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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os05g0376600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : GCN5-related N-acetyltransferase domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.09 (0.0191) R2 : 0.00211
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0396 (0.0403) R2dN8 : 0.00273 R2N8 : 0.00211
σ : 0.36
deviance : 59.55
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
56.71 0.354 3.08 0.0377 0.161 0.129 -0.139 0.739 0.0494 7.4 73.06 4654 -- --
57.51 0.353 3.09 0.0555 0.153 0.198 -0.22 -- 0.0285 7.25 82.63 5738 -- --
56.72 0.351 3.08 0.0462 0.17 0.134 -- 0.772 0.0491 7.66 74.17 4934 -- --
57.45 0.353 3.09 0.0426 0.158 0.219 -- -- 0.0101 7.45 86.36 4253 -- --
58 0.355 3.09 0.078 -- 0.177 -- 0.735 0.0272 -- 81.93 5835 -- --
58.13 0.357 3.08 0.0486 0.155 -- -0.185 -- 0.0418 7.26 -- -- -- --
58.22 0.357 3.08 0.0451 0.154 -- -- -- 0.0424 7.55 -- -- -- --
58.69 0.357 3.09 0.0489 -- 0.248 -- -- 0.00961 -- 86.03 4291 -- --
57.49 0.353 3.09 -- 0.156 0.227 -- -- 0.00896 7.6 84.76 4237 -- --
59.49 0.36 3.09 0.0474 -- -- -- -- 0.0448 -- -- -- -- --
58.27 0.357 3.08 -- 0.154 -- -- -- 0.0374 7.53 -- -- -- --
58.75 0.357 3.09 -- -- 0.246 -- -- 0.00807 -- 85 4286 -- --
59.55 0.36 3.09 -- -- -- -- -- 0.0396 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 48.43 radiation 10.0 10 > th dose independent rect. 6 1
27 48.43 radiation 10.0 10 > th dose dependent rect. 6 1
57 52.59 wind 3.0 30 < th dose dependent rect. 6 1
58 52.72 atmosphere 1005.0 30 > th dose dependent rect. 6 1
61 52.90 wind 1.0 10 < th dose independent rect. 6 1
62 53.33 humidity 80.0 30 > th dose dependent rect. 6 1
78 53.84 temperature 30.0 30 < th dose dependent rect. 6 1
93 53.88 radiation 10.0 10 < th dose dependent rect. 6 1
97 54.09 temperature 25.0 90 < th dose independent rect. 6 1
100 54.26 atmosphere 1005.0 30 > th dose dependent rect. 2 5
125 54.85 temperature 20.0 30 > th dose independent rect. 6 1
127 54.86 wind 9.0 1440 < th dose independent rect. 7 1
128 54.86 temperature 10.0 1440 > th dose independent rect. 7 1
132 54.86 temperature 30.0 1440 < th dose independent rect. 7 1
136 54.86 humidity 50.0 1440 > th dose independent rect. 7 1
141 54.86 atmosphere 995.0 1440 > th dose independent rect. 7 1
142 54.86 atmosphere 1015.0 1440 < th dose independent rect. 7 1
143 54.86 temperature 10.0 1440 > th dose independent rect. 8 23
149 54.93 humidity 80.0 30 > th dose independent rect. 6 1
150 54.93 atmosphere 1005.0 30 > th dose independent rect. 6 1
151 54.94 humidity 90.0 30 < th dose independent rect. 6 1
157 54.98 temperature 10.0 30 > th dose independent rect. 6 1
160 54.98 humidity 50.0 30 > th dose independent rect. 6 1
164 54.98 atmosphere 1015.0 30 < th dose independent rect. 6 1
165 54.98 radiation 20.0 30 < th dose independent rect. 6 1
168 54.98 precipitation 0.1 30 < th dose independent rect. 6 1
169 54.98 temperature 10.0 30 > th dose independent rect. 7 23
171 54.98 precipitation 0.1 30 < th dose dependent rect. 6 1
173 54.99 wind 1.0 30 > th dose independent rect. 6 1
175 55.02 temperature 20.0 30 > th dose dependent rect. 2 1
176 55.05 temperature 20.0 30 > th dose independent rect. 2 1
178 55.08 atmosphere 1005.0 30 > th dose independent rect. 2 1
