Os05g0426800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0426800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 93.28 | 0.454 | 3.1 | -0.255 | 0.364 | 0.444 | 0.736 | 0.139 | 0.0789 | 5.7 | 32.55 | 1081 | -- | -- |
| 93.27 | 0.45 | 3.1 | -0.269 | 0.357 | 0.456 | 0.753 | -- | 0.0784 | 5.69 | 32.8 | 1067 | -- | -- |
| 94.59 | 0.453 | 3.1 | -0.24 | 0.366 | 0.438 | -- | 0.217 | 0.0754 | 5.58 | 32.7 | 1080 | -- | -- |
| 94.59 | 0.453 | 3.11 | -0.273 | 0.366 | 0.465 | -- | -- | 0.0741 | 5.57 | 32.8 | 1070 | -- | -- |
| 101.54 | 0.469 | 3.1 | -0.208 | -- | 0.436 | -- | 0.421 | 0.0898 | -- | 32.3 | 1116 | -- | -- |
| 103.28 | 0.476 | 3.12 | -0.166 | 0.394 | -- | 0.772 | -- | 0.00132 | 5.06 | -- | -- | -- | -- |
| 104.78 | 0.479 | 3.12 | -0.167 | 0.398 | -- | -- | -- | -0.00247 | 4.94 | -- | -- | -- | -- |
| 101.57 | 0.469 | 3.11 | -0.268 | -- | 0.483 | -- | -- | 0.0925 | -- | 32.8 | 1086 | -- | -- |
| 96.47 | 0.457 | 3.1 | -- | 0.366 | 0.435 | -- | -- | 0.0985 | 5.55 | 32.9 | 1067 | -- | -- |
| 113.13 | 0.497 | 3.13 | -0.153 | -- | -- | -- | -- | 0.00776 | -- | -- | -- | -- | -- |
| 105.52 | 0.481 | 3.12 | -- | 0.395 | -- | -- | -- | 0.0161 | 4.96 | -- | -- | -- | -- |
| 103.36 | 0.474 | 3.1 | -- | -- | 0.455 | -- | -- | 0.11 | -- | 32.9 | 1082 | -- | -- |
| 113.74 | 0.498 | 3.12 | -- | -- | -- | -- | -- | 0.0247 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 85.20 | wind | 1 | 90 | < th | dose independent | rect. | 4 | 1 |
| 2 | 85.58 | wind | 1 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 3 | 85.61 | temperature | 30 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 32 | 87.11 | humidity | 70 | 720 | < th | dose independent | rect. | 19 | 1 |
| 47 | 87.60 | humidity | 70 | 720 | < th | dose dependent | rect. | 19 | 1 |
| 63 | 87.85 | humidity | 50 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 69 | 87.97 | humidity | 50 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 91 | 88.39 | temperature | 25 | 720 | > th | dose dependent | rect. | 21 | 2 |
| 92 | 88.43 | temperature | 20 | 90 | > th | dose dependent | rect. | 3 | 3 |
| 99 | 88.71 | temperature | 30 | 720 | > th | dose independent | rect. | 18 | 1 |
| 107 | 88.71 | humidity | 70 | 720 | > th | dose independent | rect. | 19 | 8 |
| 116 | 88.89 | temperature | 20 | 10 | > th | dose dependent | rect. | 2 | 5 |
| 126 | 89.18 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 134 | 89.42 | temperature | 20 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 157 | 89.64 | humidity | 90 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 161 | 89.69 | temperature | 20 | 90 | > th | dose independent | rect. | 4 | 1 |
| 166 | 89.75 | wind | 3 | 10 | < th | dose dependent | rect. | 2 | 4 |
| 191 | 90.01 | humidity | 70 | 1440 | > th | dose independent | rect. | 19 | 1 |
| 196 | 90.04 | humidity | 70 | 1440 | > th | dose independent | rect. | 19 | 4 |
| 200 | 90.05 | wind | 3 | 90 | < th | dose dependent | rect. | 2 | 4 |
| 206 | 90.13 | humidity | 90 | 90 | > th | dose independent | rect. | 4 | 1 |
| 210 | 90.18 | temperature | 20 | 90 | > th | dose independent | rect. | 3 | 3 |
| 248 | 90.64 | temperature | 20 | 30 | > th | dose independent | rect. | 2 | 5 |
| 250 | 90.66 | wind | 3 | 10 | < th | dose dependent | rect. | 4 | 2 |
| 261 | 90.82 | wind | 1 | 10 | > th | dose independent | sin | 4 | NA |
| 290 | 90.93 | humidity | 70 | 720 | > th | dose independent | rect. | 18 | 14 |
| 310 | 91.09 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 1 |
| 348 | 91.31 | temperature | 25 | 90 | < th | dose independent | rect. | 4 | 1 |
| 361 | 91.39 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 10 |
| 375 | 91.47 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 6 |
| 456 | 91.74 | wind | 3 | 10 | < th | dose dependent | rect. | 2 | 9 |
| 467 | 91.81 | radiation | 1 | 720 | > th | dose independent | rect. | 18 | 11 |
| 483 | 91.90 | atmosphere | 995 | 4320 | > th | dose independent | rect. | 5 | 1 |
| 512 | 92.07 | radiation | 1 | 720 | > th | dose independent | rect. | 18 | 1 |
| 539 | 92.12 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 8 |
| 582 | 92.24 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 12 |
| 590 | 92.27 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 10 |
| 593 | 92.31 | humidity | 90 | 10 | > th | dose independent | rect. | 4 | 2 |
| 609 | 92.39 | wind | 1 | 90 | < th | dose independent | rect. | 4 | 7 |
| 633 | 92.49 | radiation | 1 | 720 | > th | dose dependent | rect. | 18 | 11 |
| 636 | 92.50 | wind | 1 | 30 | < th | dose independent | rect. | 2 | 9 |
| 637 | 92.50 | wind | 1 | 10 | < th | dose independent | rect. | 2 | 11 |
| 642 | 92.52 | wind | 1 | 10 | < th | dose independent | rect. | 4 | 9 |
| 680 | 92.59 | humidity | 90 | 10 | > th | dose dependent | rect. | 4 | 2 |
| 686 | 92.61 | temperature | 30 | 720 | < th | dose dependent | rect. | 18 | 7 |
| 706 | 92.67 | atmosphere | 1015 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 728 | 92.73 | wind | 7 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 730 | 92.73 | temperature | 10 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 733 | 92.73 | temperature | 30 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 737 | 92.73 | humidity | 50 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 747 | 92.73 | atmosphere | 1015 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 748 | 92.73 | radiation | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 758 | 92.73 | temperature | 10 | 1440 | > th | dose independent | rect. | 6 | 23 |
| 762 | 92.75 | atmosphere | 1005 | 90 | > th | dose independent | rect. | 4 | 1 |
| 798 | 92.88 | temperature | 30 | 720 | < th | dose dependent | rect. | 18 | 5 |
| 811 | 92.91 | wind | 9 | 90 | > th | dose dependent | rect. | 14 | 5 |
| 822 | 92.94 | wind | 9 | 90 | > th | dose independent | rect. | 14 | 5 |
| 835 | 92.96 | wind | 9 | 90 | > th | dose dependent | rect. | 14 | 9 |
| 864 | 93.00 | wind | 9 | 90 | > th | dose independent | rect. | 14 | 9 |
| 907 | 93.04 | radiation | 1 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 969 | 93.12 | radiation | 20 | 14400 | < th | dose independent | rect. | 3 | 3 |