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Os05g0361200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Ferrochelatase.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.6 (0.0192) R2 : 0.00377
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0531 (0.0404) R2dN8 : 0.00487 R2N8 : 0.00377
σ : 0.362
deviance : 60.07
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
25.75 0.238 12.7 -0.396 0.595 -0.221 -0.262 -0.164 -0.176 19.1 24.98 275 -- --
25.68 0.236 12.7 -0.44 0.565 -0.248 -0.22 -- -0.185 19.1 25.2 325 -- --
25.81 0.237 12.7 -0.397 0.614 -0.211 -- -0.15 -0.175 19 24.67 266 -- --
25.78 0.236 12.7 -0.444 0.562 -0.248 -- -- -0.189 19.1 25.23 325 -- --
38.4 0.289 12.7 -0.339 -- -0.463 -- -0.338 -0.27 -- 25.62 364 -- --
28.41 0.25 12.7 -0.374 0.728 -- -0.128 -- -0.0814 18.7 -- -- -- --
28.45 0.25 12.7 -0.372 0.728 -- -- -- -0.0818 18.7 -- -- -- --
36.89 0.283 12.7 -0.521 -- -0.546 -- -- -0.302 -- 25.7 375 -- --
30.73 0.258 12.7 -- 0.612 -0.173 -- -- -0.111 18.9 25.3 325 -- --
56.08 0.35 12.7 -0.389 -- -- -- -- -0.0963 -- -- -- -- --
32.1 0.265 12.7 -- 0.732 -- -- -- -0.0403 18.7 -- -- -- --
44.07 0.309 12.7 -- -- -0.484 -- -- -0.226 -- 25.65 364 -- --
60.07 0.362 12.6 -- -- -- -- -- -0.0531 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 20.54 temperature 15.0 10 > th dose dependent rect. 23 6
2 20.65 temperature 15.0 90 > th dose dependent rect. 23 5
3 20.74 temperature 20.0 10 > th dose independent rect. 23 6
4 20.77 temperature 15.0 270 > th dose dependent rect. 21 5
5 20.81 temperature 20.0 90 > th dose independent rect. 23 5
13 21.13 temperature 10.0 270 > th dose dependent rect. 20 7
14 21.14 temperature 10.0 90 > th dose dependent rect. 7 21
21 21.28 temperature 15.0 270 > th dose dependent rect. 23 2
23 21.29 temperature 10.0 270 > th dose dependent rect. 7 19
24 21.30 temperature 10.0 10 > th dose dependent rect. 7 22
26 21.39 temperature 20.0 270 > th dose independent rect. 23 2
29 21.42 temperature 10.0 90 > th dose dependent rect. 9 19
56 21.75 temperature 20.0 90 > th dose independent rect. 9 19
57 21.75 temperature 20.0 90 > th dose independent rect. 7 21
72 21.96 temperature 20.0 10 > th dose independent rect. 7 22
143 22.50 atmosphere 1000.0 10 > th dose dependent rect. 5 2
161 22.59 atmosphere 1010.0 90 < th dose independent rect. 23 5
168 22.63 atmosphere 995.0 90 > th dose dependent rect. 17 14
173 22.67 atmosphere 995.0 270 > th dose independent rect. 17 14
176 22.69 radiation 1.0 90 > th dose independent rect. 4 3
187 22.70 radiation 1.0 30 > th dose dependent rect. 5 2
240 22.78 radiation 40.0 270 < th dose dependent rect. 16 15
241 22.80 atmosphere 1015.0 10 < th dose independent rect. 23 6
252 22.83 radiation 20.0 270 < th dose independent rect. 16 15
254 22.84 atmosphere 1010.0 270 < th dose independent rect. 23 2
263 22.87 radiation 10.0 90 < th dose independent rect. 4 19
265 22.88 precipitation 0.1 270 < th dose independent rect. 17 14
266 22.88 radiation 1.0 10 < th dose dependent sin 8 NA
268 22.88 precipitation 0.1 270 < th dose dependent rect. 17 14
271 22.89 radiation 10.0 10 < th dose independent rect. 5 19
272 22.89 temperature 15.0 10 > th dose dependent rect. 5 2
276 22.91 atmosphere 995.0 270 > th dose dependent rect. 3 4
278 22.93 atmosphere 1015.0 90 < th dose independent rect. 7 22
280 22.94 wind 9.0 270 < th dose independent rect. 7 10
281 22.94 atmosphere 995.0 90 > th dose independent rect. 4 19
312 22.99 atmosphere 995.0 30 > th dose dependent rect. 17 16
315 23.00 temperature 15.0 90 > th dose independent rect. 4 19
321 23.03 atmosphere 1000.0 10 > th dose independent rect. 7 23
