Os05g0255600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Thioredoxin domain 2 containing protein.
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Os05g0255600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Thioredoxin domain 2 containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 29.41 | 0.255 | 11.1 | 0.114 | 0.522 | 0.568 | -0.0933 | 0.399 | 0.0813 | 4.76 | 78.99 | 1321 | -- | -- |
| 29.49 | 0.253 | 11.1 | 0.0881 | 0.515 | 0.589 | -0.0323 | -- | 0.0746 | 4.96 | 78.88 | 1262 | -- | -- |
| 29.33 | 0.252 | 11.1 | 0.116 | 0.517 | 0.555 | -- | 0.429 | 0.0822 | 5.03 | 78.89 | 1242 | -- | -- |
| 29.49 | 0.253 | 11.1 | 0.0806 | 0.516 | 0.583 | -- | -- | 0.0744 | 4.97 | 78.68 | 1262 | -- | -- |
| 42.86 | 0.305 | 11.1 | 0.124 | -- | 0.738 | -- | 0.414 | 0.0863 | -- | 78.7 | 1262 | -- | -- |
| 33.96 | 0.273 | 11.1 | 0.111 | 0.571 | -- | 0.000695 | -- | 0.103 | 4.57 | -- | -- | -- | -- |
| 33.96 | 0.273 | 11.1 | 0.111 | 0.571 | -- | -- | -- | 0.103 | 4.57 | -- | -- | -- | -- |
| 43.02 | 0.305 | 11.1 | 0.0895 | -- | 0.762 | -- | -- | 0.0786 | -- | 78.36 | 1262 | -- | -- |
| 29.67 | 0.254 | 11.1 | -- | 0.516 | 0.59 | -- | -- | 0.0652 | 4.98 | 78.46 | 1259 | -- | -- |
| 51.31 | 0.335 | 11.1 | 0.133 | -- | -- | -- | -- | 0.118 | -- | -- | -- | -- | -- |
| 34.28 | 0.274 | 11.1 | -- | 0.573 | -- | -- | -- | 0.0903 | 4.57 | -- | -- | -- | -- |
| 43.23 | 0.306 | 11.1 | -- | -- | 0.771 | -- | -- | 0.0683 | -- | 78.45 | 1262 | -- | -- |
| 51.78 | 0.336 | 11.1 | -- | -- | -- | -- | -- | 0.103 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 25.70 | humidity | 80 | 1440 | < th | dose independent | rect. | 2 | 6 |
| 2 | 25.74 | humidity | 80 | 1440 | < th | dose independent | rect. | 6 | 1 |
| 5 | 25.86 | humidity | 80 | 1440 | < th | dose dependent | rect. | 6 | 1 |
| 6 | 25.95 | humidity | 80 | 1440 | > th | dose independent | rect. | 2 | 6 |
| 10 | 26.19 | humidity | 80 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 45 | 27.39 | humidity | 80 | 1440 | < th | dose dependent | rect. | 24 | 8 |
| 48 | 27.44 | temperature | 20 | 90 | < th | dose independent | rect. | 8 | 1 |
| 62 | 27.56 | humidity | 80 | 720 | < th | dose independent | rect. | 19 | 13 |
| 66 | 27.63 | humidity | 80 | 720 | < th | dose independent | sin | 10 | NA |
| 125 | 28.15 | humidity | 80 | 720 | > th | dose independent | rect. | 17 | 15 |
| 135 | 28.20 | humidity | 80 | 1440 | > th | dose independent | sin | 8 | NA |
| 138 | 28.22 | humidity | 80 | 720 | > th | dose independent | sin | 10 | NA |
| 175 | 28.44 | temperature | 25 | 10 | < th | dose dependent | rect. | 8 | 2 |
| 219 | 28.61 | humidity | 90 | 720 | < th | dose dependent | sin | 10 | NA |
| 348 | 28.91 | humidity | 70 | 1440 | > th | dose dependent | rect. | 5 | 2 |
| 420 | 29.07 | humidity | 70 | 1440 | > th | dose dependent | rect. | 4 | 4 |
| 524 | 29.20 | humidity | 50 | 720 | > th | dose dependent | rect. | 17 | 16 |
| 559 | 29.26 | humidity | 70 | 720 | > th | dose dependent | rect. | 17 | 15 |
| 587 | 29.31 | humidity | 50 | 720 | > th | dose dependent | sin | 11 | NA |
| 648 | 29.39 | humidity | 50 | 1440 | > th | dose dependent | rect. | 21 | 11 |
| 777 | 29.53 | temperature | 20 | 270 | < th | dose independent | rect. | 6 | 13 |
| 781 | 29.53 | humidity | 70 | 1440 | > th | dose dependent | sin | 9 | NA |
| 929 | 29.67 | temperature | 20 | 270 | < th | dose independent | rect. | 6 | 2 |
| 957 | 29.69 | temperature | 20 | 270 | < th | dose independent | rect. | 6 | 10 |
| 965 | 29.70 | temperature | 20 | 270 | < th | dose independent | rect. | 6 | 8 |