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Os05g0365200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.07 (0.0227) R2 : 0.474
β1 : 1.18 (0.083) R2dD : 0.24 R2D : 0.136
β2 : 0.748 (0.0569) R2dC : 0.199 R2C : 0.147
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.476 (0.0484) R2dN8 : 0.15 R2N8 : 0.0444
σ : 0.426
deviance : 82.85
__
_____
C
peak time of C : 15.5
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
76.42 0.411 7.08 1.01 0.741 -0.805 0.0473 -0.877 0.415 15.5 9.701 2412 -- --
76.49 0.407 7.09 1.04 0.74 -0.631 0.0548 -- 0.415 15.5 9.736 2417 -- --
76.41 0.407 7.08 1.01 0.739 -0.809 -- -0.892 0.413 15.5 9.8 2417 -- --
76.49 0.407 7.09 1.04 0.741 -0.635 -- -- 0.411 15.5 9.8 2417 -- --
107 0.482 7.08 0.987 -- -0.758 -- -0.493 0.391 -- 9.7 2453 -- --
82.85 0.427 7.07 1.18 0.748 -- -0.0226 -- 0.476 15.5 -- -- -- --
82.85 0.426 7.07 1.18 0.748 -- -- -- 0.476 15.5 -- -- -- --
107.03 0.482 7.09 0.998 -- -0.669 -- -- 0.39 -- 9.7 2452 -- --
99.44 0.464 7.11 -- 0.678 -0.569 -- -- 0.389 15.5 9.446 17059 -- --
114.2 0.499 7.07 1.14 -- -- -- -- 0.456 -- -- -- -- --
119.32 0.511 7.1 -- 0.725 -- -- -- 0.345 15.5 -- -- -- --
126.84 0.525 7.12 -- -- -0.653 -- -- 0.35 -- 8.56 18209 -- --
148.77 0.569 7.1 -- -- -- -- -- 0.329 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 76.25 wind 7.0 270 < th dose independent rect. 6 22
2 76.32 wind 9.0 1440 < th dose independent rect. 24 5
4 76.35 precipitation 0.1 14400 > th dose dependent rect. 16 2
6 76.37 wind 9.0 4320 < th dose independent rect. 19 8
8 76.44 wind 9.0 4320 > th dose independent rect. 19 2
14 76.64 wind 7.0 10 < th dose independent rect. 8 21
15 76.66 wind 7.0 270 < th dose independent rect. 7 19
16 76.68 wind 9.0 4320 < th dose independent rect. 19 2
17 76.68 wind 5.0 720 < th dose independent rect. 22 13
21 76.75 temperature 20.0 10 > th dose independent rect. 17 15
23 76.77 wind 9.0 4320 > th dose independent rect. 19 4
24 76.77 wind 7.0 4320 > th dose independent rect. 19 7
29 76.78 wind 7.0 270 < th dose independent rect. 18 23
30 76.78 wind 7.0 4320 > th dose dependent rect. 19 6
42 76.81 wind 7.0 4320 > th dose dependent rect. 19 4
49 76.82 wind 5.0 90 > th dose dependent rect. 16 19
58 76.84 wind 9.0 4320 > th dose dependent rect. 19 2
63 76.84 wind 9.0 1440 > th dose dependent rect. 20 16
68 76.85 wind 7.0 270 < th dose independent rect. 9 17
98 76.90 wind 9.0 4320 < th dose independent rect. 16 11
103 76.91 temperature 20.0 10 > th dose independent rect. 5 3
108 76.92 wind 7.0 720 > th dose independent rect. 20 16
119 76.94 wind 9.0 4320 > th dose dependent rect. 16 8
125 76.95 wind 5.0 270 < th dose independent rect. 21 16
129 76.98 wind 9.0 4320 < th dose independent rect. 24 3
134 76.98 temperature 20.0 10 > th dose dependent rect. 17 15
138 76.99 wind 9.0 4320 > th dose independent rect. 16 10
144 77.00 wind 9.0 4320 > th dose independent rect. 16 8
182 77.07 wind 9.0 1440 > th dose dependent sin 8 NA
189 77.09 wind 7.0 720 > th dose independent rect. 22 13
201 77.12 temperature 20.0 10 > th dose independent rect. 11 21
202 77.13 wind 1.0 43200 < th dose independent rect. 1 2
219 77.16 wind 9.0 1440 < th dose independent rect. 19 17
227 77.17 atmosphere 1015.0 30 < th dose independent rect. 17 15
231 77.18 radiation 20.0 4320 < th dose independent rect. 17 7
245 77.21 temperature 20.0 270 > th dose independent rect. 2 4
252 77.22 precipitation 0.1 14400 > th dose independent rect. 16 2
257 77.22 radiation 10.0 270 < th dose independent rect. 16 15
274 77.26 precipitation 0.1 14400 < th dose independent rect. 16 2
