Os05g0376300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0376300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 18.15 | 0.2 | 11.3 | -0.225 | 0.0927 | -0.497 | 0.489 | -0.662 | 0.266 | 3.69 | 26.14 | 6 | -- | -- |
| 18.67 | 0.203 | 11.3 | -0.332 | 0.098 | -0.444 | 0.26 | -- | 0.244 | 4.86 | 26.51 | 5 | -- | -- |
| 18.59 | 0.202 | 11.3 | -0.273 | 0.0964 | -0.455 | -- | -0.361 | 0.259 | 5.36 | 26.11 | 2 | -- | -- |
| 18.82 | 0.203 | 11.3 | -0.329 | 0.0938 | -0.432 | -- | -- | 0.246 | 5.51 | 26.2 | 2 | -- | -- |
| 18.99 | 0.203 | 11.3 | -0.266 | -- | -0.423 | -- | -0.349 | 0.268 | -- | 25.7 | 2 | -- | -- |
| 21.61 | 0.218 | 11.3 | -0.226 | 0.0963 | -- | -0.0706 | -- | 0.34 | 10.5 | -- | -- | -- | -- |
| 21.62 | 0.218 | 11.3 | -0.229 | 0.0975 | -- | -- | -- | 0.34 | 10.2 | -- | -- | -- | -- |
| 19.21 | 0.205 | 11.3 | -0.32 | -- | -0.403 | -- | -- | 0.256 | -- | 25.7 | 3 | -- | -- |
| 21.43 | 0.217 | 11.3 | -- | 0.0772 | -0.309 | -- | -- | 0.306 | 7.01 | 26.2 | 5 | -- | -- |
| 22.2 | 0.22 | 11.3 | -0.23 | -- | -- | -- | -- | 0.34 | -- | -- | -- | -- | -- |
| 23 | 0.224 | 11.3 | -- | 0.0987 | -- | -- | -- | 0.365 | 10.4 | -- | -- | -- | -- |
| 21.73 | 0.218 | 11.3 | -- | -- | -0.308 | -- | -- | 0.309 | -- | 25.7 | 4 | -- | -- |
| 23.6 | 0.227 | 11.3 | -- | -- | -- | -- | -- | 0.365 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 17.45 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 13 | 18 |
| 8 | 17.64 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 3 | 6 |
| 14 | 17.77 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 17 | 9 |
| 18 | 17.79 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 3 | 6 |
| 24 | 17.83 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 3 | 6 |
| 27 | 17.83 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 3 | 6 |
| 43 | 17.87 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 12 | 21 |
| 65 | 17.93 | temperature | 25.0 | 270 | < th | dose independent | rect. | 11 | 19 |
| 168 | 18.15 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 17 | 18 |
| 182 | 18.18 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 2 |
| 195 | 18.20 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 13 |
| 196 | 18.20 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 13 |
| 201 | 18.20 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 13 |
| 206 | 18.21 | wind | 1.0 | 1440 | < th | dose independent | rect. | 12 | 1 |
| 211 | 18.23 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 2 |
| 215 | 18.23 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 2 |
| 260 | 18.29 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 18 | 16 |
| 262 | 18.29 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 274 | 18.31 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 280 | 18.33 | wind | 1.0 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 282 | 18.33 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 299 | 18.34 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 10 | 11 |
| 307 | 18.35 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 9 | 13 |
| 316 | 18.35 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 317 | 18.36 | temperature | 25.0 | 10 | < th | dose dependent | no | NA | NA |
| 318 | 18.36 | temperature | 25.0 | 90 | < th | dose dependent | no | NA | NA |
| 319 | 18.36 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 4 | NA |
| 329 | 18.36 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 330 | 18.37 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 3 | NA |
| 331 | 18.37 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 3 | NA |
| 333 | 18.37 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 3 | NA |
| 342 | 18.37 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 356 | 18.38 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 357 | 18.38 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 358 | 18.38 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 393 | 18.42 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 397 | 18.43 | temperature | 25.0 | 720 | > th | dose independent | rect. | 15 | 4 |
| 448 | 18.47 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 18 | 18 |
| 455 | 18.48 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 505 | 18.52 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 508 | 18.52 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 8 | 8 |
| 534 | 18.53 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 556 | 18.54 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 19 | 12 |
| 574 | 18.55 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 12 | 1 |
| 587 | 18.56 | temperature | 25.0 | 720 | < th | dose independent | rect. | 11 | 10 |
| 602 | 18.57 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 3 |
| 607 | 18.57 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 21 | 9 |
| 613 | 18.58 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 645 | 18.60 | wind | 3.0 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 646 | 18.60 | radiation | 40.0 | 4320 | > th | dose independent | rect. | 15 | 17 |
| 648 | 18.60 | humidity | 60.0 | 14400 | < th | dose dependent | sin | 2 | NA |
| 656 | 18.61 | wind | 3.0 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 664 | 18.61 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 708 | 18.64 | wind | 9.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 732 | 18.66 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 5 | 3 |
| 733 | 18.66 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 23 | 3 |
| 750 | 18.67 | temperature | 20.0 | 90 | > th | dose dependent | sin | 9 | NA |
| 825 | 18.69 | temperature | 25.0 | 270 | < th | dose dependent | sin | 16 | NA |
| 828 | 18.69 | humidity | 60.0 | 14400 | < th | dose dependent | no | NA | NA |
| 912 | 18.70 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 7 |
| 958 | 18.70 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 11 | 23 |
| 960 | 18.71 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 962 | 18.71 | wind | 1.0 | 1440 | < th | dose independent | rect. | 12 | 7 |
| 963 | 18.71 | temperature | 25.0 | 720 | < th | dose independent | rect. | 13 | 8 |
| 971 | 18.71 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 12 | 7 |
| 972 | 18.71 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 22 | 10 |