Os05g0200700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os05g0200700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 325.15 | 0.847 | 5.85 | 0.259 | 3.71 | 2.11 | 0.687 | -0.806 | 0.444 | 22.2 | 2.678 | 20 | 20.9 | -- |
| 325.25 | 0.84 | 5.85 | 0.261 | 3.72 | 2.14 | 0.544 | -- | 0.442 | 22.3 | 2.77 | 16 | 20.5 | -- |
| 326.29 | 0.841 | 5.85 | 0.23 | 3.73 | 2.16 | -- | -0.628 | 0.436 | 22.3 | 2.756 | 18 | 20.5 | -- |
| 326.44 | 0.841 | 5.85 | 0.242 | 3.73 | 2.13 | -- | -- | 0.436 | 22.3 | 2.697 | 16 | 20.5 | -- |
| 417.58 | 0.952 | 5.73 | 0.305 | -- | 3.78 | -- | 0.905 | 0.484 | -- | 17.07 | 4 | 6.76 | -- |
| 427.11 | 0.969 | 5.85 | 0.225 | 4.06 | -- | 0.534 | -- | 0.38 | 23.2 | -- | -- | -- | -- |
| 428.33 | 0.969 | 5.85 | 0.203 | 4.06 | -- | -- | -- | 0.378 | 23.2 | -- | -- | -- | -- |
| 411.09 | 0.944 | 5.75 | 0.221 | -- | 3.92 | -- | -- | 0.425 | -- | 39.35 | 4 | 6.85 | -- |
| 327.95 | 0.843 | 5.85 | -- | 3.73 | 2.15 | -- | -- | 0.415 | 22.3 | 2.775 | 16 | 20.5 | -- |
| 1459.4 | 1.79 | 5.76 | 0.303 | -- | -- | -- | -- | 0.415 | -- | -- | -- | -- | -- |
| 429.41 | 0.969 | 5.86 | -- | 4.06 | -- | -- | -- | 0.355 | 23.2 | -- | -- | -- | -- |
| 412.37 | 0.946 | 5.76 | -- | -- | 3.92 | -- | -- | 0.4 | -- | 39.69 | 4 | 6.84 | -- |
| 1461.82 | 1.78 | 5.76 | -- | -- | -- | -- | -- | 0.381 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 319.43 | radiation | 40.0 | 30 | < th | dose dependent | rect. | 14 | 15 |
| 9 | 327.94 | radiation | 20.0 | 30 | < th | dose independent | rect. | 14 | 15 |
| 11 | 329.23 | radiation | 1.0 | 30 | < th | dose dependent | sin | 3 | NA |
| 12 | 329.28 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 15 | 14 |
| 17 | 330.70 | radiation | 20.0 | 30 | < th | dose independent | rect. | 12 | 17 |
| 19 | 331.33 | radiation | 1.0 | 30 | > th | dose independent | rect. | 5 | 10 |
| 30 | 331.34 | radiation | 1.0 | 10 | < th | dose independent | sin | 2 | NA |
| 35 | 332.51 | radiation | 1.0 | 10 | > th | dose independent | sin | 2 | NA |
| 86 | 336.07 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 5 | 10 |
| 87 | 336.07 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 5 | 10 |
| 88 | 336.21 | temperature | 10.0 | 30 | > th | dose independent | rect. | 5 | 10 |
| 90 | 336.21 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 5 | 10 |
| 91 | 336.21 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 5 | 10 |
| 92 | 336.21 | temperature | 10.0 | 30 | > th | dose independent | rect. | 15 | 14 |
| 96 | 337.53 | wind | 9.0 | 30 | < th | dose independent | rect. | 15 | 14 |
| 99 | 338.00 | wind | 9.0 | 30 | < th | dose independent | rect. | 5 | 10 |
| 111 | 339.62 | radiation | 1.0 | 30 | < th | dose independent | rect. | 1 | 18 |
| 112 | 339.76 | humidity | 80.0 | 30 | > th | dose dependent | rect. | 1 | 4 |
| 123 | 341.03 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 15 | 14 |
| 124 | 341.03 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 15 | 14 |
| 129 | 341.46 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 15 | 14 |
| 130 | 341.53 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 17 |
| 145 | 342.93 | temperature | 20.0 | 30 | > th | dose independent | rect. | 3 | 2 |
| 165 | 344.12 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 3 | 1 |
| 186 | 345.72 | wind | 9.0 | 30 | < th | dose dependent | rect. | 15 | 14 |
| 190 | 345.97 | wind | 3.0 | 30 | < th | dose dependent | rect. | 3 | 2 |
| 191 | 346.15 | humidity | 90.0 | 30 | > th | dose independent | rect. | 3 | 2 |
| 199 | 346.55 | humidity | 80.0 | 30 | > th | dose independent | rect. | 1 | 4 |
| 235 | 348.63 | radiation | 1.0 | 10 | < th | dose independent | rect. | 2 | 12 |
| 250 | 348.91 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 1 | 4 |
| 251 | 348.94 | wind | 9.0 | 30 | < th | dose dependent | rect. | 5 | 10 |
| 252 | 348.99 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 3 | 11 |
| 268 | 349.31 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 3 |
| 292 | 350.13 | radiation | 1.0 | 10 | < th | dose independent | rect. | 2 | 4 |
| 301 | 350.23 | humidity | 50.0 | 30 | > th | dose independent | rect. | 15 | 14 |
| 311 | 350.30 | wind | 3.0 | 30 | < th | dose dependent | rect. | 1 | 4 |
| 321 | 350.58 | radiation | 20.0 | 30 | < th | dose dependent | rect. | 8 | 21 |
| 328 | 350.78 | radiation | 1.0 | 10 | < th | dose independent | rect. | 2 | 6 |
| 359 | 351.46 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 4 |
| 369 | 351.66 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 6 |
| 405 | 352.18 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 2 |
| 406 | 352.18 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 2 |
| 408 | 352.18 | temperature | 30.0 | 30 | < th | dose independent | rect. | 3 | 2 |
| 409 | 352.18 | humidity | 50.0 | 30 | > th | dose independent | rect. | 3 | 2 |
| 412 | 352.18 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 3 | 2 |
| 413 | 352.18 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 3 | 2 |
| 420 | 352.18 | temperature | 10.0 | 30 | > th | dose independent | rect. | 5 | 22 |
| 477 | 353.07 | wind | 9.0 | 30 | < th | dose independent | rect. | 5 | 22 |
| 478 | 353.11 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 2 |
| 480 | 353.11 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 2 |
| 504 | 353.51 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 5 | 22 |
| 505 | 353.51 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 5 | 22 |
| 515 | 353.68 | radiation | 10.0 | 30 | < th | dose independent | rect. | 10 | 19 |
| 552 | 354.47 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 6 | 23 |
| 623 | 355.08 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 15 | 14 |
| 689 | 355.66 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 738 | 356.01 | radiation | 1.0 | 10 | < th | dose independent | rect. | 21 | 23 |
| 750 | 356.24 | humidity | 50.0 | 30 | > th | dose independent | rect. | 5 | 10 |
| 895 | 359.23 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 11 |
| 898 | 359.23 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 16 | 13 |
| 956 | 360.13 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 10 | 22 |
| 963 | 360.40 | wind | 1.0 | 90 | > th | dose independent | rect. | 3 | 1 |
| 966 | 360.51 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 12 | 20 |
| 995 | 361.03 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 15 | 23 |