180 55.09 atmosphere 1000.0 30 > th dose dependent rect. 2 1
187 55.12 atmosphere 1010.0 10 < th dose independent sin 6 NA
190 55.15 wind 3.0 30 < th dose independent rect. 2 1
192 55.16 wind 5.0 30 < th dose dependent rect. 2 1
197 55.17 humidity 80.0 30 > th dose independent rect. 2 1
200 55.18 temperature 10.0 30 > th dose independent rect. 2 1
202 55.18 temperature 30.0 30 < th dose independent rect. 2 1
203 55.18 humidity 50.0 30 > th dose independent rect. 2 1
207 55.18 atmosphere 1010.0 30 < th dose independent rect. 2 1
209 55.18 radiation 1.0 30 < th dose independent rect. 2 1
214 55.18 precipitation 0.1 30 < th dose independent rect. 2 1
215 55.18 temperature 10.0 30 > th dose independent rect. 3 23
217 55.18 humidity 50.0 30 > th dose dependent rect. 2 1
220 55.18 radiation 1.0 30 < th dose dependent rect. 2 1
225 55.18 precipitation 0.1 30 < th dose dependent rect. 2 1
235 55.25 radiation 10.0 30 > th dose independent sin 11 NA
238 55.27 temperature 10.0 30 > th dose dependent rect. 6 1
242 55.35 wind 9.0 30 < th dose independent rect. 7 23
259 55.36 atmosphere 1015.0 30 < th dose dependent rect. 2 1
264 55.41 wind 1.0 30 > th dose independent rect. 2 1
267 55.44 temperature 30.0 30 < th dose dependent rect. 2 1
271 55.50 wind 3.0 270 > th dose independent rect. 3 1
284 55.59 radiation 1.0 43200 < th dose dependent rect. 3 1
287 55.61 humidity 90.0 90 < th dose independent rect. 2 5
294 55.68 humidity 70.0 1440 < th dose independent rect. 10 1
299 55.73 atmosphere 1010.0 10 < th dose independent rect. 23 13
305 55.75 atmosphere 1010.0 10 < th dose independent rect. 3 9
309 55.77 humidity 70.0 1440 > th dose independent rect. 10 1
313 55.80 precipitation 0.1 30 < th dose independent rect. 7 23
314 55.80 atmosphere 1005.0 270 > th dose dependent rect. 2 2
316 55.80 precipitation 0.1 30 < th dose dependent rect. 7 23
321 55.83 temperature 20.0 30 > th dose dependent rect. 2 5
325 55.85 wind 9.0 30 < th dose independent rect. 3 23
362 55.92 atmosphere 1000.0 30 > th dose independent rect. 7 23
392 56.02 humidity 80.0 14400 < th dose dependent rect. 7 2
406 56.05 wind 3.0 30 < th dose dependent rect. 2 6
407 56.06 wind 9.0 1440 < th dose independent rect. 3 1
408 56.06 temperature 10.0 1440 > th dose independent rect. 3 1
411 56.06 temperature 30.0 1440 < th dose independent rect. 3 1
415 56.06 humidity 50.0 1440 > th dose independent rect. 3 1
424 56.06 atmosphere 995.0 1440 > th dose independent rect. 3 1
425 56.06 radiation 1.0 1440 < th dose independent rect. 3 1
445 56.06 temperature 10.0 1440 > th dose independent rect. 4 23
464 56.10 humidity 70.0 14400 > th dose independent rect. 4 5
473 56.10 wind 1.0 14400 < th dose dependent rect. 6 1
477 56.11 humidity 70.0 14400 > th dose independent rect. 6 3
485 56.13 atmosphere 1010.0 10 < th dose independent rect. 3 23
506 56.16 humidity 70.0 14400 < th dose independent rect. 8 1
512 56.17 atmosphere 1010.0 10 < th dose independent rect. 3 12
515 56.18 radiation 10.0 30 < th dose independent sin 11 NA
523 56.22 humidity 70.0 14400 < th dose independent rect. 6 3
539 56.23 wind 1.0 30 > th dose independent rect. 7 23
548 56.28 precipitation 0.1 720 < th dose independent rect. 19 8
552 56.28 precipitation 0.1 720 < th dose dependent rect. 19 8
