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Os05g0394900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.5 (0.014) R2 : 0.818
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.06 (0.0344) R2dC : 0.395 R2C : 0.54
β3 : 1.21 (0.05) R2dE : 0.258 R2E : 0.413
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.13 (0.0297) R2dN8 : 0.00991 R2N8 : 0.0164
σ : 0.263
deviance : 31.84
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_____
C
peak time of C : 12.6
E
wheather : temperature
threshold : 2.284
memory length : 186
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 20
open length of G : 19

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
25.87 0.239 10.6 -0.157 1.01 1.28 -0.969 -0.804 0.0878 12.5 6.665 166 20.2 19.2
26.42 0.239 10.5 -0.0895 1.02 1.28 -1.05 -- 0.117 12.5 4.454 167 20.1 19.2
29.47 0.253 10.6 -0.204 1.01 1.27 -- -1.34 0.0964 12.4 6.515 152 20.3 19.3
31.52 0.261 10.5 -0.121 1.04 1.27 -- -- 0.106 12.6 3.617 187 20 19.1
69.13 0.387 10.6 -0.348 -- 1.86 -- -2.38 0.049 -- 5.389 258 21.4 17.8
52.05 0.338 10.5 0.0207 1.36 -- -0.991 -- 0.213 11 -- -- -- --
56.19 0.351 10.5 -0.0202 1.36 -- -- -- 0.209 10.9 -- -- -- --
66.63 0.38 10.6 -0.245 -- 1.83 -- -- 0.00738 -- 12.51 191 23.3 15.9
31.84 0.263 10.5 -- 1.06 1.21 -- -- 0.13 12.6 2.284 186 20 19
171.5 0.612 10.5 -0.0497 -- -- -- -- 0.199 -- -- -- -- --
56.2 0.351 10.5 -- 1.36 -- -- -- 0.211 10.9 -- -- -- --
67 0.381 10.6 -- -- 1.65 -- -- 0.0585 -- 11.02 173 23.7 15.6
171.56 0.611 10.5 -- -- -- -- -- 0.205 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 28.08 temperature 10.0 90 > th dose dependent rect. 21 19
3 28.25 temperature 15.0 270 > th dose independent rect. 20 18
6 28.81 temperature 15.0 270 > th dose independent rect. 19 20
9 29.47 temperature 10.0 10 > th dose dependent rect. 21 19
13 29.76 wind 7.0 270 < th dose independent rect. 20 18
15 30.02 radiation 30.0 270 < th dose independent rect. 15 3
22 30.22 wind 7.0 270 < th dose independent rect. 19 20
23 30.23 humidity 50.0 270 > th dose independent rect. 19 20
25 30.49 radiation 40.0 270 < th dose independent rect. 14 6
27 30.51 temperature 15.0 270 > th dose independent rect. 7 8
29 30.53 humidity 50.0 270 > th dose independent rect. 20 18
38 30.71 precipitation 0.1 270 < th dose independent rect. 20 18
39 30.71 precipitation 0.1 270 < th dose dependent rect. 20 18
43 30.80 wind 1.0 270 > th dose independent rect. 15 4
45 30.81 temperature 10.0 270 > th dose independent rect. 15 4
47 30.81 atmosphere 1010.0 270 < th dose independent rect. 15 4
49 30.81 wind 1.0 270 > th dose independent rect. 14 6
51 30.81 wind 9.0 270 < th dose independent rect. 18 22
52 30.87 precipitation 0.1 270 < th dose independent rect. 19 20
54 30.87 precipitation 0.1 270 < th dose dependent rect. 19 20
55 30.88 temperature 10.0 270 > th dose independent rect. 14 6
56 30.88 atmosphere 1015.0 270 < th dose independent rect. 14 6
58 30.88 atmosphere 995.0 270 > th dose independent rect. 20 18
60 31.00 radiation 40.0 270 < th dose dependent rect. 15 3
62 31.06 temperature 10.0 270 > th dose independent rect. 16 2
64 31.06 atmosphere 1010.0 270 < th dose independent rect. 16 2
68 31.08 atmosphere 995.0 270 > th dose independent rect. 14 6
70 31.11 atmosphere 995.0 270 > th dose independent rect. 15 4
74 31.13 radiation 40.0 90 < th dose dependent rect. 15 6
75 31.14 precipitation 0.1 270 < th dose independent rect. 14 6
77 31.14 precipitation 0.1 270 < th dose dependent rect. 14 6
80 31.17 precipitation 0.1 270 < th dose independent rect. 15 4
82 31.17 precipitation 0.1 270 < th dose dependent rect. 15 4
83 31.19 atmosphere 995.0 270 > th dose independent rect. 19 20
84 31.19 radiation 40.0 90 < th dose dependent rect. 16 17
85 31.20 wind 1.0 270 > th dose independent rect. 16 2
91 31.24 wind 9.0 270 < th dose independent rect. 15 4
92 31.25 radiation 1.0 270 > th dose independent rect. 6 9
93 31.26 wind 9.0 270 < th dose independent rect. 14 6
94 31.29 atmosphere 995.0 270 > th dose independent rect. 16 2
100 31.42 precipitation 0.1 270 < th dose independent rect. 18 22
101 31.42 precipitation 0.1 270 < th dose dependent rect. 18 22
115 31.52 wind 9.0 270 < th dose independent rect. 16 2
116 31.53 humidity 90.0 90 < th dose independent rect. 9 7
136 31.69 precipitation 0.1 270 < th dose independent rect. 16 2
137 31.69 precipitation 0.1 270 < th dose dependent rect. 16 2
144 31.78 atmosphere 1015.0 270 < th dose independent rect. 20 18
157 31.85 temperature 15.0 90 > th dose independent rect. 9 7
