BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os05g0361200 Os05g0361200|AK073873
         (526 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G30390.2  | chr2:12951242-12953985 REVERSE LENGTH=523          721   0.0  
AT5G26030.1  | chr5:9096675-9098752 FORWARD LENGTH=467            533   e-151

>AT2G30390.2 | chr2:12951242-12953985 REVERSE LENGTH=523
          Length = 522

 Score =  721 bits (1861), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/461 (77%), Positives = 387/461 (83%), Gaps = 10/461 (2%)

Query: 73  LGWSSQPXXXXXXXXXXXXXXXEAVLTSQSDFTKLLVGNEKIGVLLLNLGGPETLDDVQP 132
           LG  S P                +V++     + ++  + KIGVLLLNLGGPETLDDVQP
Sbjct: 60  LGKHSLPLRAALVTSNPLNISSSSVISDAISSSSVITDDAKIGVLLLNLGGPETLDDVQP 119

Query: 133 FLFNLFADPDIIRLPRLFRFLQKPLAQFISVVRAPKSKEGYASIGGGSPLRQITDAQAEA 192
           FLFNLFADPDIIRLP +F+FLQKPLAQFISV RAPKSKEGYASIGGGSPLR ITDAQAE 
Sbjct: 120 FLFNLFADPDIIRLPPVFQFLQKPLAQFISVARAPKSKEGYASIGGGSPLRHITDAQAEE 179

Query: 193 LRKALCDKDIPAKVYVGMRYWHPFTEEAIEQIKRDGITKLVVLPLYPQFSISTSGSSLRL 252
           LRK L +K++PAKVYVGMRYWHPFTEEAIEQIKRDGITKLVVLPLYPQFSISTSGSSLRL
Sbjct: 180 LRKCLWEKNVPAKVYVGMRYWHPFTEEAIEQIKRDGITKLVVLPLYPQFSISTSGSSLRL 239

Query: 253 LEGIFREDEYLVNMQHTVIPSWYQREGYIKAMATLIEKELRTFSEPQK----------VM 302
           LE IFREDEYLVNMQHTVIPSWYQREGYIKAMA LI+ EL  F  P +          V+
Sbjct: 240 LERIFREDEYLVNMQHTVIPSWYQREGYIKAMANLIQSELGKFGSPNQTCFKPKYMLQVV 299

Query: 303 IFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRGITNSCTLAYQSRVGPVEWLRP 362
           IFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEEL+KR ITN+ TLAYQSRVGPVEWL+P
Sbjct: 300 IFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELDKRKITNAYTLAYQSRVGPVEWLKP 359

Query: 363 YTDETIIELGQKGVKSLLAVPISFVSEHIETLEEIDVEYKELALESGIKHWGRVPALGCE 422
           YT+E I ELG+KGV++LLAVPISFVSEHIETLEEIDVEYKELAL+SGIK+WGRVPALG E
Sbjct: 360 YTEEAITELGKKGVENLLAVPISFVSEHIETLEEIDVEYKELALKSGIKNWGRVPALGTE 419

Query: 423 PTFITDLADAVIESLPYVGAMAVSNLEARQPLVPLGSVEELLAAYDSKRDELPPPVTVWE 482
           P FI+DLADAV+ESLPYVGAMAVSNLEARQ LVPLGSVEELLA YDS+R ELP PVT+WE
Sbjct: 420 PMFISDLADAVVESLPYVGAMAVSNLEARQSLVPLGSVEELLATYDSQRRELPAPVTMWE 479

Query: 483 WGWTKSAETWNGRXXXXXXXXXXXXEVTTGEGFLHQWGILP 523
           WGWTKSAETWNGR            EVTTG+GFLHQWGILP
Sbjct: 480 WGWTKSAETWNGRAAMLAVLALLVLEVTTGKGFLHQWGILP 520



>AT5G26030.1 | chr5:9096675-9098752 FORWARD LENGTH=467
          Length = 466

 Score =  533 bits (1373), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 246/340 (72%), Positives = 301/340 (88%)

Query: 108 LVGNEKIGVLLLNLGGPETLDDVQPFLFNLFADPDIIRLPRLFRFLQKPLAQFISVVRAP 167
           +V  +KIGVLLLNLGGPETL+DVQPFL+NLFADPDIIRLPR F+FLQ  +A+FISVVRAP
Sbjct: 84  VVAEDKIGVLLLNLGGPETLNDVQPFLYNLFADPDIIRLPRPFQFLQGTIAKFISVVRAP 143

Query: 168 KSKEGYASIGGGSPLRQITDAQAEALRKALCDKDIPAKVYVGMRYWHPFTEEAIEQIKRD 227
           KSKEGYA+IGGGSPLR+ITD QA+A++ +L  K+I A VYVGMRYW+PFTEEA++QIK+D
Sbjct: 144 KSKEGYAAIGGGSPLRKITDEQADAIKMSLQAKNIAANVYVGMRYWYPFTEEAVQQIKKD 203

Query: 228 GITKLVVLPLYPQFSISTSGSSLRLLEGIFREDEYLVNMQHTVIPSWYQREGYIKAMATL 287
            IT+LVVLPLYPQ+SIST+GSS+R+L+ +FR+D YL  +   +I SWYQR GY+ +MA L
Sbjct: 204 KITRLVVLPLYPQYSISTTGSSIRVLQDLFRKDPYLAGVPVAIIKSWYQRRGYVNSMADL 263

Query: 288 IEKELRTFSEPQKVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRGITNSCT 347
           IEKEL+TFS+P++VMIFFSAHGVP++YVE AGDPY+ +MEEC+DLIMEEL+ RG+ N   
Sbjct: 264 IEKELQTFSDPKEVMIFFSAHGVPVSYVENAGDPYQKQMEECIDLIMEELKARGVLNDHK 323

Query: 348 LAYQSRVGPVEWLRPYTDETIIELGQKGVKSLLAVPISFVSEHIETLEEIDVEYKELALE 407
           LAYQSRVGPV+WL+PYTDE +++LG+ GVKSLLAVP+SFVSEHIETLEEID+EY+ELALE
Sbjct: 324 LAYQSRVGPVQWLKPYTDEVLVDLGKSGVKSLLAVPVSFVSEHIETLEEIDMEYRELALE 383

Query: 408 SGIKHWGRVPALGCEPTFITDLADAVIESLPYVGAMAVSN 447
           SG+++WGRVPALG  P+FITDLADAVIESLP   AM+  N
Sbjct: 384 SGVENWGRVPALGLTPSFITDLADAVIESLPSAEAMSNPN 423



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.318    0.135    0.410 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 10,885,261
Number of extensions: 433636
Number of successful extensions: 1041
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 1039
Number of HSP's successfully gapped: 2
Length of query: 526
Length of database: 11,106,569
Length adjustment: 103
Effective length of query: 423
Effective length of database: 8,282,721
Effective search space: 3503590983
Effective search space used: 3503590983
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 114 (48.5 bits)