328 23.06 atmosphere 1005.0 10 > th dose independent rect. 5 2
329 23.06 atmosphere 995.0 270 > th dose dependent rect. 15 16
330 23.07 wind 9.0 90 < th dose independent rect. 23 5
331 23.07 temperature 10.0 90 > th dose independent rect. 23 5
332 23.07 temperature 30.0 90 < th dose independent rect. 23 5
333 23.07 humidity 50.0 90 > th dose independent rect. 23 5
336 23.07 atmosphere 995.0 90 > th dose independent rect. 23 5
337 23.07 radiation 1.0 90 < th dose independent rect. 23 5
344 23.07 atmosphere 1015.0 10 < th dose independent rect. 7 22
347 23.07 radiation 1.0 90 < th dose dependent rect. 23 5
355 23.08 atmosphere 1005.0 90 > th dose independent rect. 5 2
356 23.09 wind 3.0 90 < th dose independent rect. 5 2
359 23.09 atmosphere 995.0 270 > th dose independent rect. 2 19
360 23.09 wind 9.0 90 < th dose independent rect. 7 22
361 23.09 atmosphere 995.0 270 > th dose independent rect. 1 22
382 23.13 temperature 10.0 270 > th dose independent rect. 7 10
383 23.13 atmosphere 1015.0 270 < th dose independent rect. 7 10
384 23.13 temperature 10.0 270 > th dose independent rect. 17 14
399 23.15 radiation 20.0 10 < th dose dependent rect. 5 19
401 23.16 precipitation 0.1 270 < th dose independent rect. 1 22
402 23.16 wind 7.0 90 < th dose dependent rect. 5 2
404 23.16 precipitation 0.1 270 < th dose dependent rect. 1 22
405 23.17 wind 3.0 10 < th dose independent rect. 5 2
417 23.19 precipitation 0.1 90 < th dose independent rect. 4 19
420 23.19 precipitation 0.1 90 < th dose dependent rect. 4 19
423 23.20 atmosphere 1000.0 10 > th dose independent rect. 5 18
426 23.20 radiation 1.0 10 < th dose dependent rect. 23 7
428 23.21 wind 7.0 270 < th dose independent rect. 23 2
430 23.21 precipitation 0.1 270 < th dose independent rect. 7 10
436 23.21 precipitation 0.1 270 < th dose dependent rect. 7 10
438 23.22 radiation 1.0 10 > th dose independent sin 8 NA
439 23.22 radiation 1.0 10 < th dose independent sin 8 NA
441 23.22 radiation 20.0 90 < th dose independent rect. 5 2
442 23.22 precipitation 0.1 90 < th dose independent rect. 5 2
443 23.22 precipitation 0.1 90 < th dose independent rect. 23 5
446 23.22 precipitation 0.1 90 < th dose dependent rect. 5 2
447 23.22 precipitation 0.1 90 < th dose dependent rect. 23 5
451 23.23 temperature 10.0 270 > th dose independent rect. 23 2
452 23.23 temperature 30.0 270 < th dose independent rect. 23 2
453 23.23 humidity 50.0 270 > th dose independent rect. 23 2
456 23.23 atmosphere 995.0 270 > th dose independent rect. 23 2
457 23.23 radiation 1.0 270 < th dose independent rect. 23 2
464 23.23 temperature 10.0 270 > th dose independent rect. 1 22
466 23.23 radiation 1.0 270 < th dose dependent rect. 23 2
472 23.23 radiation 20.0 90 < th dose dependent rect. 4 19
474 23.24 humidity 70.0 90 > th dose independent rect. 5 2
475 23.24 precipitation 0.1 270 < th dose independent rect. 23 2
477 23.24 wind 9.0 270 < th dose independent rect. 17 14
479 23.24 precipitation 0.1 270 < th dose dependent rect. 23 2
485 23.25 temperature 10.0 90 > th dose independent rect. 5 2
487 23.25 temperature 30.0 90 < th dose independent rect. 5 2
488 23.25 humidity 50.0 90 > th dose independent rect. 5 2
491 23.25 atmosphere 1015.0 90 < th dose independent rect. 5 2
494 23.25 humidity 50.0 270 > th dose independent rect. 17 14
496 23.25 temperature 10.0 90 > th dose independent rect. 7 22
503 23.26 humidity 50.0 90 > th dose dependent rect. 23 5
519 23.29 radiation 1.0 10 < th dose independent rect. 23 7
537 23.31 atmosphere 995.0 10 > th dose dependent rect. 5 18
538 23.32 wind 5.0 270 < th dose independent rect. 3 4
542 23.34 wind 9.0 90 < th dose dependent rect. 23 5
