Os05g0187600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase A1, pepsin family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os05g0187600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Peptidase A1, pepsin family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 172.64 | 0.617 | 3.41 | 0.509 | 0.475 | -0.646 | 0.119 | -0.255 | -0.173 | 13 | 20.4 | 424 | -- | -- |
| 172.84 | 0.612 | 3.41 | 0.553 | 0.474 | -0.616 | 0.113 | -- | -0.165 | 13 | 20.37 | 424 | -- | -- |
| 172.69 | 0.612 | 3.41 | 0.514 | 0.475 | -0.647 | -- | -0.254 | -0.173 | 13.1 | 20.4 | 424 | -- | -- |
| 172.9 | 0.612 | 3.41 | 0.558 | 0.474 | -0.619 | -- | -- | -0.164 | 13 | 20.4 | 424 | -- | -- |
| 183.73 | 0.631 | 3.41 | 0.468 | -- | -0.649 | -- | -0.361 | -0.148 | -- | 21.32 | 818 | -- | -- |
| 184.27 | 0.636 | 3.43 | 0.344 | 0.465 | -- | 0.177 | -- | -0.29 | 12.3 | -- | -- | -- | -- |
| 184.4 | 0.636 | 3.43 | 0.351 | 0.465 | -- | -- | -- | -0.289 | 12.4 | -- | -- | -- | -- |
| 184.04 | 0.632 | 3.4 | 0.567 | -- | -0.618 | -- | -- | -0.121 | -- | 21.48 | 839 | -- | -- |
| 180.25 | 0.625 | 3.42 | -- | 0.468 | -0.454 | -- | -- | -0.244 | 12.9 | 20.7 | 408 | -- | -- |
| 197.98 | 0.657 | 3.44 | 0.336 | -- | -- | -- | -- | -0.297 | -- | -- | -- | -- | -- |
| 187.66 | 0.641 | 3.44 | -- | 0.46 | -- | -- | -- | -0.328 | 12.3 | -- | -- | -- | -- |
| 190.57 | 0.643 | 3.42 | -- | -- | -0.459 | -- | -- | -0.196 | -- | 22.24 | 829 | -- | -- |
| 200.95 | 0.662 | 3.45 | -- | -- | -- | -- | -- | -0.334 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 166.22 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 13 | 22 |
| 3 | 166.74 | wind | 5.0 | 4320 | > th | dose independent | rect. | 20 | 6 |
| 4 | 166.81 | wind | 7.0 | 4320 | < th | dose independent | rect. | 24 | 1 |
| 5 | 166.81 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 21 | 5 |
| 12 | 167.12 | wind | 5.0 | 4320 | < th | dose independent | rect. | 20 | 6 |
| 14 | 167.33 | wind | 5.0 | 4320 | > th | dose independent | rect. | 24 | 1 |
| 17 | 167.67 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 7 |
| 19 | 167.74 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 24 | 1 |
| 20 | 167.76 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 21 | 167.76 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 22 | 167.78 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 33 | 168.28 | temperature | 20.0 | 30 | > th | dose independent | rect. | 13 | 22 |
| 49 | 168.89 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 11 | 2 |
| 56 | 168.98 | wind | 1.0 | 4320 | > th | dose dependent | rect. | 2 | 1 |
| 59 | 169.07 | wind | 5.0 | 4320 | < th | dose dependent | rect. | 2 | 1 |
| 71 | 169.25 | wind | 3.0 | 1440 | < th | dose independent | rect. | 2 | 1 |
| 81 | 169.49 | temperature | 20.0 | 270 | > th | dose independent | rect. | 11 | 21 |
| 84 | 169.54 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 20 | 3 |
| 86 | 169.62 | wind | 3.0 | 1440 | > th | dose independent | rect. | 2 | 1 |
| 124 | 170.24 | wind | 3.0 | 30 | > th | dose independent | rect. | 11 | 2 |
| 147 | 170.51 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 11 | 2 |
| 150 | 170.58 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 152 | 170.59 | temperature | 30.0 | 10 | > th | dose dependent | rect. | 12 | 1 |
| 163 | 170.80 | temperature | 30.0 | 90 | > th | dose dependent | rect. | 10 | 1 |
| 165 | 170.86 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 18 | 6 |
| 167 | 170.88 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 13 | 22 |
| 171 | 170.96 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 21 | 3 |
| 175 | 171.02 | wind | 7.0 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 178 | 171.04 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 13 | 22 |
| 180 | 171.07 | radiation | 40.0 | 30 | < th | dose independent | rect. | 13 | 22 |
| 196 | 171.23 | temperature | 20.0 | 270 | > th | dose independent | rect. | 1 | 15 |
| 217 | 171.46 | temperature | 20.0 | 270 | > th | dose independent | rect. | 24 | 8 |
| 226 | 171.55 | wind | 7.0 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 246 | 171.76 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 1 | 9 |
