FiT-DB / Search/ Help/ Sample detail

Os05g0420500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.42 (0.0194) R2 : 0.474
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.951 (0.0484) R2dC : 0.449 R2C : 0.435
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.208 (0.0407) R2dN8 : 0.0389 R2N8 : 0.0251
σ : 0.364
deviance : 60.69
__
_____
C
peak time of C : 20.8
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
51.79 0.338 8.41 0.0574 0.949 0.686 -0.239 0.928 0.156 20.7 10.03 4488 -- --
52.11 0.339 8.45 -0.0236 1.02 0.903 -0.0768 -- 0.0982 21.8 10.03 4488 -- --
51.98 0.336 8.41 0.0678 0.949 0.684 -- 0.938 0.157 20.7 9.787 4479 -- --
52.13 0.338 8.45 -0.0217 1.02 0.908 -- -- 0.0976 21.8 9.787 4479 -- --
83.88 0.427 8.44 -0.17 -- 1.28 -- 0.0613 0.00164 -- 15.36 653 -- --
59.91 0.363 8.42 0.148 0.952 -- -0.212 -- 0.225 20.8 -- -- -- --
60.06 0.363 8.42 0.154 0.951 -- -- -- 0.225 20.8 -- -- -- --
83.79 0.426 8.44 -0.173 -- 1.32 -- -- 0.0173 -- 14.8 672 -- --
52.14 0.338 8.45 -- 1.02 0.897 -- -- 0.101 21.8 -0.187 6028 -- --
111.49 0.493 8.4 0.153 -- -- -- -- 0.218 -- -- -- -- --
60.69 0.364 8.42 -- 0.951 -- -- -- 0.208 20.8 -- -- -- --
84.05 0.427 8.42 -- -- 0.977 -- -- 0.117 -- 23.95 718 -- --
112.11 0.494 8.4 -- -- -- -- -- 0.2 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 48.91 temperature 30.0 90 < th dose dependent sin 5 NA
3 49.33 temperature 15.0 90 > th dose dependent sin 4 NA
13 49.65 temperature 10.0 270 > th dose dependent sin 7 NA
43 50.30 wind 1.0 14400 > th dose independent rect. 10 2
51 50.43 temperature 15.0 90 > th dose dependent rect. 7 22
52 50.45 radiation 10.0 14400 > th dose independent rect. 9 1
57 50.48 temperature 30.0 270 < th dose dependent rect. 1 10
58 50.49 radiation 30.0 4320 > th dose independent rect. 15 1
59 50.49 temperature 30.0 90 < th dose dependent rect. 5 14
60 50.52 wind 1.0 14400 < th dose independent rect. 10 2
61 50.56 temperature 25.0 4320 < th dose independent rect. 23 1
78 50.62 precipitation 0.1 43200 > th dose dependent rect. 20 11
82 50.66 precipitation 0.1 43200 > th dose independent rect. 22 2
83 50.66 precipitation 0.1 43200 > th dose dependent rect. 22 2
85 50.67 precipitation 0.1 43200 > th dose dependent rect. 20 16
90 50.70 precipitation 0.1 43200 > th dose dependent rect. 17 20
93 50.71 precipitation 0.1 43200 > th dose dependent rect. 20 22
94 50.72 precipitation 0.1 43200 < th dose independent rect. 22 2
95 50.72 precipitation 0.1 43200 > th dose independent rect. 17 19
96 50.72 precipitation 0.1 43200 < th dose dependent rect. 22 2
99 50.74 precipitation 0.1 43200 > th dose independent rect. 20 11
100 50.74 precipitation 0.1 43200 < th dose independent rect. 20 11
101 50.74 precipitation 0.1 43200 < th dose independent rect. 17 19
102 50.74 precipitation 0.1 43200 < th dose dependent rect. 20 11
103 50.74 precipitation 0.1 43200 < th dose dependent rect. 17 19
104 50.76 temperature 25.0 1440 > th dose independent rect. 7 2
105 50.76 temperature 25.0 1440 < th dose independent rect. 7 2
107 50.76 wind 1.0 43200 < th dose dependent rect. 3 9
