Os05g0307400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Regulatory associated protein of mTOR (Raptor) (P150 target of rapamycin (TOR)-scaffold protein).
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Os05g0307400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Regulatory associated protein of mTOR (Raptor) (P150 target of rapamycin (TOR)-scaffold protein).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 97.15 | 0.463 | 5.94 | -0.0874 | 0.389 | 1.47 | -0.315 | 1.41 | -0.191 | 13 | 20.56 | 10 | -- | -- |
| 98.4 | 0.462 | 5.96 | -0.335 | 0.385 | 1.55 | 0.0152 | -- | -0.273 | 12.7 | 21.1 | 15 | -- | -- |
| 97.52 | 0.46 | 5.94 | -0.113 | 0.376 | 1.49 | -- | 1.32 | -0.199 | 12.8 | 20.6 | 10 | -- | -- |
| 98.24 | 0.462 | 5.97 | -0.329 | 0.379 | 1.55 | -- | -- | -0.264 | 12.7 | 21.22 | 14 | -- | -- |
| 104.05 | 0.475 | 5.96 | -0.227 | -- | 1.85 | -- | 1.16 | -0.256 | -- | 21.02 | 10 | -- | -- |
| 134.18 | 0.543 | 5.91 | -0.0247 | 0.945 | -- | 0.425 | -- | -0.000404 | 13.9 | -- | -- | -- | -- |
| 134.88 | 0.544 | 5.91 | -0.0116 | 0.945 | -- | -- | -- | 0.002 | 13.9 | -- | -- | -- | -- |
| 104.36 | 0.476 | 5.99 | -0.412 | -- | 1.88 | -- | -- | -0.321 | -- | 21.1 | 10 | -- | -- |
| 100.87 | 0.468 | 5.95 | -- | 0.422 | 1.43 | -- | -- | -0.202 | 13.1 | 21.6 | 10 | -- | -- |
| 188.88 | 0.642 | 5.92 | -0.0506 | -- | -- | -- | -- | -0.0198 | -- | -- | -- | -- | -- |
| 134.88 | 0.543 | 5.91 | -- | 0.946 | -- | -- | -- | 0.0033 | 13.9 | -- | -- | -- | -- |
| 108.66 | 0.485 | 5.97 | -- | -- | 1.8 | -- | -- | -0.261 | -- | 21.32 | 10 | -- | -- |
| 188.95 | 0.642 | 5.92 | -- | -- | -- | -- | -- | -0.0142 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 92.44 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 21 |
| 4 | 93.41 | temperature | 15 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 16 | 94.89 | temperature | 10 | 270 | > th | dose dependent | rect. | 3 | 22 |
| 27 | 96.04 | temperature | 20 | 90 | > th | dose dependent | rect. | 5 | 20 |
| 43 | 96.91 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 17 |
| 46 | 96.94 | temperature | 25 | 720 | < th | dose dependent | sin | 1 | NA |
| 57 | 97.27 | temperature | 20 | 10 | > th | dose dependent | no | NA | NA |
| 73 | 97.67 | temperature | 20 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 89 | 97.95 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 18 |
| 91 | 98.05 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 95 | 98.08 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 110 | 98.24 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 112 | 98.29 | temperature | 25 | 270 | > th | dose independent | rect. | 3 | 19 |
| 119 | 98.34 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 146 | 98.70 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 155 | 98.76 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 188 | 99.08 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 196 | 99.13 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 203 | 99.19 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 212 | 99.22 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 220 | 99.30 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 223 | 99.31 | temperature | 30 | 720 | < th | dose dependent | sin | 5 | NA |
| 225 | 99.33 | temperature | 30 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 226 | 99.36 | temperature | 30 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 241 | 99.45 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 262 | 99.60 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 23 |
| 265 | 99.66 | temperature | 20 | 720 | > th | dose dependent | sin | 6 | NA |
| 274 | 99.71 | temperature | 10 | 720 | > th | dose dependent | sin | 6 | NA |
| 281 | 99.79 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 299 | 99.89 | temperature | 30 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 364 | 100.39 | temperature | 30 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 390 | 100.53 | temperature | 25 | 270 | < th | dose independent | rect. | 22 | 22 |
| 434 | 100.75 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 23 |
| 469 | 100.92 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 23 |
| 474 | 100.93 | temperature | 25 | 720 | < th | dose dependent | rect. | 11 | 23 |
| 560 | 101.37 | temperature | 20 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 572 | 101.49 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 2 |
| 584 | 101.54 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 6 |
| 701 | 101.96 | temperature | 25 | 1440 | < th | dose dependent | sin | 16 | NA |
| 754 | 102.15 | temperature | 25 | 1440 | < th | dose dependent | rect. | 13 | 16 |
| 775 | 102.20 | temperature | 10 | 90 | > th | dose dependent | sin | 1 | NA |
| 818 | 102.31 | temperature | 10 | 10 | > th | dose dependent | sin | 0 | NA |
| 853 | 102.43 | temperature | 25 | 270 | < th | dose independent | sin | 0 | NA |