 | 26.19 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 7 |
| 111 | 26.20 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 5 |
| 134 | 26.26 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 12 | 12 |
| 135 | 26.26 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 12 | 12 |
| 138 | 26.26 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 12 | 12 |
| 156 | 26.28 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 15 |
| 158 | 26.28 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 15 |
| 162 | 26.28 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 15 |
| 163 | 26.29 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 171 | 26.29 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 3 | 17 |
| 180 | 26.30 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 22 | 22 |
| 186 | 26.31 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 17 |
| 192 | 26.32 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 17 |
| 195 | 26.32 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 17 |
| 197 | 26.32 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 23 | 18 |
| 232 | 26.35 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 2 | 15 |
| 262 | 26.37 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 3 | 18 |
| 269 | 26.38 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 3 | 18 |
| 273 | 26.38 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 3 | 18 |
| 286 | 26.39 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 3 | 20 |
| 288 | 26.39 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 1 | NA |
| 293 | 26.39 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 3 | 20 |
| 342 | 26.44 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 16 | 4 |
| 385 | 26.48 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 2 | 15 |
| 395 | 26.49 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 23 | 18 |
| 405 | 26.50 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 2 | 15 |
| 408 | 26.50 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 23 | 18 |
| 410 | 26.50 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 2 | 15 |
| 412 | 26.50 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 23 | 18 |
| 426 | 26.52 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 433 | 26.53 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 462 | 26.55 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 5 |
| 473 | 26.55 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 15 |
| 479 | 26.56 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 506 | 26.58 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 19 |
| 535 | 26.60 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 21 |
| 537 | 26.61 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 562 | 26.62 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 3 | 21 |
| 617 | 26.64 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 23 |
| 649 | 26.66 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 22 | 22 |
| 675 | 26.67 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 22 | 22 |
| 678 | 26.67 | precipitation | 0.1 | 14400 | > th | dose dependent | no | NA | NA |
| 687 | 26.67 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 22 | 22 |
| 712 | 26.68 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 15 | 23 |
| 754 | 26.71 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 23 |
| 764 | 26.71 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 23 |
| 837 | 26.76 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 848 | 26.77 | precipitation | 0.1 | 14400 | > th | dose independent | no | NA | NA |
| 849 | 26.77 | precipitation | 0.1 | 14400 | < th | dose independent | no | NA | NA |
| 852 | 26.77 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 23 |
| 854 | 26.77 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 23 |
| 856 | 26.77 | precipitation | 0.1 | 14400 | < th | dose dependent | no | NA | NA |
| 859 | 26.77 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 19 | 23 |
| 861 | 26.77 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 23 |
| 869 | 26.78 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 12 |
| 906 | 26.81 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 15 | 13 |
| 942 | 26.84 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 957 | 26.85 | precipitation | 0.1 | 4320 | < th | dose independent | sin | 3 | NA |
| 969 | 26.85 | precipitation | 0.1 | 4320 | < th | dose dependent | sin | 3 | NA |