108 50.77 precipitation 0.1 43200 > th dose independent rect. 17 14
110 50.78 temperature 30.0 270 < th dose dependent rect. 23 12
114 50.79 precipitation 0.1 43200 < th dose independent rect. 17 14
115 50.79 precipitation 0.1 43200 < th dose dependent rect. 17 14
127 50.83 temperature 25.0 4320 > th dose independent rect. 22 2
128 50.83 precipitation 0.1 43200 > th dose independent rect. 20 16
129 50.83 precipitation 0.1 43200 < th dose independent rect. 20 16
133 50.83 precipitation 0.1 43200 < th dose dependent rect. 20 16
136 50.84 precipitation 0.1 43200 < th dose independent rect. 16 16
141 50.84 precipitation 0.1 43200 < th dose dependent rect. 16 16
154 50.86 temperature 15.0 270 > th dose dependent rect. 23 14
186 50.93 precipitation 0.1 43200 > th dose independent sin 11 NA
193 50.94 precipitation 0.1 43200 < th dose independent sin 11 NA
197 50.94 precipitation 0.1 43200 < th dose dependent sin 11 NA
217 50.97 precipitation 0.1 43200 > th dose dependent sin 11 NA
222 50.98 precipitation 0.1 43200 > th dose dependent rect. 6 12
244 51.01 temperature 30.0 1440 < th dose dependent rect. 8 1
252 51.02 precipitation 0.1 43200 > th dose independent rect. 20 13
264 51.04 precipitation 0.1 43200 < th dose independent rect. 20 13
266 51.04 precipitation 0.1 43200 < th dose dependent rect. 20 13
268 51.04 precipitation 0.1 43200 > th dose dependent rect. 5 14
272 51.05 temperature 15.0 1440 > th dose dependent rect. 8 1
295 51.07 precipitation 0.1 43200 < th dose independent rect. 20 22
298 51.07 radiation 10.0 14400 < th dose dependent rect. 9 1
304 51.07 precipitation 0.1 43200 < th dose dependent rect. 20 22
309 51.08 precipitation 0.1 43200 > th dose independent rect. 20 22
313 51.09 atmosphere 1000.0 43200 < th dose independent rect. 18 1
347 51.12 temperature 15.0 270 > th dose dependent rect. 17 22
372 51.15 precipitation 0.1 43200 > th dose independent rect. 10 1
380 51.15 precipitation 0.1 43200 > th dose dependent rect. 10 1
394 51.17 atmosphere 1000.0 43200 > th dose independent rect. 18 1
411 51.18 precipitation 0.1 43200 > th dose dependent rect. 5 19
416 51.19 precipitation 0.1 43200 < th dose independent rect. 10 1
422 51.19 wind 1.0 43200 < th dose dependent sin 5 NA
423 51.19 precipitation 0.1 43200 < th dose dependent rect. 10 1
424 51.19 precipitation 0.1 43200 > th dose dependent rect. 20 4
425 51.19 temperature 30.0 90 < th dose dependent rect. 5 8
429 51.19 precipitation 0.1 43200 > th dose dependent rect. 5 22
432 51.20 precipitation 0.1 43200 < th dose independent rect. 20 1
435 51.20 precipitation 0.1 43200 < th dose dependent rect. 20 1
448 51.21 precipitation 0.1 43200 > th dose dependent rect. 10 22
449 51.21 precipitation 0.1 43200 > th dose dependent rect. 2 23
454 51.22 precipitation 0.1 43200 > th dose independent rect. 20 1
456 51.22 wind 1.0 43200 > th dose independent rect. 23 11
460 51.22 temperature 30.0 270 < th dose dependent rect. 2 16
469 51.23 precipitation 0.1 43200 > th dose dependent no NA NA
