Os05g0404700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Zinc finger, CW-type domain containing protein.
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Os05g0404700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Zinc finger, CW-type domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 223.84 | 0.703 | 3.54 | -0.422 | 0.492 | -0.971 | -1.1 | 0.381 | 0.0148 | 21.7 | 90 | 1353 | -- | -- |
| 224.07 | 0.697 | 3.54 | -0.456 | 0.491 | -0.958 | -1.11 | -- | 0.00682 | 21.7 | 89.58 | 1353 | -- | -- |
| 228.38 | 0.704 | 3.54 | -0.393 | 0.499 | -0.989 | -- | 0.301 | 0.0189 | 21.6 | 89.85 | 1353 | -- | -- |
| 228.52 | 0.704 | 3.54 | -0.42 | 0.501 | -0.981 | -- | -- | 0.0149 | 21.6 | 89.58 | 1353 | -- | -- |
| 242.17 | 0.725 | 3.53 | -0.385 | -- | -1.01 | -- | 0.431 | 0.0206 | -- | 89.39 | 1430 | -- | -- |
| 238.86 | 0.725 | 3.56 | -0.327 | 0.49 | -- | -1.19 | -- | -0.103 | 21.2 | -- | -- | -- | -- |
| 243.86 | 0.731 | 3.56 | -0.283 | 0.498 | -- | -- | -- | -0.101 | 21 | -- | -- | -- | -- |
| 242.52 | 0.725 | 3.52 | -0.426 | -- | -0.994 | -- | -- | 0.0171 | -- | 89.36 | 1429 | -- | -- |
| 233.02 | 0.711 | 3.53 | -- | 0.5 | -0.887 | -- | -- | 0.0492 | 21.5 | 89.39 | 1353 | -- | -- |
| 258.1 | 0.751 | 3.55 | -0.283 | -- | -- | -- | -- | -0.105 | -- | -- | -- | -- | -- |
| 245.98 | 0.734 | 3.56 | -- | 0.499 | -- | -- | -- | -0.0698 | 21 | -- | -- | -- | -- |
| 247.12 | 0.732 | 3.51 | -- | -- | -0.897 | -- | -- | 0.0502 | -- | 89.32 | 1422 | -- | -- |
| 260.21 | 0.753 | 3.54 | -- | -- | -- | -- | -- | -0.0732 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 219.85 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 2 | 219.85 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 3 | 219.89 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 4 | 220.44 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 5 | 220.84 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 13 | 3 |
| 13 | 221.52 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 2 | 1 |
| 15 | 221.67 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 1 | 17 |
| 28 | 222.01 | humidity | 60.0 | 43200 | > th | dose dependent | rect. | 24 | 15 |
| 30 | 222.05 | wind | 7.0 | 43200 | < th | dose independent | rect. | 16 | 3 |
| 34 | 222.10 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 36 | 222.11 | wind | 7.0 | 43200 | > th | dose independent | rect. | 16 | 3 |
| 41 | 222.13 | humidity | 90.0 | 1440 | < th | dose independent | sin | 2 | NA |
| 54 | 222.24 | temperature | 15.0 | 90 | > th | dose independent | rect. | 9 | 20 |
| 60 | 222.25 | humidity | 60.0 | 43200 | > th | dose dependent | sin | 5 | NA |
| 62 | 222.25 | humidity | 50.0 | 43200 | > th | dose dependent | rect. | 3 | 4 |
| 100 | 222.36 | wind | 3.0 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 101 | 222.36 | wind | 3.0 | 43200 | < th | dose independent | rect. | 13 | 2 |
| 153 | 222.45 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 155 | 222.46 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 16 | 3 |
| 168 | 222.48 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 172 | 222.49 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 180 | 222.50 | wind | 5.0 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 205 | 222.54 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 2 | 1 |
| 219 | 222.56 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 24 | 11 |
| 221 | 222.56 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 22 | 13 |
| 229 | 222.58 | humidity | 90.0 | 43200 | < th | dose dependent | sin | 7 | NA |
| 270 | 222.63 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 290 | 222.64 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 22 | 17 |
| 335 | 222.69 | humidity | 50.0 | 43200 | > th | dose dependent | rect. | 24 | 1 |
| 342 | 222.70 | wind | 3.0 | 1440 | > th | dose dependent | rect. | 15 | 4 |
| 346 | 222.70 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 4 | 6 |
| 369 | 222.72 | radiation | 20.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 435 | 222.76 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 21 | 21 |
| 464 | 222.78 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 22 | 17 |
| 559 | 222.85 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 604 | 222.88 | temperature | 15.0 | 270 | > th | dose independent | rect. | 7 | 21 |
| 656 | 222.91 | humidity | 60.0 | 43200 | > th | dose dependent | rect. | 10 | 20 |
| 692 | 222.94 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 22 | 18 |
| 740 | 222.98 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 743 | 222.98 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 21 | 6 |
| 747 | 222.98 | humidity | 60.0 | 43200 | > th | dose dependent | rect. | 13 | 17 |
| 765 | 223.00 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 21 | 4 |
| 793 | 223.02 | humidity | 70.0 | 43200 | > th | dose independent | sin | 5 | NA |
| 811 | 223.03 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 19 | 21 |
| 813 | 223.03 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 24 | 1 |
| 845 | 223.04 | humidity | 60.0 | 43200 | > th | dose dependent | rect. | 13 | 23 |
| 848 | 223.05 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 13 | 17 |
| 866 | 223.06 | wind | 5.0 | 1440 | < th | dose independent | rect. | 7 | 11 |
| 869 | 223.06 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 12 | 19 |
| 874 | 223.06 | humidity | 60.0 | 43200 | > th | dose dependent | no | NA | NA |
| 932 | 223.09 | wind | 3.0 | 1440 | > th | dose dependent | rect. | 11 | 8 |
| 951 | 223.10 | wind | 5.0 | 1440 | < th | dose independent | rect. | 11 | 7 |
| 958 | 223.10 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 13 | 22 |
| 997 | 223.13 | temperature | 15.0 | 270 | > th | dose independent | rect. | 9 | 18 |