Os05g0301600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein phosphatase inhibitor 2 (IPP-2) family protein.
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Os05g0301600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein phosphatase inhibitor 2 (IPP-2) family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 31.08 | 0.262 | 9.51 | 0.451 | 0.276 | 1.16 | -0.433 | 0.785 | 0.00227 | 5.22 | 27.14 | 141 | -- | -- |
| 31.85 | 0.263 | 9.5 | 0.578 | 0.277 | 1.12 | -0.237 | -- | 0.0264 | 5.17 | 27.55 | 132 | -- | -- |
| 31.47 | 0.261 | 9.51 | 0.486 | 0.281 | 1.14 | -- | 0.587 | 0.00765 | 5.03 | 27.01 | 142 | -- | -- |
| 31.94 | 0.263 | 9.49 | 0.579 | 0.278 | 1.11 | -- | -- | 0.0323 | 5.03 | 27.38 | 141 | -- | -- |
| 34.26 | 0.273 | 9.5 | 0.546 | -- | 1.31 | -- | 0.535 | 0.0491 | -- | 28.28 | 147 | -- | -- |
| 49.09 | 0.328 | 9.55 | 0.297 | 0.568 | -- | 0.00213 | -- | -0.209 | 4.07 | -- | -- | -- | -- |
| 49.09 | 0.328 | 9.55 | 0.297 | 0.568 | -- | -- | -- | -0.209 | 4.07 | -- | -- | -- | -- |
| 34.68 | 0.274 | 9.49 | 0.63 | -- | 1.29 | -- | -- | 0.0635 | -- | 28.75 | 146 | -- | -- |
| 39.78 | 0.294 | 9.52 | -- | 0.362 | 0.858 | -- | -- | -0.0792 | 4.57 | 26.98 | 145 | -- | -- |
| 66.63 | 0.381 | 9.55 | 0.32 | -- | -- | -- | -- | -0.194 | -- | -- | -- | -- | -- |
| 51.41 | 0.335 | 9.55 | -- | 0.573 | -- | -- | -- | -0.242 | 4.06 | -- | -- | -- | -- |
| 44.2 | 0.31 | 9.52 | -- | -- | 1.1 | -- | -- | -0.0489 | -- | 29.7 | 126 | -- | -- |
| 69.32 | 0.389 | 9.56 | -- | -- | -- | -- | -- | -0.229 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 28.54 | temperature | 25 | 90 | < th | dose dependent | rect. | 1 | 22 |
| 3 | 29.44 | temperature | 10 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 8 | 29.90 | temperature | 25 | 90 | < th | dose dependent | rect. | 3 | 20 |
| 13 | 30.46 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 21 |
| 15 | 30.49 | temperature | 15 | 90 | > th | dose dependent | rect. | 6 | 23 |
| 18 | 30.60 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 22 | 30.83 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 31 | 31.07 | temperature | 15 | 270 | > th | dose dependent | rect. | 20 | 17 |
| 32 | 31.07 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 22 |
| 37 | 31.21 | temperature | 15 | 10 | > th | dose dependent | rect. | 9 | 20 |
| 51 | 31.44 | temperature | 20 | 10 | > th | dose dependent | rect. | 22 | 18 |
| 60 | 31.48 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 69 | 31.57 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 74 | 31.60 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 20 |
| 87 | 31.73 | temperature | 10 | 90 | > th | dose dependent | sin | 6 | NA |
| 110 | 31.86 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 112 | 31.86 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 115 | 31.88 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 116 | 31.89 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 125 | 31.95 | temperature | 15 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 129 | 31.98 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 166 | 32.26 | temperature | 10 | 270 | > th | dose dependent | sin | 8 | NA |
| 170 | 32.28 | temperature | 30 | 90 | < th | dose dependent | sin | 6 | NA |
| 181 | 32.36 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 193 | 32.42 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 17 |
| 216 | 32.54 | temperature | 30 | 270 | < th | dose dependent | sin | 8 | NA |
| 220 | 32.55 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 288 | 32.80 | temperature | 30 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 307 | 32.89 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 15 |
| 402 | 33.25 | temperature | 25 | 10 | < th | dose dependent | sin | 23 | NA |
| 434 | 33.36 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 441 | 33.39 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 13 |
| 609 | 33.86 | temperature | 15 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 789 | 34.33 | temperature | 15 | 10 | > th | dose dependent | rect. | 9 | 16 |
| 904 | 34.59 | temperature | 20 | 10 | > th | dose dependent | rect. | 2 | 23 |
| 943 | 34.71 | temperature | 25 | 270 | < th | dose independent | rect. | 1 | 20 |
| 955 | 34.73 | temperature | 25 | 270 | < th | dose independent | rect. | 23 | 22 |