Os05g0153600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : FAR1 domain containing protein.
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Os05g0153600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : FAR1 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 141.94 | 0.56 | 8.18 | -0.553 | 0.55 | -1.51 | -0.151 | -2.17 | -0.87 | 9.68 | 20.13 | 4312 | -- | -- |
| 142.48 | 0.556 | 8.14 | -0.0967 | 0.533 | -1.51 | -0.122 | -- | -0.87 | 9.6 | 23.69 | 4306 | -- | -- |
| 141.94 | 0.555 | 8.17 | -0.535 | 0.551 | -1.47 | -- | -1.93 | -0.867 | 9.59 | 20.81 | 4321 | -- | -- |
| 142.54 | 0.556 | 8.13 | -0.0952 | 0.535 | -1.51 | -- | -- | -0.869 | 9.56 | 23.7 | 4316 | -- | -- |
| 154.19 | 0.578 | 8.17 | -0.46 | -- | -1.56 | -- | -1.67 | -0.825 | -- | 21.23 | 3743 | -- | -- |
| 212.18 | 0.683 | 8.17 | -0.644 | 0.592 | -- | -0.162 | -- | -1.02 | 10.3 | -- | -- | -- | -- |
| 212.28 | 0.682 | 8.17 | -0.651 | 0.593 | -- | -- | -- | -1.02 | 10.2 | -- | -- | -- | -- |
| 154.66 | 0.579 | 8.14 | -0.0973 | -- | -1.64 | -- | -- | -0.83 | -- | 23.48 | 3754 | -- | -- |
| 142.75 | 0.556 | 8.13 | -- | 0.537 | -1.53 | -- | -- | -0.848 | 9.57 | 23.57 | 4328 | -- | -- |
| 233.67 | 0.714 | 8.18 | -0.659 | -- | -- | -- | -- | -1.03 | -- | -- | -- | -- | -- |
| 223.44 | 0.699 | 8.15 | -- | 0.597 | -- | -- | -- | -0.952 | 10.3 | -- | -- | -- | -- |
| 154.79 | 0.579 | 8.13 | -- | -- | -1.66 | -- | -- | -0.804 | -- | 23.3 | 3757 | -- | -- |
| 245.13 | 0.731 | 8.17 | -- | -- | -- | -- | -- | -0.953 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 130.72 | temperature | 25 | 4320 | < th | dose independent | rect. | 19 | 1 |
| 2 | 130.74 | temperature | 25 | 4320 | > th | dose independent | rect. | 19 | 1 |
| 3 | 130.97 | temperature | 25 | 4320 | > th | dose independent | rect. | 19 | 3 |
| 5 | 131.18 | temperature | 25 | 4320 | < th | dose independent | rect. | 19 | 3 |
| 46 | 135.51 | temperature | 20 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 47 | 135.60 | temperature | 20 | 4320 | > th | dose dependent | rect. | 18 | 8 |
| 51 | 135.68 | temperature | 20 | 4320 | > th | dose dependent | rect. | 19 | 3 |
| 70 | 136.04 | temperature | 30 | 4320 | < th | dose dependent | rect. | 18 | 1 |
| 71 | 136.05 | temperature | 20 | 4320 | > th | dose dependent | rect. | 24 | 1 |
| 73 | 136.06 | temperature | 30 | 4320 | < th | dose dependent | rect. | 17 | 5 |
| 121 | 136.87 | temperature | 10 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 130 | 136.94 | temperature | 30 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 138 | 137.01 | temperature | 25 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 194 | 137.60 | temperature | 25 | 4320 | < th | dose independent | rect. | 17 | 15 |
| 198 | 137.61 | temperature | 20 | 4320 | > th | dose dependent | sin | 13 | NA |
| 227 | 137.80 | temperature | 25 | 4320 | > th | dose independent | rect. | 17 | 15 |
| 247 | 138.02 | temperature | 25 | 4320 | < th | dose independent | sin | 14 | NA |
| 287 | 138.28 | temperature | 25 | 4320 | > th | dose independent | sin | 14 | NA |
| 297 | 138.34 | temperature | 25 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 428 | 139.46 | temperature | 20 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 553 | 140.24 | temperature | 30 | 4320 | < th | dose dependent | sin | 15 | NA |
| 941 | 141.89 | temperature | 20 | 4320 | > th | dose dependent | rect. | 6 | 23 |
| 965 | 141.97 | temperature | 20 | 4320 | > th | dose dependent | no | NA | NA |