Os05g0371200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to 26S proteasome non-ATPase regulatory subunit 14 (26S proteasome regulatory subunit rpn11).
FiT-DB / Search/ Help/ Sample detail
|
Os05g0371200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to 26S proteasome non-ATPase regulatory subunit 14 (26S proteasome regulatory subunit rpn11).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 8.55 | 0.137 | 11.5 | -0.253 | 0.158 | 0.704 | 0.0724 | 0.169 | 0.109 | 17.8 | 31.21 | 29 | -- | -- |
| 8.59 | 0.136 | 11.5 | -0.229 | 0.158 | 0.708 | 0.0359 | -- | 0.113 | 17.8 | 31.34 | 28 | -- | -- |
| 8.56 | 0.136 | 11.5 | -0.249 | 0.159 | 0.706 | -- | 0.145 | 0.111 | 17.7 | 31.17 | 28 | -- | -- |
| 8.59 | 0.136 | 11.5 | -0.227 | 0.158 | 0.709 | -- | -- | 0.116 | 17.7 | 31.3 | 28 | -- | -- |
| 9.59 | 0.145 | 11.5 | -0.274 | -- | 0.608 | -- | 0.116 | 0.091 | -- | 31.17 | 28 | -- | -- |
| 14.64 | 0.179 | 11.5 | -0.38 | 0.174 | -- | 0.223 | -- | -0.00695 | 23.7 | -- | -- | -- | -- |
| 14.85 | 0.18 | 11.5 | -0.389 | 0.173 | -- | -- | -- | -0.00777 | 23.6 | -- | -- | -- | -- |
| 9.6 | 0.145 | 11.5 | -0.256 | -- | 0.612 | -- | -- | 0.0954 | -- | 31.3 | 28 | -- | -- |
| 9.81 | 0.146 | 11.4 | -- | 0.178 | 0.799 | -- | -- | 0.153 | 17.1 | 31.22 | 28 | -- | -- |
| 16.74 | 0.191 | 11.5 | -0.384 | -- | -- | -- | -- | -0.0058 | -- | -- | -- | -- | -- |
| 18.84 | 0.203 | 11.5 | -- | 0.169 | -- | -- | -- | 0.0356 | 23.4 | -- | -- | -- | -- |
| 11.2 | 0.156 | 11.4 | -- | -- | 0.678 | -- | -- | 0.141 | -- | 30.74 | 15 | -- | -- |
| 20.63 | 0.212 | 11.5 | -- | -- | -- | -- | -- | 0.0368 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 8.24 | temperature | 30 | 30 | < th | dose dependent | sin | 1 | NA |
| 2 | 8.25 | temperature | 10 | 90 | > th | dose dependent | sin | 3 | NA |
| 17 | 8.31 | temperature | 30 | 270 | < th | dose dependent | rect. | 23 | 22 |
| 21 | 8.33 | temperature | 10 | 270 | > th | dose dependent | sin | 5 | NA |
| 33 | 8.40 | temperature | 25 | 270 | < th | dose dependent | rect. | 3 | 18 |
| 55 | 8.51 | temperature | 30 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 69 | 8.61 | temperature | 30 | 30 | < th | dose dependent | no | NA | NA |
| 72 | 8.61 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 73 | 8.61 | temperature | 30 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 74 | 8.62 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 79 | 8.63 | temperature | 30 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 115 | 8.74 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 116 | 8.74 | temperature | 30 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 131 | 8.78 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 136 | 8.79 | temperature | 15 | 90 | > th | dose dependent | rect. | 3 | 23 |
| 138 | 8.80 | temperature | 15 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 140 | 8.80 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 145 | 8.81 | temperature | 30 | 720 | < th | dose dependent | rect. | 20 | 18 |
| 151 | 8.83 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 13 |
| 161 | 8.84 | temperature | 15 | 90 | > th | dose dependent | rect. | 8 | 23 |
| 167 | 8.85 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 213 | 8.94 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 229 | 8.97 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 23 |
| 266 | 9.02 | temperature | 15 | 720 | > th | dose dependent | rect. | 20 | 17 |
| 282 | 9.03 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 293 | 9.04 | temperature | 15 | 10 | > th | dose dependent | rect. | 8 | 23 |
| 327 | 9.07 | temperature | 15 | 90 | > th | dose dependent | rect. | 20 | 23 |
| 342 | 9.09 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 12 |
| 420 | 9.16 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 481 | 9.21 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 9 |
| 490 | 9.21 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 491 | 9.21 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 513 | 9.24 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 13 |
| 543 | 9.26 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 720 | 9.39 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 23 |
| 924 | 9.54 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 23 |