Os05g0299200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0299200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25.66 | 0.238 | 9.1 | -0.11 | 0.372 | 0.715 | -0.147 | -0.448 | -0.322 | 4.49 | 19 | 2461 | -- | -- |
| 25.79 | 0.237 | 9.11 | -0.0876 | 0.345 | 0.917 | -0.0323 | -- | -0.316 | 4.7 | 18.8 | 3491 | -- | -- |
| 25.72 | 0.236 | 9.1 | -0.113 | 0.371 | 0.717 | -- | -0.425 | -0.323 | 4.49 | 18.99 | 2460 | -- | -- |
| 25.79 | 0.237 | 9.11 | -0.0924 | 0.345 | 0.921 | -- | -- | -0.314 | 4.72 | 18.8 | 3464 | -- | -- |
| 32.03 | 0.264 | 9.1 | -0.0484 | -- | 0.802 | -- | -0.351 | -0.297 | -- | 18.96 | 3438 | -- | -- |
| 37.2 | 0.286 | 9.15 | -0.556 | 0.341 | -- | -0.0207 | -- | -0.497 | 4.94 | -- | -- | -- | -- |
| 37.2 | 0.286 | 9.15 | -0.556 | 0.341 | -- | -- | -- | -0.497 | 4.93 | -- | -- | -- | -- |
| 32.17 | 0.264 | 9.11 | -0.0933 | -- | 0.88 | -- | -- | -0.308 | -- | 18.9 | 3353 | -- | -- |
| 25.95 | 0.237 | 9.1 | -- | 0.358 | 0.951 | -- | -- | -0.296 | 4.65 | 18.72 | 3535 | -- | -- |
| 43.32 | 0.308 | 9.15 | -0.543 | -- | -- | -- | -- | -0.488 | -- | -- | -- | -- | -- |
| 45.33 | 0.315 | 9.13 | -- | 0.331 | -- | -- | -- | -0.435 | 4.99 | -- | -- | -- | -- |
| 32.27 | 0.265 | 9.1 | -- | -- | 0.956 | -- | -- | -0.307 | -- | 18.4 | 7796 | -- | -- |
| 51.1 | 0.334 | 9.14 | -- | -- | -- | -- | -- | -0.428 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 23.97 | humidity | 80 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 2 | 24.25 | humidity | 80 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 3 | 24.34 | humidity | 60 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 5 | 24.57 | humidity | 60 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 8 | 24.71 | humidity | 60 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 9 | 24.72 | humidity | 80 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 10 | 24.74 | humidity | 60 | 43200 | < th | dose dependent | rect. | 4 | 10 |
| 12 | 24.75 | humidity | 70 | 43200 | > th | dose independent | rect. | 4 | 7 |
| 16 | 24.76 | humidity | 50 | 43200 | > th | dose independent | sin | 4 | NA |
| 18 | 24.76 | humidity | 50 | 43200 | > th | dose independent | rect. | 6 | 6 |
| 19 | 24.76 | humidity | 50 | 43200 | < th | dose independent | rect. | 6 | 6 |
| 21 | 24.76 | humidity | 50 | 43200 | > th | dose independent | rect. | 20 | 21 |
| 26 | 24.77 | humidity | 50 | 43200 | > th | dose independent | rect. | 7 | 4 |
| 31 | 24.77 | humidity | 50 | 43200 | > th | dose independent | rect. | 4 | 12 |
| 53 | 24.78 | humidity | 50 | 43200 | < th | dose independent | sin | 4 | NA |
| 60 | 24.78 | humidity | 50 | 43200 | < th | dose independent | rect. | 4 | 13 |
| 66 | 24.78 | humidity | 50 | 43200 | < th | dose independent | rect. | 20 | 21 |
| 79 | 24.79 | humidity | 50 | 43200 | < th | dose independent | rect. | 4 | 11 |
| 90 | 24.79 | humidity | 50 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 129 | 24.81 | humidity | 50 | 43200 | > th | dose independent | rect. | 13 | 21 |
| 137 | 24.81 | humidity | 60 | 43200 | < th | dose dependent | sin | 5 | NA |
| 248 | 24.84 | humidity | 50 | 43200 | > th | dose independent | rect. | 2 | 22 |
| 267 | 24.84 | humidity | 50 | 43200 | < th | dose dependent | rect. | 16 | 21 |
| 268 | 24.85 | humidity | 50 | 43200 | > th | dose independent | no | NA | NA |
| 304 | 24.85 | humidity | 50 | 43200 | > th | dose independent | rect. | 16 | 23 |
| 309 | 24.85 | humidity | 50 | 43200 | < th | dose independent | rect. | 16 | 23 |
| 372 | 24.87 | humidity | 70 | 43200 | < th | dose independent | rect. | 4 | 7 |
| 400 | 24.87 | humidity | 50 | 43200 | < th | dose independent | rect. | 13 | 23 |
| 407 | 24.88 | humidity | 50 | 43200 | < th | dose independent | no | NA | NA |
| 455 | 24.88 | humidity | 50 | 43200 | < th | dose independent | rect. | 11 | 23 |
| 477 | 24.89 | humidity | 50 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 791 | 24.99 | humidity | 50 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 943 | 25.03 | humidity | 50 | 43200 | < th | dose dependent | rect. | 11 | 23 |
| 960 | 25.04 | humidity | 50 | 43200 | < th | dose dependent | no | NA | NA |