478 51.24 radiation 10.0 14400 < th dose dependent rect. 15 21
495 51.26 precipitation 0.1 43200 > th dose independent rect. 3 21
500 51.26 temperature 25.0 4320 > th dose dependent rect. 9 1
512 51.27 precipitation 0.1 43200 < th dose independent rect. 7 6
513 51.27 radiation 10.0 14400 < th dose independent rect. 16 14
515 51.27 precipitation 0.1 43200 < th dose independent rect. 3 21
519 51.27 precipitation 0.1 43200 < th dose dependent rect. 7 6
522 51.27 precipitation 0.1 43200 < th dose dependent rect. 3 21
525 51.28 precipitation 0.1 43200 > th dose independent rect. 7 6
532 51.28 precipitation 0.1 43200 > th dose dependent rect. 7 6
547 51.29 wind 1.0 14400 < th dose dependent rect. 10 2
569 51.30 precipitation 0.1 43200 > th dose dependent rect. 23 23
594 51.32 temperature 25.0 4320 < th dose independent rect. 20 14
607 51.32 temperature 15.0 10 > th dose dependent rect. 7 23
641 51.35 precipitation 0.1 43200 > th dose independent rect. 10 22
642 51.35 precipitation 0.1 43200 < th dose independent rect. 10 22
644 51.35 precipitation 0.1 43200 > th dose independent rect. 22 23
647 51.35 precipitation 0.1 43200 < th dose independent rect. 22 23
660 51.35 precipitation 0.1 43200 < th dose dependent rect. 10 22
664 51.35 precipitation 0.1 43200 < th dose dependent rect. 22 23
668 51.36 precipitation 0.1 43200 > th dose independent rect. 6 12
669 51.36 precipitation 0.1 43200 < th dose independent rect. 6 12
677 51.36 precipitation 0.1 43200 < th dose dependent rect. 6 12
740 51.39 precipitation 0.1 43200 > th dose independent no NA NA
741 51.39 precipitation 0.1 43200 < th dose independent no NA NA
742 51.39 precipitation 0.1 43200 < th dose independent rect. 9 3
756 51.39 precipitation 0.1 43200 < th dose dependent no NA NA
757 51.39 precipitation 0.1 43200 < th dose dependent rect. 9 3
769 51.40 wind 1.0 1440 > th dose independent rect. 4 3
780 51.40 radiation 10.0 4320 > th dose dependent rect. 16 15
791 51.41 precipitation 0.1 43200 > th dose dependent sin 1 NA
822 51.42 wind 1.0 43200 < th dose dependent rect. 1 18
823 51.42 temperature 25.0 270 < th dose dependent rect. 23 20
832 51.43 precipitation 0.1 43200 > th dose independent rect. 9 3
839 51.43 precipitation 0.1 43200 > th dose independent rect. 5 16
846 51.43 precipitation 0.1 43200 > th dose dependent rect. 9 3
855 51.44 radiation 10.0 14400 > th dose independent rect. 16 1
858 51.44 temperature 25.0 4320 > th dose independent rect. 20 14
860 51.44 precipitation 0.1 43200 < th dose independent rect. 5 16
875 51.44 temperature 25.0 1440 > th dose dependent rect. 23 10
876 51.44 temperature 25.0 4320 > th dose dependent rect. 21 13
880 51.44 precipitation 0.1 43200 < th dose dependent rect. 5 16
881 51.44 temperature 25.0 270 < th dose dependent rect. 1 19
889 51.45 wind 1.0 43200 < th dose independent sin 7 NA
891 51.45 radiation 10.0 14400 < th dose independent rect. 16 4
924 51.46 wind 1.0 43200 < th dose independent rect. 23 12
935 51.46 temperature 15.0 90 > th dose dependent rect. 23 17
968 51.48 temperature 30.0 4320 < th dose independent rect. 11 2