| 250 | 171.79 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 11 | 15 |
| 251 | 171.82 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 23 | 9 |
| 272 | 172.00 | humidity | 60.0 | 10 | > th | dose independent | rect. | 13 | 22 |
| 279 | 172.03 | wind | 9.0 | 10 | < th | dose independent | rect. | 13 | 22 |
| 286 | 172.06 | radiation | 10.0 | 30 | > th | dose independent | rect. | 11 | 2 |
| 296 | 172.12 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 9 |
| 307 | 172.17 | wind | 1.0 | 90 | > th | dose independent | rect. | 23 | 14 |
| 308 | 172.17 | atmosphere | 1000.0 | 270 | > th | dose dependent | rect. | 9 | 1 |
| 309 | 172.18 | humidity | 50.0 | 30 | > th | dose independent | rect. | 11 | 2 |
| 319 | 172.23 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 16 | 21 |
| 323 | 172.25 | wind | 1.0 | 90 | > th | dose independent | rect. | 16 | 21 |
| 327 | 172.27 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 18 | 14 |
| 333 | 172.31 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 12 | 2 |
| 337 | 172.31 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 12 | 2 |
| 340 | 172.31 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 14 | 22 |
| 353 | 172.35 | temperature | 10.0 | 30 | > th | dose independent | rect. | 11 | 2 |
| 355 | 172.35 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 11 | 2 |
| 356 | 172.35 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 11 | 2 |
| 357 | 172.35 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 11 | 2 |
| 358 | 172.35 | temperature | 10.0 | 30 | > th | dose independent | rect. | 13 | 22 |
| 359 | 172.35 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 11 | 2 |
| 401 | 172.50 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 17 | 10 |
| 409 | 172.53 | wind | 1.0 | 30 | > th | dose dependent | rect. | 11 | 2 |
| 417 | 172.57 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 1 | 1 |
| 427 | 172.61 | temperature | 20.0 | 270 | > th | dose independent | rect. | 24 | 22 |
| 436 | 172.63 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 13 | 1 |
| 446 | 172.66 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 13 | 22 |
| 448 | 172.66 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 13 | 22 |
| 453 | 172.68 | wind | 9.0 | 30 | < th | dose independent | rect. | 11 | 2 |
| 456 | 172.69 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 467 | 172.72 | wind | 1.0 | 90 | > th | dose dependent | rect. | 16 | 21 |
| 469 | 172.73 | temperature | 20.0 | 10 | > th | dose independent | rect. | 13 | 18 |
| 478 | 172.76 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 14 | 3 |
| 488 | 172.78 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 19 | 8 |
| 490 | 172.79 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 13 | 1 |
| 535 | 172.88 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 2 | 9 |
| 555 | 172.93 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 12 | 2 |
| 578 | 172.98 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 11 | 2 |
| 583 | 172.99 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 21 | 5 |
| 631 | 173.09 | wind | 1.0 | 90 | > th | dose dependent | rect. | 23 | 14 |
| 655 | 173.13 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 23 | 4 |
| 688 | 173.21 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 13 | 22 |
| 716 | 173.28 | temperature | 20.0 | 270 | > th | dose independent | rect. | 18 | 13 |
| 722 | 173.31 | radiation | 40.0 | 90 | < th | dose independent | rect. | 3 | 13 |
| 730 | 173.32 | wind | 5.0 | 1440 | > th | dose dependent | rect. | 20 | 11 |
| 734 | 173.32 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 13 | 17 |
| 790 | 173.43 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 19 | 1 |
| 817 | 173.49 | temperature | 25.0 | 720 | < th | dose dependent | sin | 14 | NA |
| 841 | 173.53 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 24 | 16 |
| 866 | 173.57 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 11 | 17 |
| 889 | 173.62 | temperature | 20.0 | 270 | > th | dose independent | rect. | 18 | 23 |
| 910 | 173.65 | temperature | 15.0 | 720 | > th | dose dependent | sin | 12 | NA |
| 950 | 173.72 | wind | 1.0 | 90 | > th | dose independent | rect. | 4 | 9 |