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Os05g0391500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Endo-beta-mannosidase.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.89 (0.0184) R2 : 0.0426
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.175 (0.0388) R2dN8 : 0.0551 R2N8 : 0.0426
σ : 0.347
deviance : 55.29
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
30.25 0.258 9.86 -0.179 0.475 0.334 -0.101 1.63 0.165 12.3 19.5 2441 -- --
31.73 0.262 9.9 -0.675 0.441 0.385 -0.255 -- 0.0919 12.2 24.42 3152 -- --
30.29 0.256 9.86 -0.182 0.476 0.333 -- 1.63 0.163 12.3 19.56 2432 -- --
31.7 0.262 9.9 -0.624 0.481 0.404 -- -- 0.102 12.3 25.84 2424 -- --
37.63 0.287 9.92 -0.579 -- 0.66 -- 0.398 0.0278 -- 19.56 2432 -- --
36.95 0.285 9.9 -0.489 0.419 -- -0.268 -- 0.126 12.3 -- -- -- --
37.26 0.286 9.9 -0.499 0.42 -- -- -- 0.125 12.3 -- -- -- --
37.8 0.288 9.93 -0.647 -- 0.68 -- -- 0.00825 -- 19.56 2432 -- --
40.92 0.298 9.87 -- 0.456 0.3 -- -- 0.222 12.4 28.71 3641 -- --
48.33 0.325 9.91 -0.513 -- -- -- -- 0.118 -- -- -- -- --
43.83 0.31 9.89 -- 0.427 -- -- -- 0.18 12.4 -- -- -- --
48.37 0.325 9.91 -- -- 0.54 -- -- 0.0996 -- 19.56 2432 -- --
55.29 0.347 9.89 -- -- -- -- -- 0.175 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 29.69 temperature 30 14400 < th dose independent rect. 18 15
2 29.95 temperature 30 14400 > th dose independent rect. 18 15
3 30.04 temperature 30 14400 > th dose dependent rect. 18 15
4 30.19 temperature 30 14400 < th dose independent rect. 18 4
6 30.20 temperature 30 14400 < th dose independent rect. 18 2
18 30.29 temperature 30 14400 > th dose independent rect. 18 1
34 30.41 temperature 30 14400 > th dose dependent rect. 18 1
49 30.43 temperature 20 1440 > th dose dependent rect. 20 19
50 30.44 temperature 30 4320 < th dose dependent rect. 6 2
51 30.44 temperature 20 1440 > th dose dependent rect. 22 17
61 30.47 temperature 25 14400 > th dose dependent rect. 21 1
62 30.47 temperature 10 4320 > th dose dependent rect. 6 2
72 30.50 temperature 25 4320 > th dose independent rect. 7 2
77 30.52 temperature 30 4320 < th dose dependent rect. 5 4
79 30.53 temperature 25 14400 > th dose independent rect. 22 1
80 30.53 temperature 15 4320 > th dose dependent rect. 5 4
83 30.53 temperature 20 270 > th dose dependent rect. 18 21
88 30.54 temperature 25 14400 < th dose independent rect. 22 1
96 30.54 temperature 20 1440 > th dose dependent rect. 10 22
98 30.55 temperature 25 4320 < th dose independent rect. 7 2
108 30.56 wind 1 1440 > th dose independent rect. 4 1
109 30.56 temperature 20 1440 > th dose dependent sin 5 NA
111 30.56 temperature 20 1440 > th dose dependent no NA NA
117 30.56 temperature 10 1440 > th dose dependent rect. 9 18
118 30.56 temperature 20 1440 > th dose dependent rect. 10 18
126 30.56 temperature 20 1440 > th dose dependent rect. 6 22
134 30.57 temperature 10 4320 > th dose dependent rect. 3 7
152 30.57 temperature 20 1440 > th dose dependent rect. 13 23
182 30.58 temperature 10 1440 > th dose dependent rect. 6 21
188 30.58 temperature 20 1440 > th dose dependent rect. 1 23
203 30.59 temperature 10 4320 > th dose dependent rect. 21 14
228 30.60 temperature 30 1440 < th dose independent rect. 11 1
229 30.60 temperature 25 4320 > th dose dependent rect. 8 2
238 30.60 temperature 10 1440 > th dose dependent rect. 24 15
255 30.60 temperature 10 1440 > th dose dependent rect. 18 21
256 30.60 temperature 10 1440 > th dose dependent rect. 24 21
290 30.61 temperature 30 4320 < th dose dependent rect. 21 13
302 30.61 temperature 10 1440 > th dose dependent rect. 20 19
332 30.61 temperature 10 1440 > th dose dependent rect. 20 23
333 30.61 temperature 10 1440 > th dose dependent rect. 22 23
334 30.62 humidity 90 43200 > th dose independent rect. 10 1
338 30.62 temperature 10 4320 > th dose dependent sin 7 NA
340 30.62 temperature 10 1440 > th dose dependent no NA NA
342 30.62 humidity 90 43200 > th dose dependent rect. 10 1
364 30.62 temperature 10 1440 > th dose dependent rect. 24 19
380 30.62 temperature 10 1440 > th dose dependent rect. 22 21
544 30.64 temperature 10 1440 > th dose dependent rect. 13 23
596 30.66 temperature 10 1440 > th dose dependent sin 18 NA
602 30.66 temperature 25 1440 > th dose dependent rect. 8 5
652 30.67 temperature 10 1440 > th dose dependent sin 3 NA
705 30.68 temperature 30 14400 < th dose independent rect. 6 4
706 30.68 temperature 20 1440 > th dose dependent sin 16 NA
712 30.68 temperature 30 4320 < th dose dependent sin 8 NA
722 30.68 temperature 10 1440 > th dose dependent rect. 11 12
754 30.69 wind 5 43200 > th dose independent rect. 20 2
767 30.69 temperature 30 14400 < th dose independent rect. 1 9
957 30.73 temperature 10 1440 > th dose dependent rect. 11 2
990 30.73 temperature 30 1440 < th dose dependent rect. 6 20
995 30.74 wind 1 1440 < th dose independent rect. 4 1
996 30.74 wind 5 43200 < th dose independent rect. 20 2