Os05g0381400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to ABA induced plasma membrane protein PM 19.
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Os05g0381400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to ABA induced plasma membrane protein PM 19.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 235.69 | 0.721 | 3.17 | -1.71 | 0.113 | 4.55 | -0.709 | -22.9 | -0.136 | 22.6 | 999.8 | 62 | -- | -- |
| 243.3 | 0.732 | 2.9 | -0.205 | 0.144 | 0.463 | -0.628 | -- | -0.137 | 22.5 | 999.8 | 62 | -- | -- |
| 237.64 | 0.718 | 3.17 | -1.65 | 0.132 | 4.47 | -- | -22.5 | -0.132 | 21.1 | 999.9 | 61 | -- | -- |
| 242.37 | 0.725 | 2.9 | -0.15 | 0.15 | 0.48 | -- | -- | -0.115 | 22 | 1002 | 50 | -- | -- |
| 238.62 | 0.719 | 3.16 | -1.67 | -- | 4.53 | -- | -22.8 | -0.133 | -- | 999.8 | 61 | -- | -- |
| 249.19 | 0.74 | 2.91 | -0.123 | 0.137 | -- | -0.651 | -- | -0.168 | 22.5 | -- | -- | -- | -- |
| 250.83 | 0.742 | 2.91 | -0.0954 | 0.149 | -- | -- | -- | -0.165 | 21.4 | -- | -- | -- | -- |
| 243.69 | 0.727 | 2.89 | -0.148 | -- | 0.478 | -- | -- | -0.114 | -- | 1002 | 55 | -- | -- |
| 242.97 | 0.726 | 2.9 | -- | 0.149 | 0.47 | -- | -- | -0.104 | 22 | 1002 | 50 | -- | -- |
| 252.12 | 0.742 | 2.91 | -0.0946 | -- | -- | -- | -- | -0.166 | -- | -- | -- | -- | -- |
| 251.07 | 0.741 | 2.91 | -- | 0.149 | -- | -- | -- | -0.155 | 21.3 | -- | -- | -- | -- |
| 244.27 | 0.728 | 2.89 | -- | -- | 0.466 | -- | -- | -0.099 | -- | 1002 | 55 | -- | -- |
| 252.36 | 0.741 | 2.9 | -- | -- | -- | -- | -- | -0.155 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 226.33 | wind | 5 | 90 | > th | dose independent | rect. | 5 | 2 |
| 3 | 226.34 | wind | 5 | 90 | > th | dose dependent | rect. | 5 | 2 |
| 7 | 226.38 | radiation | 20 | 90 | > th | dose independent | rect. | 6 | 1 |
| 21 | 226.38 | radiation | 20 | 90 | > th | dose dependent | rect. | 6 | 1 |
| 58 | 230.95 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 12 | 12 |
| 59 | 231.28 | humidity | 50 | 4320 | > th | dose independent | rect. | 13 | 2 |
| 63 | 231.75 | wind | 5 | 10 | > th | dose independent | rect. | 5 | 3 |
| 67 | 231.79 | wind | 5 | 10 | > th | dose independent | rect. | 7 | 1 |
| 78 | 231.92 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 7 | 17 |
| 86 | 232.24 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 9 | 15 |
| 133 | 233.92 | atmosphere | 1000 | 90 | < th | dose independent | sin | 17 | NA |
| 141 | 234.04 | atmosphere | 1000 | 90 | > th | dose independent | sin | 17 | NA |
| 154 | 234.29 | atmosphere | 1000 | 10 | > th | dose independent | sin | 16 | NA |
| 198 | 234.82 | wind | 1 | 14400 | > th | dose independent | rect. | 2 | 1 |
| 222 | 235.13 | wind | 1 | 14400 | < th | dose independent | rect. | 2 | 1 |
| 228 | 235.23 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 20 | 22 |
| 232 | 235.26 | temperature | 30 | 4320 | < th | dose independent | rect. | 9 | 1 |
| 249 | 235.34 | temperature | 25 | 4320 | > th | dose dependent | rect. | 13 | 2 |
| 261 | 235.42 | temperature | 30 | 4320 | < th | dose independent | rect. | 19 | 15 |
| 263 | 235.43 | temperature | 25 | 4320 | > th | dose dependent | rect. | 11 | 4 |
| 267 | 235.45 | temperature | 25 | 4320 | > th | dose dependent | rect. | 6 | 9 |
| 270 | 235.46 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 12 | 22 |
| 277 | 235.49 | temperature | 30 | 4320 | < th | dose independent | rect. | 24 | 10 |
| 281 | 235.50 | temperature | 30 | 4320 | < th | dose independent | rect. | 3 | 7 |
| 291 | 235.52 | temperature | 25 | 4320 | > th | dose dependent | rect. | 23 | 16 |
| 381 | 235.69 | temperature | 30 | 4320 | > th | dose independent | rect. | 9 | 1 |
| 409 | 235.75 | temperature | 30 | 4320 | > th | dose independent | rect. | 8 | 3 |
| 424 | 235.75 | temperature | 25 | 4320 | > th | dose dependent | sin | 4 | NA |
| 519 | 235.94 | temperature | 30 | 4320 | < th | dose independent | rect. | 19 | 19 |
| 628 | 236.06 | temperature | 30 | 4320 | < th | dose independent | sin | 8 | NA |
| 671 | 236.12 | atmosphere | 1000 | 30 | < th | dose dependent | rect. | 7 | 18 |
| 680 | 236.14 | temperature | 30 | 4320 | < th | dose independent | rect. | 11 | 3 |
| 690 | 236.17 | temperature | 30 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 708 | 236.17 | temperature | 25 | 4320 | > th | dose dependent | rect. | 6 | 1 |
| 715 | 236.19 | temperature | 30 | 4320 | > th | dose independent | sin | 8 | NA |
| 716 | 236.19 | temperature | 30 | 4320 | > th | dose independent | rect. | 11 | 3 |
| 737 | 236.20 | temperature | 10 | 4320 | > th | dose dependent | rect. | 13 | 1 |
| 750 | 236.23 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 9 | 23 |
| 773 | 236.28 | atmosphere | 1000 | 90 | < th | dose independent | no | NA | NA |
| 786 | 236.31 | temperature | 30 | 4320 | < th | dose independent | rect. | 13 | 1 |
| 799 | 236.33 | atmosphere | 1000 | 90 | > th | dose independent | no | NA | NA |
| 801 | 236.33 | temperature | 10 | 4320 | > th | dose dependent | rect. | 11 | 3 |
| 813 | 236.35 | wind | 1 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 877 | 236.43 | temperature | 25 | 4320 | > th | dose dependent | rect. | 6 | 19 |
| 924 | 236.47 | atmosphere | 1000 | 30 | < th | dose independent | rect. | 15 | 23 |
| 964 | 236.50 | temperature | 25 | 4320 | > th | dose dependent | no | NA | NA |