BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os05g0391500 Os05g0391500|AK119412
         (984 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G09010.1  | chr1:2895259-2899287 REVERSE LENGTH=945           1348   0.0  

>AT1G09010.1 | chr1:2895259-2899287 REVERSE LENGTH=945
          Length = 944

 Score = 1348 bits (3489), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 644/966 (66%), Positives = 761/966 (78%), Gaps = 35/966 (3%)

Query: 14  EVGKRVLDTGWLAARSTEVALTGEQLXXXXXXXXXXXXXXXWMHAAVPGTVLGTLLKNKL 73
           E+GK VLD GW+AARSTEV + G QL               WM AAVPGTVLGTL+KNK 
Sbjct: 3   EIGKTVLDFGWIAARSTEVDVNGVQLTTTNPPAISSESR--WMEAAVPGTVLGTLVKNKA 60

Query: 74  IPDPFYGLNNESIIDIAKSGRGHYTFWFFTTFQCAPAGHQHVSLNFRGINYSAEVYLNGH 133
           IPDPFYGL NE+I DIA SGR +YTFWFFT FQC    +Q+V LNFR INYSA+V++NGH
Sbjct: 61  IPDPFYGLENEAITDIADSGRDYYTFWFFTKFQCQRLLNQYVHLNFRAINYSAQVFVNGH 120

Query: 134 KEVLPKGMFRRHTLDITDVLRPDGKNLLAVLVHPPVHPGAIXXXXXXXXDHEIGKDVATQ 193
           K  LPKGMFRRHTLD+TD+L P+  NLLA++VHPP HPG I        DHEIGKDVA Q
Sbjct: 121 KTELPKGMFRRHTLDVTDILHPES-NLLALIVHPPDHPGTIPPEGGQGGDHEIGKDVAAQ 179

Query: 194 YVEGWDWMCPIRDRNTGIWDEVSISVTGPVRIMDPHLVSTFYDDFKRSYLHCTLQLENRS 253
           YV+GWDW+CPIRDRNTGIWDEVSISVTGPVRI+DPHLVSTF+DD+KR+YLH T +LEN+S
Sbjct: 180 YVQGWDWICPIRDRNTGIWDEVSISVTGPVRIIDPHLVSTFFDDYKRAYLHVTAELENKS 239

Query: 254 SWLSDCKLKIQVSTELEGNICLVEHLQSYEISVPPNSVLEYTIPPLFFYKPNLWWPNGMG 313
           +W ++C + IQ++ ELE  +CLVEHLQ+  + +P    +++T  PL+FYKP LWWPNGMG
Sbjct: 240 TWNTECSVNIQITAELENGVCLVEHLQTENVLIPAQGRIQHTFKPLYFYKPELWWPNGMG 299

Query: 314 KQSLYNVEIGVDANGFGESDSSNHHFGFRKIESTIDGSTGGRIFKVNGEPVFIRGGNWIL 373
           KQ+LY++ I V  N FGESDS    FGFRKIES ID  TGGR+FK+NGEP+FIRGGNWIL
Sbjct: 300 KQNLYDILITVVVNEFGESDSWMQPFGFRKIESVIDSVTGGRLFKINGEPIFIRGGNWIL 359

Query: 374 SDGLLRLTRKRYMTDIKFHADMNFNMLRCWGGGLAERPDFYHFCDIYGLMVWQEFWITGD 433
           SDGLLRL+++RY TDIKFHADMN NM+RCWGGGLAERP+FYHFCDIYGL+VWQEFWITGD
Sbjct: 360 SDGLLRLSKERYRTDIKFHADMNMNMIRCWGGGLAERPEFYHFCDIYGLLVWQEFWITGD 419

Query: 434 VDGRGIPISNPNGPLDHDLFLLCARDTVKLLRNHASLALWVGGNEQVPPVDINKALKNDL 493
           VDGRG+P+SNPNGPLDH+LFLLCARDTVKLLRNH SLALWVGGNEQVPP DIN+ALK DL
Sbjct: 420 VDGRGVPVSNPNGPLDHELFLLCARDTVKLLRNHPSLALWVGGNEQVPPKDINEALKQDL 479