554 56.30 atmosphere 995.0 720 > th dose independent rect. 7 8
566 56.32 humidity 70.0 1440 > th dose independent rect. 3 8
569 56.32 humidity 70.0 1440 > th dose independent rect. 20 15
585 56.34 atmosphere 995.0 720 > th dose independent rect. 3 16
586 56.34 atmosphere 995.0 720 > th dose independent rect. 23 16
589 56.35 wind 1.0 14400 < th dose independent rect. 6 1
592 56.36 temperature 25.0 10 > th dose independent rect. 3 5
595 56.36 atmosphere 995.0 720 > th dose independent rect. 15 16
600 56.37 temperature 25.0 720 > th dose independent rect. 21 1
603 56.37 humidity 60.0 14400 < th dose dependent rect. 12 1
609 56.38 wind 9.0 720 < th dose independent rect. 19 8
610 56.38 temperature 10.0 720 > th dose independent rect. 7 8
611 56.38 atmosphere 1015.0 720 < th dose independent rect. 7 8
612 56.38 temperature 10.0 720 > th dose independent rect. 15 16
615 56.38 atmosphere 1015.0 30 < th dose dependent rect. 6 1
619 56.39 precipitation 0.1 720 < th dose independent rect. 15 16
622 56.39 precipitation 0.1 720 < th dose dependent rect. 15 16
625 56.40 temperature 25.0 90 < th dose independent rect. 5 4
626 56.40 temperature 10.0 720 > th dose independent rect. 19 8
627 56.40 temperature 30.0 720 < th dose independent rect. 19 8
628 56.40 humidity 50.0 720 > th dose independent rect. 19 8
629 56.40 atmosphere 995.0 720 > th dose independent rect. 19 8
630 56.40 radiation 1.0 720 < th dose independent rect. 19 8
637 56.40 temperature 10.0 720 > th dose independent rect. 3 16
638 56.40 radiation 1.0 30 > th dose independent rect. 7 23
641 56.40 radiation 1.0 720 < th dose dependent rect. 19 8
650 56.41 precipitation 0.1 720 < th dose independent rect. 15 8
663 56.41 precipitation 0.1 720 < th dose dependent rect. 15 8
704 56.43 humidity 90.0 10 < th dose dependent rect. 6 1
725 56.45 precipitation 0.1 720 < th dose independent rect. 7 8
729 56.45 temperature 30.0 270 < th dose independent rect. 8 23
740 56.45 precipitation 0.1 720 < th dose dependent rect. 7 8
752 56.46 humidity 50.0 30 > th dose independent rect. 7 23
769 56.48 wind 1.0 14400 > th dose independent rect. 6 1
777 56.48 temperature 25.0 1440 > th dose dependent rect. 2 7
781 56.49 atmosphere 1010.0 10 < th dose independent rect. 23 16
787 56.49 humidity 90.0 4320 < th dose dependent rect. 23 14
788 56.50 temperature 10.0 720 > th dose independent rect. 15 8
789 56.50 temperature 25.0 720 > th dose independent rect. 23 12
791 56.50 temperature 10.0 720 > th dose independent rect. 23 16
793 56.50 humidity 50.0 4320 > th dose dependent rect. 11 1
795 56.50 humidity 60.0 4320 < th dose dependent rect. 14 1
823 56.52 temperature 25.0 1440 > th dose independent rect. 3 6
827 56.52 atmosphere 1010.0 10 < th dose independent rect. 23 10
840 56.52 humidity 50.0 4320 > th dose dependent rect. 2 11
864 56.53 precipitation 0.1 30 < th dose independent rect. 3 23
880 56.53 wind 3.0 30 < th dose dependent rect. 2 11
881 56.53 humidity 90.0 4320 < th dose dependent rect. 2 11
895 56.53 precipitation 0.1 30 < th dose dependent rect. 3 23
905 56.54 wind 1.0 14400 < th dose dependent rect. 4 4
959 56.55 precipitation 0.1 720 < th dose independent rect. 11 16
961 56.55 atmosphere 1000.0 30 > th dose independent rect. 3 23