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Os05g0316100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Zinc/iron permease family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.78 (0.0133) R2 : 0.039
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.12 (0.0279) R2dN8 : 0.0504 R2N8 : 0.039
σ : 0.25
deviance : 28.61
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
20.17 0.211 9.77 0.241 0.276 0.197 0.0213 -1.02 0.181 9.96 91.03 170 -- --
21.92 0.218 9.76 0.21 0.278 0.154 0.0968 -- 0.173 10.2 90.01 200 -- --
20.18 0.209 9.77 0.242 0.276 0.197 -- -1.02 0.181 9.95 91.02 170 -- --
21.96 0.218 9.76 0.219 0.273 0.14 -- -- 0.168 10.1 90 200 -- --
24.19 0.229 9.77 0.247 -- 0.274 -- -0.819 0.189 -- 88.78 397 -- --
22.35 0.222 9.76 0.232 0.289 -- 0.0263 -- 0.144 9.27 -- -- -- --
22.35 0.221 9.76 0.233 0.289 -- -- -- 0.144 9.24 -- -- -- --
24.91 0.232 9.76 0.216 -- 0.273 -- -- 0.179 -- 82.89 630 -- --
23.2 0.224 9.76 -- 0.27 0.157 -- -- 0.148 10.1 89.96 199 -- --
27.2 0.244 9.77 0.232 -- -- -- -- 0.146 -- -- -- -- --
23.78 0.228 9.77 -- 0.289 -- -- -- 0.119 9.18 -- -- -- --
26 0.237 9.77 -- -- 0.297 -- -- 0.162 -- 83 656 -- --
28.61 0.25 9.78 -- -- -- -- -- 0.12 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 20.04 atmosphere 1010.0 10 < th dose dependent rect. 20 10
3 20.05 humidity 90.0 270 > th dose dependent rect. 9 21
5 20.06 humidity 90.0 270 > th dose dependent rect. 19 11
7 20.07 radiation 30.0 1440 < th dose independent rect. 14 17
8 20.07 humidity 90.0 270 > th dose dependent rect. 20 9
12 20.08 radiation 30.0 1440 < th dose independent rect. 14 3
14 20.08 radiation 30.0 1440 < th dose independent rect. 14 13
18 20.08 humidity 90.0 270 > th dose dependent sin 13 NA
23 20.09 radiation 30.0 1440 < th dose independent rect. 14 11
25 20.09 humidity 90.0 720 > th dose dependent rect. 20 1
51 20.14 wind 1.0 720 < th dose independent rect. 23 1
52 20.14 humidity 90.0 14400 > th dose independent rect. 6 2
54 20.16 humidity 90.0 14400 < th dose independent rect. 6 2
55 20.16 radiation 30.0 1440 > th dose independent rect. 14 3
71 20.16 humidity 90.0 14400 > th dose dependent rect. 6 4
74 20.17 precipitation 0.1 4320 < th dose independent rect. 4 6
76 20.17 precipitation 0.1 4320 < th dose dependent rect. 4 6
77 20.18 humidity 70.0 1440 > th dose independent rect. 11 2
79 20.18 precipitation 0.1 4320 > th dose independent rect. 4 6
84 20.19 wind 1.0 720 > th dose independent rect. 9 6
89 20.20 precipitation 0.1 4320 > th dose dependent rect. 4 6
92 20.20 humidity 90.0 270 > th dose dependent rect. 20 14
102 20.22 humidity 90.0 4320 > th dose dependent rect. 6 8
106 20.23 humidity 70.0 1440 < th dose independent rect. 11 2
108 20.23 humidity 90.0 1440 > th dose dependent rect. 6 4
123 20.24 humidity 70.0 1440 < th dose independent rect. 10 5
138 20.24 humidity 90.0 270 > th dose dependent rect. 20 21
139 20.25 precipitation 0.1 4320 > th dose independent rect. 6 2
142 20.25 precipitation 0.1 4320 > th dose dependent rect. 6 2
151 20.25 humidity 90.0 270 > th dose dependent rect. 20 18
157 20.25 humidity 90.0 270 > th dose dependent rect. 13 21
180 20.26 humidity 90.0 30 > th dose dependent rect. 21 21
191 20.27 precipitation 0.1 4320 > th dose independent rect. 3 13
192 20.27 precipitation 0.1 4320 < th dose independent rect. 3 13
196 20.27 precipitation 0.1 4320 < th dose dependent rect. 3 13
223 20.29 temperature 25.0 270 < th dose independent rect. 18 1
228 20.29 precipitation 0.1 4320 > th dose independent rect. 3 11
248 20.30 precipitation 0.1 4320 < th dose independent rect. 3 11
252 20.30 precipitation 0.1 4320 < th dose dependent rect. 3 11
260 20.31 wind 1.0 1440 > th dose independent rect. 23 1
269 20.31 humidity 90.0 270 > th dose dependent no NA NA
291 20.32 humidity 70.0 1440 < th dose independent rect. 10 10
