Os05g0409300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Cysteine protease inhibitor.
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Os05g0409300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Cysteine protease inhibitor.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26.78 | 0.243 | 14.2 | -0.334 | 0.778 | 0.124 | 0.384 | -4.49 | 0.131 | 0.379 | 26.4 | 3703 | -- | -- |
| 27.98 | 0.246 | 14 | 0.677 | 0.763 | -0.443 | 0.31 | -- | 0.494 | 0.299 | 32.59 | 13290 | -- | -- |
| 27.36 | 0.244 | 14.2 | -0.349 | 0.773 | 0.148 | -- | -4.64 | 0.137 | 0.375 | 26.8 | 3581 | -- | -- |
| 27.45 | 0.244 | 14 | 0.742 | 0.794 | -0.449 | -- | -- | 0.51 | 0.172 | 32.07 | 17350 | -- | -- |
| 55.63 | 0.349 | 14.1 | 0.562 | -- | -0.79 | -- | -0.554 | 0.315 | -- | 26.49 | 3280 | -- | -- |
| 34.04 | 0.274 | 14.1 | 0.495 | 0.752 | -- | 0.254 | -- | 0.302 | 0.292 | -- | -- | -- | -- |
| 34.32 | 0.274 | 14.1 | 0.485 | 0.751 | -- | -- | -- | 0.3 | 0.284 | -- | -- | -- | -- |
| 55.72 | 0.349 | 14.1 | 0.61 | -- | -0.833 | -- | -- | 0.326 | -- | 26.49 | 3280 | -- | -- |
| 37.73 | 0.286 | 14.1 | -- | 0.772 | -0.315 | -- | -- | 0.367 | 0.342 | 32.26 | 17678 | -- | -- |
| 69.82 | 0.39 | 14.1 | 0.51 | -- | -- | -- | -- | 0.312 | -- | -- | -- | -- | -- |
| 40.52 | 0.298 | 14.1 | -- | 0.758 | -- | -- | -- | 0.246 | 0.318 | -- | -- | -- | -- |
| 65.35 | 0.378 | 14.1 | -- | -- | -0.74 | -- | -- | 0.258 | -- | 26.49 | 3280 | -- | -- |
| 76.69 | 0.409 | 14.1 | -- | -- | -- | -- | -- | 0.256 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 23.25 | wind | 1 | 14400 | > th | dose independent | rect. | 2 | 1 |
| 2 | 23.62 | wind | 1 | 14400 | < th | dose independent | rect. | 2 | 1 |
| 3 | 24.01 | temperature | 20 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 4 | 24.21 | temperature | 20 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 7 | 24.40 | temperature | 10 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 8 | 24.41 | temperature | 30 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 10 | 24.45 | wind | 1 | 43200 | < th | dose dependent | rect. | 2 | 7 |
| 13 | 24.48 | wind | 3 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 14 | 24.48 | wind | 1 | 43200 | < th | dose dependent | rect. | 2 | 5 |
| 23 | 24.53 | temperature | 20 | 14400 | > th | dose independent | rect. | 21 | 5 |
| 25 | 24.54 | temperature | 20 | 14400 | < th | dose independent | rect. | 20 | 7 |
| 31 | 24.56 | wind | 1 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 34 | 24.57 | temperature | 20 | 14400 | < th | dose independent | rect. | 21 | 5 |
| 41 | 24.59 | temperature | 20 | 14400 | < th | dose independent | rect. | 19 | 10 |
| 59 | 24.62 | wind | 3 | 43200 | > th | dose dependent | rect. | 6 | 3 |
| 62 | 24.63 | temperature | 20 | 14400 | > th | dose independent | rect. | 20 | 7 |
| 77 | 24.66 | temperature | 20 | 14400 | < th | dose independent | sin | 13 | NA |
| 80 | 24.66 | temperature | 20 | 14400 | > th | dose independent | rect. | 18 | 12 |
| 107 | 24.69 | temperature | 20 | 14400 | > th | dose independent | sin | 13 | NA |
| 156 | 24.73 | temperature | 10 | 14400 | > th | dose dependent | sin | 16 | NA |
| 166 | 24.73 | temperature | 10 | 14400 | > th | dose dependent | rect. | 13 | 12 |
| 177 | 24.74 | temperature | 10 | 14400 | > th | dose dependent | rect. | 13 | 10 |
| 182 | 24.74 | temperature | 10 | 14400 | > th | dose dependent | rect. | 17 | 21 |
| 212 | 24.75 | temperature | 10 | 14400 | > th | dose dependent | rect. | 7 | 19 |
| 226 | 24.76 | temperature | 30 | 14400 | < th | dose dependent | sin | 15 | NA |
| 237 | 24.76 | temperature | 30 | 14400 | < th | dose dependent | rect. | 13 | 12 |
| 239 | 24.76 | temperature | 10 | 14400 | > th | dose dependent | rect. | 9 | 17 |
| 244 | 24.76 | temperature | 10 | 14400 | > th | dose dependent | rect. | 17 | 18 |
| 247 | 24.76 | temperature | 10 | 14400 | > th | dose dependent | rect. | 3 | 20 |
| 253 | 24.76 | temperature | 10 | 14400 | > th | dose dependent | rect. | 12 | 22 |
| 268 | 24.77 | temperature | 10 | 14400 | > th | dose dependent | no | NA | NA |
| 361 | 24.78 | temperature | 30 | 14400 | < th | dose dependent | rect. | 17 | 18 |
| 370 | 24.78 | temperature | 30 | 14400 | < th | dose dependent | rect. | 13 | 21 |
| 371 | 24.78 | temperature | 30 | 14400 | < th | dose dependent | rect. | 17 | 21 |
| 470 | 24.80 | temperature | 30 | 14400 | < th | dose dependent | rect. | 7 | 22 |
| 507 | 24.81 | temperature | 30 | 14400 | < th | dose dependent | rect. | 3 | 20 |
| 508 | 24.81 | temperature | 30 | 14400 | < th | dose dependent | rect. | 6 | 20 |
| 539 | 24.82 | temperature | 30 | 14400 | < th | dose dependent | no | NA | NA |
| 571 | 24.82 | temperature | 30 | 14400 | < th | dose dependent | rect. | 8 | 18 |
| 784 | 24.86 | temperature | 10 | 14400 | > th | dose dependent | rect. | 3 | 11 |
| 798 | 24.86 | temperature | 10 | 14400 | > th | dose dependent | rect. | 24 | 15 |
| 847 | 24.87 | wind | 5 | 43200 | > th | dose independent | rect. | 5 | 5 |
| 848 | 24.87 | wind | 5 | 43200 | < th | dose independent | rect. | 5 | 5 |
| 858 | 24.87 | temperature | 10 | 14400 | > th | dose dependent | sin | 2 | NA |
| 930 | 24.88 | temperature | 10 | 14400 | > th | dose dependent | rect. | 5 | 6 |
| 985 | 24.89 | temperature | 10 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 986 | 24.89 | temperature | 30 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 987 | 24.89 | temperature | 10 | 14400 | > th | dose dependent | rect. | 6 | 4 |