BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os05g0391500 Os05g0391500|AK119412
         (984 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os05g0391500  Similar to Endo-beta-mannosidase                   1910   0.0  

>Os05g0391500 Similar to Endo-beta-mannosidase
          Length = 984

 Score = 1910 bits (4948), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 936/971 (96%), Positives = 936/971 (96%)

Query: 14  EVGKRVLDTGWLAARSTEVALTGEQLXXXXXXXXXXXXXXXWMHAAVPGTVLGTLLKNKL 73
           EVGKRVLDTGWLAARSTEVALTGEQL               WMHAAVPGTVLGTLLKNKL
Sbjct: 14  EVGKRVLDTGWLAARSTEVALTGEQLTTTDPPPADPEPTAPWMHAAVPGTVLGTLLKNKL 73

Query: 74  IPDPFYGLNNESIIDIAKSGRGHYTFWFFTTFQCAPAGHQHVSLNFRGINYSAEVYLNGH 133
           IPDPFYGLNNESIIDIAKSGRGHYTFWFFTTFQCAPAGHQHVSLNFRGINYSAEVYLNGH
Sbjct: 74  IPDPFYGLNNESIIDIAKSGRGHYTFWFFTTFQCAPAGHQHVSLNFRGINYSAEVYLNGH 133

Query: 134 KEVLPKGMFRRHTLDITDVLRPDGKNLLAVLVHPPVHPGAIXXXXXXXXDHEIGKDVATQ 193
           KEVLPKGMFRRHTLDITDVLRPDGKNLLAVLVHPPVHPGAI        DHEIGKDVATQ
Sbjct: 134 KEVLPKGMFRRHTLDITDVLRPDGKNLLAVLVHPPVHPGAIPPQGGQGGDHEIGKDVATQ 193

Query: 194 YVEGWDWMCPIRDRNTGIWDEVSISVTGPVRIMDPHLVSTFYDDFKRSYLHCTLQLENRS 253
           YVEGWDWMCPIRDRNTGIWDEVSISVTGPVRIMDPHLVSTFYDDFKRSYLHCTLQLENRS
Sbjct: 194 YVEGWDWMCPIRDRNTGIWDEVSISVTGPVRIMDPHLVSTFYDDFKRSYLHCTLQLENRS 253

Query: 254 SWLSDCKLKIQVSTELEGNICLVEHLQSYEISVPPNSVLEYTIPPLFFYKPNLWWPNGMG 313
           SWLSDCKLKIQVSTELEGNICLVEHLQSYEISVPPNSVLEYTIPPLFFYKPNLWWPNGMG
Sbjct: 254 SWLSDCKLKIQVSTELEGNICLVEHLQSYEISVPPNSVLEYTIPPLFFYKPNLWWPNGMG 313

Query: 314 KQSLYNVEIGVDANGFGESDSSNHHFGFRKIESTIDGSTGGRIFKVNGEPVFIRGGNWIL 373
           KQSLYNVEIGVDANGFGESDSSNHHFGFRKIESTIDGSTGGRIFKVNGEPVFIRGGNWIL
Sbjct: 314 KQSLYNVEIGVDANGFGESDSSNHHFGFRKIESTIDGSTGGRIFKVNGEPVFIRGGNWIL 373

Query: 374 SDGLLRLTRKRYMTDIKFHADMNFNMLRCWGGGLAERPDFYHFCDIYGLMVWQEFWITGD 433
           SDGLLRLTRKRYMTDIKFHADMNFNMLRCWGGGLAERPDFYHFCDIYGLMVWQEFWITGD
Sbjct: 374 SDGLLRLTRKRYMTDIKFHADMNFNMLRCWGGGLAERPDFYHFCDIYGLMVWQEFWITGD 433

Query: 434 VDGRGIPISNPNGPLDHDLFLLCARDTVKLLRNHASLALWVGGNEQVPPVDINKALKNDL 493
           VDGRGIPISNPNGPLDHDLFLLCARDTVKLLRNHASLALWVGGNEQVPPVDINKALKNDL
Sbjct: 434 VDGRGIPISNPNGPLDHDLFLLCARDTVKLLRNHASLALWVGGNEQVPPVDINKALKNDL 493