308 20.32 humidity 90.0 30 > th dose dependent rect. 24 22
309 20.32 humidity 90.0 30 > th dose dependent rect. 3 23
321 20.33 precipitation 0.1 4320 > th dose dependent rect. 3 13
323 20.33 precipitation 0.1 4320 > th dose dependent rect. 24 16
336 20.34 precipitation 0.1 4320 > th dose independent rect. 24 17
337 20.34 radiation 1.0 30 < th dose independent rect. 22 21
339 20.34 humidity 70.0 1440 < th dose independent rect. 18 22
366 20.35 precipitation 0.1 4320 < th dose independent rect. 1 16
368 20.35 humidity 90.0 30 > th dose dependent sin 7 NA
376 20.35 precipitation 0.1 4320 < th dose dependent rect. 1 16
377 20.35 humidity 90.0 30 > th dose dependent rect. 21 17
406 20.36 radiation 1.0 4320 < th dose dependent rect. 7 1
408 20.36 humidity 90.0 720 > th dose dependent rect. 20 5
415 20.36 humidity 90.0 30 > th dose dependent rect. 21 15
428 20.37 humidity 70.0 1440 > th dose independent rect. 19 22
439 20.38 humidity 70.0 1440 < th dose independent sin 22 NA
444 20.38 humidity 90.0 270 > th dose independent rect. 20 10
460 20.38 atmosphere 1010.0 90 < th dose dependent rect. 23 7
476 20.39 humidity 90.0 720 > th dose independent rect. 20 1
480 20.39 humidity 60.0 14400 > th dose independent rect. 23 9
486 20.39 wind 5.0 30 < th dose independent rect. 23 20
490 20.39 atmosphere 1010.0 10 < th dose dependent sin 8 NA
501 20.39 humidity 90.0 30 > th dose dependent rect. 21 13
513 20.39 radiation 1.0 30 < th dose dependent rect. 22 21
517 20.40 precipitation 0.1 4320 > th dose independent sin 4 NA
518 20.40 temperature 25.0 720 < th dose independent rect. 7 1
524 20.40 humidity 90.0 14400 < th dose independent rect. 6 9
547 20.40 humidity 90.0 30 > th dose dependent no NA NA
564 20.40 humidity 90.0 30 > th dose dependent rect. 17 21
568 20.40 humidity 90.0 30 > th dose dependent rect. 9 23
569 20.40 humidity 90.0 30 > th dose dependent rect. 11 23
570 20.40 humidity 90.0 30 > th dose dependent rect. 13 23
577 20.41 precipitation 0.1 4320 < th dose independent sin 4 NA
591 20.41 humidity 70.0 1440 > th dose independent rect. 10 21
594 20.41 precipitation 0.1 4320 < th dose dependent sin 4 NA
597 20.41 radiation 20.0 1440 > th dose dependent rect. 14 3
624 20.41 humidity 90.0 30 > th dose dependent rect. 24 18
629 20.41 humidity 90.0 30 > th dose dependent rect. 7 23
635 20.42 radiation 1.0 4320 < th dose independent rect. 7 1
640 20.42 humidity 70.0 1440 > th dose independent rect. 10 10
664 20.42 humidity 70.0 1440 > th dose independent rect. 24 17
692 20.42 radiation 40.0 14400 < th dose dependent rect. 23 6
708 20.42 humidity 90.0 30 > th dose dependent rect. 17 19
727 20.43 humidity 70.0 1440 > th dose independent sin 0 NA
729 20.43 radiation 1.0 4320 > th dose independent rect. 7 1
761 20.43 temperature 30.0 90 < th dose dependent rect. 19 2
785 20.44 humidity 70.0 1440 < th dose independent no NA NA
786 20.44 precipitation 0.1 14400 < th dose independent rect. 13 1
787 20.44 humidity 80.0 14400 > th dose independent rect. 9 2
802 20.44 humidity 90.0 270 > th dose independent rect. 20 14
878 20.44 precipitation 0.1 4320 > th dose dependent sin 5 NA
881 20.44 precipitation 0.1 14400 > th dose dependent rect. 13 1
882 20.44 precipitation 0.1 14400 < th dose dependent rect. 13 1
883 20.44 temperature 30.0 10 < th dose dependent rect. 19 3
908 20.45 radiation 20.0 4320 > th dose independent rect. 7 1
909 20.45 precipitation 0.1 14400 > th dose independent rect. 13 1
938 20.45 temperature 10.0 30 > th dose dependent rect. 3 14
942 20.45 humidity 90.0 30 > th dose dependent rect. 17 17
956 20.45 humidity 50.0 30 > th dose dependent rect. 23 20
964 20.45 humidity 90.0 30 > th dose dependent rect. 5 23
967 20.46 humidity 90.0 270 > th dose independent sin 11 NA
995 20.46 precipitation 0.1 4320 > th dose dependent rect. 24 11