547 23.35 atmosphere 1015.0 90 < th dose independent rect. 9 19
549 23.35 wind 9.0 10 < th dose independent rect. 7 22
553 23.36 radiation 10.0 10 < th dose independent rect. 5 5
554 23.36 precipitation 0.1 270 < th dose independent rect. 2 19
557 23.36 precipitation 0.1 270 < th dose dependent rect. 2 19
563 23.38 wind 9.0 90 < th dose independent rect. 4 19
568 23.39 wind 9.0 10 < th dose independent rect. 23 6
569 23.39 temperature 10.0 10 > th dose independent rect. 23 6
570 23.39 temperature 30.0 10 < th dose independent rect. 23 6
571 23.39 humidity 50.0 10 > th dose independent rect. 23 6
574 23.39 atmosphere 995.0 10 > th dose independent rect. 23 6
580 23.39 temperature 10.0 10 > th dose independent rect. 5 18
582 23.39 atmosphere 1015.0 10 < th dose independent rect. 5 18
586 23.39 atmosphere 1015.0 90 < th dose dependent rect. 23 5
587 23.39 atmosphere 1015.0 10 < th dose dependent rect. 23 6
597 23.41 wind 9.0 10 < th dose dependent rect. 5 2
608 23.42 precipitation 0.1 10 < th dose independent rect. 5 2
610 23.42 radiation 10.0 10 < th dose independent rect. 5 3
617 23.42 precipitation 0.1 10 < th dose dependent rect. 5 2
628 23.43 radiation 40.0 90 < th dose dependent rect. 5 2
631 23.43 atmosphere 995.0 90 > th dose dependent rect. 4 19
641 23.45 precipitation 0.1 270 < th dose independent rect. 3 4
644 23.45 precipitation 0.1 270 < th dose dependent rect. 3 4
655 23.46 precipitation 0.1 10 < th dose independent rect. 5 18
661 23.46 precipitation 0.1 10 < th dose dependent rect. 5 18
666 23.47 temperature 10.0 10 > th dose independent rect. 5 2
668 23.47 temperature 30.0 10 < th dose independent rect. 5 2
669 23.47 humidity 50.0 10 > th dose independent rect. 5 2
672 23.47 atmosphere 995.0 10 > th dose independent rect. 5 2
673 23.47 atmosphere 1015.0 10 < th dose independent rect. 5 2
680 23.47 temperature 10.0 10 > th dose independent rect. 7 22
681 23.47 wind 9.0 270 < th dose dependent rect. 23 2
690 23.48 humidity 50.0 90 > th dose dependent rect. 5 2
707 23.50 humidity 50.0 270 > th dose dependent rect. 23 2
713 23.51 radiation 10.0 270 < th dose independent rect. 3 4
715 23.51 atmosphere 1015.0 270 < th dose dependent rect. 23 2
735 23.52 wind 7.0 270 < th dose independent rect. 21 5
738 23.52 atmosphere 1015.0 90 < th dose independent rect. 4 19
758 23.54 precipitation 0.1 270 < th dose independent rect. 21 5
764 23.54 precipitation 0.1 270 < th dose dependent rect. 21 5
779 23.56 wind 3.0 10 < th dose independent rect. 5 5
780 23.56 temperature 10.0 270 > th dose independent rect. 21 5
781 23.56 temperature 30.0 270 < th dose independent rect. 21 5
782 23.56 humidity 50.0 270 > th dose independent rect. 21 5
785 23.56 atmosphere 995.0 270 > th dose independent rect. 21 5
786 23.56 radiation 1.0 270 < th dose independent rect. 21 5
791 23.56 wind 1.0 90 > th dose independent rect. 23 6
793 23.56 temperature 10.0 270 > th dose independent rect. 2 19
797 23.56 radiation 1.0 270 < th dose dependent rect. 21 5
803 23.57 wind 7.0 90 < th dose dependent rect. 4 5
810 23.58 humidity 50.0 10 > th dose dependent rect. 23 6
824 23.59 wind 1.0 90 > th dose independent rect. 7 22
825 23.59 precipitation 0.1 90 < th dose independent rect. 7 22
833 23.59 precipitation 0.1 90 < th dose dependent rect. 7 22
839 23.61 humidity 90.0 30 < th dose independent rect. 5 2
885 23.63 temperature 25.0 10 > th dose independent rect. 5 2
916 23.64 radiation 40.0 270 < th dose dependent rect. 3 4
927 23.65 wind 9.0 10 < th dose independent rect. 5 18
970 23.68 temperature 20.0 10 > th dose independent rect. 14 15
978 23.69 radiation 20.0 10 < th dose dependent rect. 6 1