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Os05g0151300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Rubber elongation factor family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 14.7 (0.018) R2 : 0.606
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.09 (0.043) R2dC : 0.558 R2C : 0.538
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.297 (0.0379) R2dN8 : 0.0684 R2N8 : 0.0484
σ : 0.34
deviance : 52.77
__
_____
C
peak time of C : 11.3
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
36.41 0.284 14.7 0.671 0.52 -0.536 0.463 0.357 0.362 10.6 12.28 9 -- --
36.67 0.282 14.7 0.648 0.493 -0.545 0.206 -- 0.353 10.5 12.37 8 -- --
36.69 0.282 14.7 0.71 0.591 -0.473 -- 0.106 0.383 10.8 12.77 8 -- --
36.54 0.282 14.7 0.686 0.555 -0.499 -- -- 0.366 10.8 12.27 7 -- --
41 0.298 14.7 0.69 -- -0.885 -- -0.0493 0.349 -- 10.65 11 -- --
40.57 0.299 14.7 0.678 1.1 -- 0.0559 -- 0.372 11.3 -- -- -- --
40.59 0.298 14.7 0.68 1.1 -- -- -- 0.373 11.3 -- -- -- --
40.46 0.296 14.7 0.688 -- -0.896 -- -- 0.351 -- 10.58 7 -- --
48.45 0.324 14.7 -- 0.623 -0.485 -- -- 0.295 10.7 22.03 6 -- --
116.03 0.503 14.7 0.652 -- -- -- -- 0.362 -- -- -- -- --
52.77 0.34 14.7 -- 1.09 -- -- -- 0.297 11.3 -- -- -- --
52.86 0.339 14.7 -- -- -0.893 -- -- 0.286 -- 11.7 5 -- --
127.25 0.527 14.7 -- -- -- -- -- 0.29 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 31.00 temperature 10.0 10 > th dose dependent rect. 6 10
10 31.82 temperature 30.0 10 < th dose dependent rect. 2 10
11 31.97 temperature 30.0 90 < th dose dependent rect. 1 10
31 32.70 temperature 20.0 270 > th dose independent rect. 4 10
42 32.88 wind 7.0 270 < th dose independent rect. 15 13
50 33.03 radiation 40.0 270 < th dose independent rect. 24 10
54 33.10 temperature 25.0 270 > th dose independent rect. 15 4
57 33.13 radiation 40.0 270 < th dose dependent rect. 24 10
61 33.25 temperature 25.0 90 < th dose independent rect. 1 10
63 33.26 humidity 70.0 270 > th dose independent rect. 24 11
71 33.32 wind 9.0 270 < th dose dependent rect. 15 4
82 33.41 wind 5.0 90 < th dose independent rect. 15 6
83 33.41 wind 7.0 10 < th dose independent rect. 16 14
85 33.43 humidity 90.0 90 < th dose independent rect. 6 10
92 33.49 wind 7.0 270 < th dose independent rect. 15 4
99 33.52 precipitation 0.1 270 < th dose independent rect. 4 11
100 33.52 precipitation 0.1 270 < th dose dependent rect. 4 11
110 33.59 humidity 50.0 270 > th dose independent rect. 24 10
111 33.59 atmosphere 1015.0 270 < th dose independent rect. 24 10
113 33.60 temperature 10.0 270 > th dose independent rect. 24 10
114 33.60 atmosphere 995.0 270 > th dose independent rect. 24 10
115 33.60 temperature 10.0 270 > th dose independent rect. 10 14
126 33.66 wind 9.0 270 < th dose independent rect. 24 10
128 33.68 wind 9.0 270 < th dose independent rect. 4 11
132 33.70 radiation 40.0 270 < th dose independent rect. 14 14
136 33.71 humidity 50.0 270 > th dose dependent rect. 24 11
144 33.74 atmosphere 1015.0 270 < th dose independent rect. 4 11
145 33.74 temperature 10.0 270 > th dose independent rect. 15 13
146 33.74 atmosphere 1015.0 10 < th dose independent rect. 16 14
168 33.82 atmosphere 1015.0 270 < th dose independent rect. 15 13
171 33.83 precipitation 0.1 270 < th dose independent rect. 24 10
172 33.83 precipitation 0.1 270 < th dose independent rect. 10 14
175 33.83 precipitation 0.1 270 < th dose dependent rect. 24 10