279 77.26 wind 9.0 4320 > th dose dependent sin 11 NA
281 77.26 precipitation 0.1 14400 < th dose dependent rect. 16 2
285 77.27 wind 9.0 4320 < th dose independent sin 11 NA
297 77.29 precipitation 0.1 14400 > th dose dependent rect. 21 7
307 77.31 wind 7.0 270 < th dose independent rect. 7 9
317 77.33 wind 7.0 1440 > th dose independent sin 9 NA
329 77.35 wind 1.0 43200 < th dose independent rect. 4 2
355 77.38 precipitation 0.1 14400 > th dose dependent rect. 16 5
359 77.39 wind 7.0 1440 < th dose independent sin 9 NA
379 77.40 wind 9.0 4320 > th dose dependent rect. 16 20
390 77.42 wind 5.0 1440 > th dose independent rect. 7 1
421 77.45 wind 1.0 43200 < th dose dependent rect. 2 5
425 77.46 wind 1.0 43200 < th dose independent rect. 2 5
429 77.46 precipitation 0.1 14400 < th dose independent rect. 21 7
435 77.46 precipitation 0.1 14400 < th dose dependent rect. 21 7
441 77.47 precipitation 0.1 14400 > th dose independent rect. 21 8
447 77.47 temperature 20.0 10 > th dose independent rect. 5 18
450 77.47 atmosphere 1015.0 270 < th dose independent rect. 1 22
457 77.48 precipitation 0.1 14400 < th dose independent rect. 13 16
460 77.48 precipitation 0.1 14400 > th dose dependent rect. 18 10
462 77.48 precipitation 0.1 14400 < th dose dependent rect. 13 16
463 77.49 wind 9.0 1440 < th dose independent rect. 22 7
471 77.50 precipitation 0.1 14400 > th dose independent rect. 13 16
474 77.50 wind 9.0 4320 > th dose dependent rect. 16 2
477 77.51 precipitation 0.1 14400 > th dose independent rect. 18 11
479 77.51 radiation 10.0 270 < th dose independent rect. 14 17
482 77.51 wind 9.0 4320 < th dose independent rect. 16 20
487 77.52 precipitation 0.1 14400 < th dose independent rect. 18 11
491 77.52 wind 5.0 1440 > th dose dependent rect. 7 2
492 77.52 precipitation 0.1 14400 < th dose dependent rect. 18 11
496 77.53 wind 1.0 43200 > th dose independent rect. 4 2
510 77.53 precipitation 0.1 14400 > th dose dependent rect. 21 20
511 77.54 wind 1.0 43200 > th dose independent rect. 1 5
596 77.60 wind 5.0 90 > th dose independent rect. 16 19
610 77.61 humidity 70.0 10 > th dose independent rect. 17 15
645 77.63 precipitation 0.1 14400 > th dose independent rect. 21 20
646 77.63 precipitation 0.1 14400 < th dose independent rect. 21 20
649 77.63 precipitation 0.1 14400 > th dose dependent rect. 16 12
652 77.63 precipitation 0.1 14400 > th dose dependent rect. 13 16
656 77.63 precipitation 0.1 14400 < th dose dependent rect. 21 20
667 77.64 wind 1.0 43200 < th dose dependent rect. 4 2
693 77.66 wind 7.0 30 < th dose independent rect. 8 9
715 77.68 wind 7.0 1440 < th dose independent rect. 8 1
749 77.71 wind 1.0 43200 > th dose independent rect. 1 2
762 77.71 wind 9.0 90 < th dose dependent rect. 8 20
805 77.74 precipitation 0.1 14400 > th dose dependent rect. 13 8
822 77.75 precipitation 0.1 14400 > th dose dependent rect. 20 2
862 77.78 precipitation 0.1 14400 > th dose independent sin 12 NA
863 77.78 precipitation 0.1 14400 < th dose independent sin 12 NA
870 77.78 temperature 20.0 10 > th dose independent rect. 15 21
872 77.78 precipitation 0.1 14400 < th dose dependent sin 12 NA
894 77.79 wind 7.0 270 > th dose independent rect. 14 22
914 77.80 radiation 40.0 10 < th dose independent rect. 8 21
932 77.81 temperature 15.0 10 > th dose independent rect. 23 6
941 77.81 precipitation 0.1 14400 > th dose independent rect. 18 23
942 77.81 precipitation 0.1 14400 < th dose independent rect. 18 23
956 77.81 wind 9.0 90 < th dose dependent rect. 7 22
957 77.81 precipitation 0.1 14400 < th dose dependent rect. 18 23