Os05g0411300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0411300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 76.79 | 0.412 | 11.6 | 0.199 | 0.531 | 0.402 | -0.796 | -0.354 | -0.0896 | 3.47 | 19.48 | 840 | -- | -- |
| 77.05 | 0.409 | 11.6 | 0.243 | 0.527 | 0.462 | -0.846 | -- | -0.0798 | 3.45 | 19.41 | 846 | -- | -- |
| 78.63 | 0.413 | 11.6 | 0.185 | 0.529 | 0.396 | -- | -0.505 | -0.0862 | 3.54 | 19.47 | 906 | -- | -- |
| 79.25 | 0.415 | 11.6 | 0.25 | 0.523 | 0.485 | -- | -- | -0.0822 | 3.5 | 19.4 | 905 | -- | -- |
| 93.5 | 0.45 | 11.6 | 0.163 | -- | 0.498 | -- | -0.463 | -0.102 | -- | 19.63 | 1024 | -- | -- |
| 81.25 | 0.423 | 11.5 | 0.41 | 0.552 | -- | -0.877 | -- | 0.000172 | 3.1 | -- | -- | -- | -- |
| 83.77 | 0.429 | 11.5 | 0.429 | 0.55 | -- | -- | -- | 0.0052 | 3.22 | -- | -- | -- | -- |
| 93.91 | 0.451 | 11.6 | 0.231 | -- | 0.582 | -- | -- | -0.0863 | -- | 19.56 | 1012 | -- | -- |
| 79.6 | 0.416 | 11.6 | -- | 0.514 | 0.673 | -- | -- | -0.13 | 3.44 | 18.35 | 2398 | -- | -- |
| 100.92 | 0.469 | 11.5 | 0.452 | -- | -- | -- | -- | 0.0196 | -- | -- | -- | -- | -- |
| 88.62 | 0.44 | 11.5 | -- | 0.558 | -- | -- | -- | -0.0426 | 3.22 | -- | -- | -- | -- |
| 94.15 | 0.452 | 11.6 | -- | -- | 0.78 | -- | -- | -0.122 | -- | 18.4 | 2423 | -- | -- |
| 106.32 | 0.481 | 11.5 | -- | -- | -- | -- | -- | -0.0305 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 71.99 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 2 | 10 |
| 9 | 72.45 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 1 | 4 |
| 19 | 72.87 | temperature | 20.0 | 720 | > th | dose independent | rect. | 2 | 3 |
| 28 | 73.09 | temperature | 25.0 | 270 | > th | dose independent | rect. | 1 | 11 |
| 35 | 73.23 | temperature | 30.0 | 10 | < th | dose independent | rect. | 16 | 1 |
| 52 | 73.40 | humidity | 50.0 | 30 | > th | dose independent | rect. | 16 | 1 |
| 53 | 73.40 | radiation | 10.0 | 10 | < th | dose independent | rect. | 16 | 1 |
| 56 | 73.44 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 16 | 1 |
| 58 | 73.45 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 16 | 1 |
| 59 | 73.45 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 19 | 21 |
| 67 | 73.49 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 16 | 1 |
| 79 | 73.60 | temperature | 25.0 | 10 | > th | dose dependent | sin | 5 | NA |
| 81 | 73.60 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 24 | 8 |
| 85 | 73.62 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 4 | 12 |
| 98 | 73.69 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 6 | 10 |
| 102 | 73.70 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 16 | 1 |
| 111 | 73.72 | temperature | 25.0 | 270 | > th | dose independent | rect. | 6 | 6 |
| 129 | 73.79 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 16 | 1 |
| 132 | 73.80 | temperature | 20.0 | 720 | < th | dose independent | rect. | 1 | 6 |
| 149 | 73.85 | wind | 5.0 | 30 | > th | dose dependent | rect. | 16 | 1 |
| 160 | 73.88 | wind | 7.0 | 30 | > th | dose independent | rect. | 16 | 1 |
| 231 | 74.03 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 5 | 2 |
| 390 | 74.41 | temperature | 30.0 | 270 | < th | dose dependent | sin | 6 | NA |
| 491 | 74.57 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 17 | 23 |
| 502 | 74.59 | temperature | 25.0 | 720 | < th | dose dependent | sin | 8 | NA |
| 609 | 74.74 | temperature | 20.0 | 720 | < th | dose independent | rect. | 5 | 1 |
| 622 | 74.76 | temperature | 20.0 | 720 | > th | dose independent | sin | 7 | NA |
| 629 | 74.77 | temperature | 20.0 | 720 | < th | dose independent | sin | 7 | NA |
| 774 | 75.00 | wind | 9.0 | 10 | < th | dose independent | rect. | 17 | 23 |
| 922 | 75.24 | humidity | 80.0 | 10 | < th | dose independent | rect. | 16 | 1 |
| 934 | 75.26 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 16 | 1 |
| 946 | 75.28 | temperature | 25.0 | 10 | > th | dose independent | rect. | 16 | 1 |
| 953 | 75.29 | radiation | 1.0 | 10 | > th | dose independent | rect. | 16 | 1 |
| 978 | 75.32 | wind | 1.0 | 10 | > th | dose independent | rect. | 16 | 1 |
| 979 | 75.32 | wind | 9.0 | 10 | < th | dose independent | rect. | 16 | 1 |
| 980 | 75.32 | temperature | 10.0 | 10 | > th | dose independent | rect. | 16 | 1 |
| 983 | 75.32 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 16 | 1 |
| 985 | 75.32 | radiation | 40.0 | 10 | < th | dose independent | rect. | 16 | 1 |
| 986 | 75.32 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 16 | 1 |
| 987 | 75.32 | temperature | 10.0 | 10 | > th | dose independent | rect. | 17 | 23 |
| 989 | 75.32 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 16 | 1 |