Os05g0405900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : WD40-like domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os05g0405900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : WD40-like domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 21.41 | 0.217 | 12.3 | 0.208 | 0.368 | -0.438 | 0.454 | 1.01 | 0.341 | 1.65 | 19.53 | 18802 | -- | -- |
| 22.39 | 0.22 | 12.3 | 0.271 | 0.371 | -0.659 | 0.459 | -- | 0.311 | 1.65 | -1.238 | 47520 | -- | -- |
| 22.21 | 0.219 | 12.3 | 0.194 | 0.37 | -0.434 | -- | 1.02 | 0.338 | 1.51 | 19.51 | 18647 | -- | -- |
| 23.21 | 0.224 | 12.3 | 0.249 | 0.371 | -0.652 | -- | -- | 0.306 | 1.51 | -0.7531 | 47520 | -- | -- |
| 25.66 | 0.237 | 12.4 | -0.287 | -- | -0.65 | -- | 0.0103 | 0.148 | -- | 19.51 | 18647 | -- | -- |
| 26.71 | 0.242 | 12.4 | -0.416 | 0.356 | -- | 0.432 | -- | 0.038 | 1.67 | -- | -- | -- | -- |
| 27.45 | 0.245 | 12.4 | -0.43 | 0.356 | -- | -- | -- | 0.0358 | 1.52 | -- | -- | -- | -- |
| 25.66 | 0.237 | 12.4 | -0.289 | -- | -0.649 | -- | -- | 0.148 | -- | 19.51 | 18647 | -- | -- |
| 23.63 | 0.226 | 12.4 | -- | 0.368 | -0.475 | -- | -- | 0.225 | 1.51 | -5.116 | 47520 | -- | -- |
| 35.19 | 0.277 | 12.4 | -0.416 | -- | -- | -- | -- | 0.0435 | -- | -- | -- | -- | -- |
| 32.32 | 0.266 | 12.4 | -- | 0.348 | -- | -- | -- | 0.0837 | 1.48 | -- | -- | -- | -- |
| 27.76 | 0.246 | 12.4 | -- | -- | -0.713 | -- | -- | 0.189 | -- | 19.51 | 18647 | -- | -- |
| 39.76 | 0.294 | 12.4 | -- | -- | -- | -- | -- | 0.0897 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 20.64 | humidity | 70 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 3 | 20.69 | humidity | 80 | 43200 | < th | dose independent | rect. | 13 | 4 |
| 5 | 20.70 | humidity | 80 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 9 | 20.73 | humidity | 80 | 43200 | > th | dose independent | rect. | 13 | 4 |
| 17 | 20.75 | humidity | 80 | 43200 | > th | dose dependent | rect. | 10 | 14 |
| 21 | 20.76 | humidity | 80 | 43200 | < th | dose independent | rect. | 10 | 7 |
| 22 | 20.76 | humidity | 80 | 43200 | > th | dose dependent | sin | 19 | NA |
| 24 | 20.76 | humidity | 70 | 43200 | > th | dose dependent | rect. | 10 | 6 |
| 29 | 20.77 | humidity | 80 | 43200 | > th | dose dependent | rect. | 13 | 10 |
| 36 | 20.78 | humidity | 80 | 43200 | > th | dose independent | rect. | 10 | 7 |
| 102 | 20.86 | temperature | 15 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 107 | 20.86 | humidity | 90 | 43200 | > th | dose independent | rect. | 14 | 8 |
| 135 | 20.89 | humidity | 90 | 43200 | < th | dose independent | rect. | 14 | 8 |
| 145 | 20.90 | humidity | 80 | 43200 | > th | dose independent | rect. | 5 | 14 |
| 146 | 20.90 | humidity | 90 | 43200 | > th | dose independent | rect. | 11 | 14 |
| 159 | 20.91 | humidity | 90 | 43200 | < th | dose independent | rect. | 13 | 11 |
| 164 | 20.92 | humidity | 80 | 43200 | > th | dose independent | sin | 22 | NA |
| 176 | 20.92 | temperature | 15 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 181 | 20.93 | humidity | 90 | 43200 | > th | dose independent | sin | 18 | NA |
| 222 | 20.95 | humidity | 90 | 43200 | < th | dose independent | sin | 18 | NA |
| 257 | 20.97 | temperature | 15 | 43200 | < th | dose independent | rect. | 23 | 2 |
| 293 | 20.98 | humidity | 80 | 43200 | > th | dose dependent | rect. | 3 | 17 |
| 344 | 21.01 | humidity | 80 | 43200 | < th | dose independent | sin | 22 | NA |
| 457 | 21.06 | humidity | 90 | 43200 | < th | dose independent | rect. | 17 | 2 |
| 528 | 21.09 | radiation | 1 | 43200 | > th | dose independent | rect. | 10 | 2 |
| 544 | 21.09 | humidity | 80 | 43200 | > th | dose dependent | rect. | 17 | 2 |
| 613 | 21.12 | radiation | 1 | 43200 | < th | dose independent | rect. | 10 | 2 |
| 627 | 21.12 | radiation | 1 | 43200 | < th | dose dependent | rect. | 10 | 2 |
| 630 | 21.12 | temperature | 20 | 43200 | < th | dose dependent | rect. | 14 | 8 |
| 633 | 21.12 | radiation | 1 | 43200 | < th | dose dependent | rect. | 19 | 11 |
| 639 | 21.13 | humidity | 90 | 43200 | < th | dose independent | rect. | 20 | 2 |
| 659 | 21.13 | radiation | 1 | 43200 | < th | dose dependent | rect. | 4 | 2 |
| 705 | 21.14 | temperature | 15 | 43200 | < th | dose dependent | sin | 9 | NA |
| 767 | 21.16 | temperature | 15 | 43200 | > th | dose independent | sin | 11 | NA |
| 785 | 21.16 | temperature | 15 | 43200 | > th | dose independent | rect. | 21 | 15 |
| 792 | 21.16 | temperature | 20 | 43200 | < th | dose dependent | rect. | 16 | 3 |
| 834 | 21.17 | temperature | 15 | 43200 | > th | dose independent | rect. | 23 | 13 |
| 917 | 21.18 | radiation | 30 | 43200 | > th | dose dependent | rect. | 16 | 16 |
| 954 | 21.19 | temperature | 20 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 980 | 21.20 | radiation | 1 | 43200 | > th | dose independent | rect. | 7 | 6 |
| 981 | 21.20 | radiation | 1 | 43200 | < th | dose independent | rect. | 7 | 6 |