159 31.86 temperature 10.0 270 > th dose dependent rect. 19 7
172 31.99 temperature 10.0 90 > th dose dependent rect. 9 7
173 32.02 wind 7.0 10 < th dose independent rect. 21 19
175 32.02 atmosphere 1015.0 270 < th dose independent rect. 19 20
179 32.06 radiation 30.0 10 < th dose dependent rect. 16 5
181 32.10 humidity 90.0 270 < th dose independent rect. 9 5
208 32.25 temperature 10.0 270 > th dose dependent rect. 7 8
224 32.38 atmosphere 995.0 10 > th dose independent rect. 16 5
254 32.63 radiation 20.0 90 < th dose independent rect. 16 17
259 32.66 radiation 30.0 10 < th dose independent rect. 16 5
261 32.67 atmosphere 995.0 90 > th dose dependent rect. 16 4
274 32.73 radiation 1.0 270 > th dose independent rect. 4 11
285 32.74 atmosphere 995.0 270 > th dose dependent rect. 16 2
290 32.77 temperature 10.0 10 > th dose independent rect. 16 5
292 32.77 atmosphere 1010.0 10 < th dose independent rect. 16 5
295 32.77 temperature 10.0 10 > th dose independent rect. 21 19
310 32.90 precipitation 0.1 10 < th dose independent rect. 16 5
311 32.90 precipitation 0.1 10 < th dose dependent rect. 16 5
313 32.93 temperature 15.0 270 > th dose independent rect. 9 5
315 32.94 wind 1.0 10 > th dose independent rect. 16 5
319 32.95 humidity 50.0 90 > th dose independent rect. 16 5
340 33.03 humidity 60.0 270 > th dose independent rect. 19 8
349 33.05 temperature 10.0 270 > th dose independent rect. 19 8
350 33.05 temperature 30.0 270 < th dose independent rect. 19 8
352 33.05 atmosphere 995.0 270 > th dose independent rect. 19 8
353 33.05 radiation 1.0 270 < th dose independent rect. 19 8
358 33.05 temperature 10.0 270 > th dose independent rect. 3 16
359 33.05 atmosphere 1015.0 270 < th dose independent rect. 3 16
361 33.05 radiation 1.0 270 < th dose dependent rect. 19 8
366 33.07 wind 9.0 270 < th dose independent rect. 19 8
384 33.18 atmosphere 995.0 10 > th dose independent rect. 21 19
399 33.26 humidity 50.0 10 > th dose independent rect. 16 5
426 33.40 atmosphere 1015.0 10 < th dose independent rect. 21 19
430 33.41 wind 7.0 270 < th dose independent rect. 7 8
451 33.49 precipitation 0.1 270 < th dose independent rect. 19 8
454 33.49 precipitation 0.1 270 < th dose dependent rect. 19 8
455 33.50 atmosphere 1010.0 90 < th dose independent rect. 9 7
477 33.61 precipitation 0.1 270 < th dose independent rect. 6 9
478 33.61 precipitation 0.1 270 < th dose dependent rect. 6 9
488 33.63 humidity 50.0 270 > th dose independent rect. 7 8
491 33.64 wind 1.0 270 > th dose dependent rect. 16 2
493 33.65 atmosphere 995.0 270 > th dose dependent rect. 14 6
497 33.67 radiation 30.0 270 < th dose independent rect. 15 15
536 33.76 temperature 10.0 1440 > th dose independent rect. 17 5
540 33.76 radiation 30.0 1440 < th dose independent rect. 17 5
547 33.76 temperature 10.0 1440 > th dose independent rect. 22 19
550 33.79 humidity 50.0 10 > th dose independent rect. 21 19
551 33.80 atmosphere 1010.0 270 < th dose independent rect. 9 5
558 33.85 precipitation 0.1 270 < th dose independent rect. 3 16
560 33.85 precipitation 0.1 270 < th dose dependent rect. 3 16
561 33.88 atmosphere 995.0 270 > th dose independent rect. 3 16
568 33.90 wind 9.0 270 < th dose independent rect. 3 16
577 33.93 wind 1.0 270 > th dose dependent rect. 15 4
582 33.94 atmosphere 1015.0 270 < th dose independent rect. 6 9
583 33.94 temperature 10.0 270 > th dose independent rect. 15 15
607 34.00 temperature 15.0 270 > th dose independent rect. 9 16
621 34.04 wind 7.0 90 < th dose independent rect. 9 7
633 34.08 wind 1.0 270 > th dose independent rect. 19 8
657 34.16 atmosphere 995.0 10 > th dose dependent rect. 16 5
724 34.37 radiation 10.0 90 < th dose dependent rect. 5 15
733 34.41 wind 7.0 270 < th dose independent rect. 9 5
744 34.44 atmosphere 995.0 270 > th dose independent rect. 6 9
785 34.58 atmosphere 995.0 270 > th dose independent rect. 15 15
786 34.58 precipitation 0.1 270 < th dose independent rect. 15 15
789 34.58 precipitation 0.1 270 < th dose dependent rect. 15 15
797 34.61 wind 9.0 270 < th dose independent rect. 15 15
798 34.62 humidity 90.0 270 < th dose independent rect. 15 4
848 34.70 wind 9.0 90 < th dose dependent rect. 16 4
856 34.72 radiation 20.0 10 < th dose independent rect. 16 17
883 34.78 atmosphere 1015.0 270 < th dose independent rect. 19 7
902 34.85 wind 9.0 270 < th dose dependent rect. 16 2
931 34.91 humidity 90.0 270 < th dose independent rect. 16 1
947 34.93 radiation 10.0 10 < th dose dependent rect. 10 11
979 35.00 wind 1.0 270 > th dose independent rect. 3 16