Os05g0390100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Dynamin family protein.
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Os05g0390100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Dynamin family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 93.24 | 0.454 | 10.3 | -1.65 | 0.735 | 0.0704 | -0.0298 | -5.84 | -0.767 | 4.41 | 29.9 | 4412 | -- | -- |
| 108.52 | 0.485 | 10.4 | -2.58 | 0.817 | -0.2 | 0.474 | -- | -0.968 | 3.97 | 31.79 | 41378 | -- | -- |
| 93.24 | 0.45 | 10.3 | -1.65 | 0.735 | 0.0704 | -- | -5.84 | -0.767 | 4.41 | 29.9 | 4413 | -- | -- |
| 101.27 | 0.469 | 10.5 | -2.73 | 0.828 | -0.312 | -- | -- | -1.07 | 3.59 | 29.9 | 17282 | -- | -- |
| 121.55 | 0.513 | 10.2 | -1.55 | -- | 0.0697 | -- | -6.53 | -0.733 | -- | 29.9 | 4272 | -- | -- |
| 110.43 | 0.493 | 10.4 | -2.55 | 0.78 | -- | 0.0783 | -- | -0.916 | 4.28 | -- | -- | -- | -- |
| 110.44 | 0.492 | 10.4 | -2.55 | 0.781 | -- | -- | -- | -0.916 | 4.28 | -- | -- | -- | -- |
| 126.91 | 0.525 | 10.5 | -2.75 | -- | -0.572 | -- | -- | -1.2 | -- | 29.9 | 12847 | -- | -- |
| 162.43 | 0.594 | 10.3 | -- | 0.777 | 1.73 | -- | -- | -0.265 | 4.46 | 18.2 | 47520 | -- | -- |
| 143.31 | 0.559 | 10.4 | -2.52 | -- | -- | -- | -- | -0.895 | -- | -- | -- | -- | -- |
| 282.41 | 0.786 | 10.3 | -- | 0.732 | -- | -- | -- | -0.632 | 4.35 | -- | -- | -- | -- |
| 195.7 | 0.652 | 10.2 | -- | -- | 1.72 | -- | -- | -0.213 | -- | 18.27 | 47520 | -- | -- |
| 311.25 | 0.823 | 10.3 | -- | -- | -- | -- | -- | -0.615 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 90.49 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 4 |
| 5 | 91.15 | wind | 1.0 | 14400 | > th | dose independent | rect. | 2 | 1 |
| 8 | 91.42 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 10 | 91.56 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 12 | 91.67 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 16 | 2 |
| 14 | 91.74 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 16 | 2 |
| 15 | 91.74 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 16 | 2 |
| 22 | 91.91 | wind | 1.0 | 14400 | < th | dose independent | rect. | 2 | 1 |
| 28 | 91.97 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 4 | 9 |
| 39 | 92.01 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 20 | 17 |
| 42 | 92.02 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 22 | 15 |
| 102 | 92.13 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 17 | 21 |
| 104 | 92.13 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 24 | 8 |
| 111 | 92.18 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 17 | 21 |
| 112 | 92.19 | temperature | 30.0 | 4320 | < th | dose independent | sin | 8 | NA |
| 117 | 92.23 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 122 | 92.29 | temperature | 30.0 | 4320 | > th | dose independent | sin | 8 | NA |
| 144 | 92.35 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 1 | 6 |
| 150 | 92.38 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 23 | 10 |
| 155 | 92.41 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 2 | 7 |
| 158 | 92.43 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 21 | 12 |
| 159 | 92.44 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 4 | 5 |
| 162 | 92.44 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 3 | 4 |
| 164 | 92.46 | temperature | 30.0 | 4320 | > th | dose dependent | rect. | 11 | 1 |
| 172 | 92.50 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 6 | 3 |
| 176 | 92.53 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 188 | 92.65 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 197 | 92.74 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 1 | 6 |
| 333 | 93.00 | temperature | 30.0 | 4320 | > th | dose dependent | sin | 7 | NA |
| 341 | 93.02 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 9 | 9 |
| 357 | 93.06 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 1 | 1 |
| 362 | 93.08 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 5 | 13 |
| 388 | 93.09 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 20 | 22 |
| 391 | 93.10 | wind | 1.0 | 14400 | < th | dose independent | rect. | 2 | 3 |
| 392 | 93.10 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 10 | 8 |
| 471 | 93.25 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 9 | 12 |
| 482 | 93.26 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 9 | 21 |
| 538 | 93.30 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 3 | 18 |
| 601 | 93.32 | temperature | 30.0 | 4320 | < th | dose independent | no | NA | NA |
| 645 | 93.33 | wind | 1.0 | 14400 | > th | dose independent | rect. | 2 | 3 |
| 696 | 93.36 | temperature | 30.0 | 4320 | > th | dose independent | no | NA | NA |
| 821 | 93.40 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 874 | 93.50 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 13 | 23 |
| 935 | 93.56 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 13 | 23 |