Query: 494 KLHPMFVSNHTTKSPGKDISEDPTDPSKYLDGTRVYVQGSMWDGFANGKGDFTDGPYEIQ 553
           +LH  F +        + +S+  +DPS YLDGTRVY+QGSMWDGFA+GKG+FTDGPYEIQ
Sbjct: 480 RLHSYFET--------QLLSDKDSDPSVYLDGTRVYIQGSMWDGFADGKGNFTDGPYEIQ 531

Query: 554 YPESFFKDSFYKYGFNPEVGSVGVPVAATIRATMPSEGWSIPIFKKRIDGYINEVPNPIW 613
           YPE FFKD++YKYGFNPEVGSVG+PVA TIRATMP EGW+IP+FKK +DG+I EVPN +W
Sbjct: 532 YPEDFFKDTYYKYGFNPEVGSVGMPVAETIRATMPPEGWTIPLFKKGLDGFIKEVPNRMW 591

Query: 614 DYHKYIPYSKPGKVHDQIELYGHPSDLDDFCEKAQLVNYVQYRALLEGWTSFMWTKFTGV 673
           DYHKYIPYS PGKVHDQI +YG P +LDDFC KAQLVNY+QYRAL EGW+S MWTK+TGV
Sbjct: 592 DYHKYIPYSNPGKVHDQILMYGTPENLDDFCLKAQLVNYIQYRALFEGWSSQMWTKYTGV 651

Query: 674 LIWKTQNPWTGLRGQFYDHLLDQTAGFYGCRCAAEPIHVQLNLDSYFIEVVNTTADELRD 733
           LIWK QNPWTGLRGQFYDHLLDQTA FYGCR AAEP+HVQLNL SYF+EVVNTT+ EL D
Sbjct: 652 LIWKNQNPWTGLRGQFYDHLLDQTASFYGCRSAAEPVHVQLNLASYFVEVVNTTSKELSD 711

Query: 734 VAVEISAWDLDGASPYYRVTEKIAVPPKKVQQVTEMSYPKTKNPKPVYFLLLKLFKLSDN 793
           VA+E S WDLDG  PYY+V + ++ PPKKV +++E  YPK  NPK VYFLLLKL+ +SD 
Sbjct: 712 VAIEASVWDLDGNCPYYKVFKIVSAPPKKVVKISEFKYPKAANPKHVYFLLLKLYTVSDK 771

Query: 794 QVLSRNFYWLHLPGKDYKLLEQYRQKQIPLXXXXXXXXXXXXYKVRMSIENRSKKPENAN 853
            V+SRNFYWLHLPGK+Y LLE YR+KQIPL            Y++ +++ N S+    AN
Sbjct: 772 AVISRNFYWLHLPGKNYTLLEPYRKKQIPLKITCNAVMVGSRYELEVNVHNTSR----AN 827

Query: 854 VSTMNLADANGSDRTGEEAIQDGHSSGLWGKI-RRGLIITRSDDNVRTVEVKGADSGVSF 912
           ++   + +    D             GL  K+  R ++   S+  ++ VE+KG+DSGV+F
Sbjct: 828 LAKNVVQEDEKRDL------------GLLQKLFSRCVVSADSNRGLKVVEMKGSDSGVAF 875

Query: 913 FLHFSVHTSEPSSSQDVYKDTRILPVHYSDNYFSLVPGEKMAIDISFEAPQG--STPRVI 970
           FL FSVH +E        +DTRILPVHYSDNYFSLVPGE M+  ISF AP G   +PRV+
Sbjct: 876 FLRFSVHNAETEK-----QDTRILPVHYSDNYFSLVPGESMSFKISFAAPTGMKKSPRVM 930

Query: 971 LKGWNY 976
           L+GWNY
Sbjct: 931 LQGWNY 936



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.320    0.139    0.441 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 23,016,175
Number of extensions: 1064106
Number of successful extensions: 2070
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 2064
Number of HSP's successfully gapped: 1
Length of query: 984
Length of database: 11,106,569
Length adjustment: 108
Effective length of query: 876
Effective length of database: 8,145,641
Effective search space: 7135581516
Effective search space used: 7135581516
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 117 (49.7 bits)