Query: 494 KLHPMFVSNHTTKSPGKDISEDPTDPSKYLDGTRVYVQGSMWDGFANGKGDFTDGPYEIQ 553
           KLHPMFVSNHTTKSPGKDISEDPTDPSKYLDGTRVYVQGSMWDGFANGKGDFTDGPYEIQ
Sbjct: 494 KLHPMFVSNHTTKSPGKDISEDPTDPSKYLDGTRVYVQGSMWDGFANGKGDFTDGPYEIQ 553

Query: 554 YPESFFKDSFYKYGFNPEVGSVGVPVAATIRATMPSEGWSIPIFKKRIDGYINEVPNPIW 613
           YPESFFKDSFYKYGFNPEVGSVGVPVAATIRATMPSEGWSIPIFKKRIDGYINEVPNPIW
Sbjct: 554 YPESFFKDSFYKYGFNPEVGSVGVPVAATIRATMPSEGWSIPIFKKRIDGYINEVPNPIW 613

Query: 614 DYHKYIPYSKPGKVHDQIELYGHPSDLDDFCEKAQLVNYVQYRALLEGWTSFMWTKFTGV 673
           DYHKYIPYSKPGKVHDQIELYGHPSDLDDFCEKAQLVNYVQYRALLEGWTSFMWTKFTGV
Sbjct: 614 DYHKYIPYSKPGKVHDQIELYGHPSDLDDFCEKAQLVNYVQYRALLEGWTSFMWTKFTGV 673

Query: 674 LIWKTQNPWTGLRGQFYDHLLDQTAGFYGCRCAAEPIHVQLNLDSYFIEVVNTTADELRD 733
           LIWKTQNPWTGLRGQFYDHLLDQTAGFYGCRCAAEPIHVQLNLDSYFIEVVNTTADELRD
Sbjct: 674 LIWKTQNPWTGLRGQFYDHLLDQTAGFYGCRCAAEPIHVQLNLDSYFIEVVNTTADELRD 733

Query: 734 VAVEISAWDLDGASPYYRVTEKIAVPPKKVQQVTEMSYPKTKNPKPVYFLLLKLFKLSDN 793
           VAVEISAWDLDGASPYYRVTEKIAVPPKKVQQVTEMSYPKTKNPKPVYFLLLKLFKLSDN
Sbjct: 734 VAVEISAWDLDGASPYYRVTEKIAVPPKKVQQVTEMSYPKTKNPKPVYFLLLKLFKLSDN 793

Query: 794 QVLSRNFYWLHLPGKDYKLLEQYRQKQIPLXXXXXXXXXXXXYKVRMSIENRSKKPENAN 853
           QVLSRNFYWLHLPGKDYKLLEQYRQKQIPL            YKVRMSIENRSKKPENAN
Sbjct: 794 QVLSRNFYWLHLPGKDYKLLEQYRQKQIPLKINSKISISGSGYKVRMSIENRSKKPENAN 853

Query: 854 VSTMNLADANGSDRTGEEAIQDGHSSGLWGKIRRGLIITRSDDNVRTVEVKGADSGVSFF 913
           VSTMNLADANGSDRTGEEAIQDGHSSGLWGKIRRGLIITRSDDNVRTVEVKGADSGVSFF
Sbjct: 854 VSTMNLADANGSDRTGEEAIQDGHSSGLWGKIRRGLIITRSDDNVRTVEVKGADSGVSFF 913

Query: 914 LHFSVHTSEPSSSQDVYKDTRILPVHYSDNYFSLVPGEKMAIDISFEAPQGSTPRVILKG 973
           LHFSVHTSEPSSSQDVYKDTRILPVHYSDNYFSLVPGEKMAIDISFEAPQGSTPRVILKG
Sbjct: 914 LHFSVHTSEPSSSQDVYKDTRILPVHYSDNYFSLVPGEKMAIDISFEAPQGSTPRVILKG 973

Query: 974 WNYHLDHAVTL 984
           WNYHLDHAVTL
Sbjct: 974 WNYHLDHAVTL 984



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.320    0.139    0.441 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 35,841,387
Number of extensions: 1617563
Number of successful extensions: 2657
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 2657
Number of HSP's successfully gapped: 1
Length of query: 984
Length of database: 17,035,801
Length adjustment: 110
Effective length of query: 874
Effective length of database: 11,292,261
Effective search space: 9869436114
Effective search space used: 9869436114
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 161 (66.6 bits)