176 33.83 precipitation 0.1 270 < th dose dependent rect. 10 14
185 33.86 temperature 15.0 270 > th dose independent rect. 19 20
188 33.87 temperature 10.0 30 > th dose dependent rect. 16 14
209 33.95 radiation 10.0 10 < th dose dependent rect. 2 19
212 33.96 radiation 30.0 10 < th dose dependent rect. 16 14
214 33.97 humidity 50.0 10 > th dose dependent rect. 2 10
218 33.98 wind 1.0 270 > th dose independent rect. 24 19
238 34.05 wind 9.0 270 < th dose independent rect. 24 19
241 34.06 humidity 50.0 270 > th dose independent rect. 10 14
242 34.06 temperature 10.0 270 > th dose dependent rect. 15 4
247 34.08 atmosphere 995.0 270 > th dose independent rect. 4 11
255 34.09 temperature 10.0 10 > th dose dependent rect. 21 19
263 34.12 wind 9.0 270 < th dose independent rect. 10 14
264 34.12 temperature 15.0 90 > th dose independent rect. 21 19
265 34.13 radiation 1.0 270 > th dose independent rect. 5 10
266 34.13 atmosphere 1015.0 270 < th dose independent rect. 23 21
271 34.15 wind 1.0 270 > th dose independent rect. 19 5
275 34.16 wind 9.0 10 < th dose independent rect. 6 10
290 34.17 wind 1.0 270 > th dose independent rect. 10 14
291 34.17 radiation 10.0 4320 < th dose dependent rect. 22 5
297 34.18 atmosphere 1015.0 270 < th dose independent rect. 24 19
300 34.19 temperature 10.0 270 > th dose independent rect. 19 5
301 34.19 temperature 30.0 270 < th dose independent rect. 19 5
302 34.19 humidity 50.0 270 > th dose independent rect. 19 5
303 34.19 atmosphere 995.0 270 > th dose independent rect. 19 5
304 34.19 radiation 1.0 270 < th dose independent rect. 19 5
311 34.19 temperature 10.0 270 > th dose independent rect. 24 19
312 34.19 radiation 1.0 270 < th dose dependent rect. 19 5
318 34.20 radiation 40.0 270 < th dose independent rect. 14 5
323 34.20 precipitation 0.1 270 < th dose independent rect. 15 13
329 34.20 precipitation 0.1 270 < th dose dependent rect. 15 13
339 34.22 wind 9.0 270 < th dose independent rect. 19 5
358 34.26 humidity 50.0 270 > th dose independent rect. 19 20
359 34.27 wind 1.0 270 > th dose independent rect. 20 3
368 34.28 radiation 30.0 43200 < th dose dependent rect. 22 5
374 34.30 precipitation 0.1 270 < th dose independent rect. 19 5
378 34.30 precipitation 0.1 270 < th dose dependent rect. 19 5
387 34.31 wind 9.0 270 < th dose independent rect. 19 20
399 34.33 temperature 10.0 270 > th dose independent rect. 15 4
401 34.33 atmosphere 1010.0 270 < th dose independent rect. 15 4
428 34.36 humidity 50.0 270 > th dose independent rect. 4 11
435 34.36 temperature 30.0 10 < th dose dependent rect. 21 5
440 34.37 atmosphere 995.0 10 > th dose independent rect. 16 14
446 34.38 radiation 20.0 10 < th dose independent rect. 16 14
452 34.39 precipitation 0.1 270 < th dose independent rect. 15 4
457 34.39 atmosphere 995.0 10 > th dose independent rect. 2 19
460 34.39 precipitation 0.1 270 < th dose dependent rect. 15 4
482 34.41 wind 1.0 270 > th dose independent rect. 15 4
484 34.41 precipitation 0.1 270 < th dose independent rect. 24 19
490 34.41 precipitation 0.1 270 < th dose dependent rect. 24 19
498 34.43 temperature 10.0 10 > th dose dependent rect. 16 5
507 34.44 temperature 30.0 90 < th dose dependent rect. 21 4
512 34.44 wind 9.0 30 < th dose dependent rect. 16 14
515 34.45 atmosphere 995.0 10 > th dose independent rect. 16 5
517 34.45 precipitation 0.1 10 < th dose independent rect. 6 10
520 34.45 precipitation 0.1 270 < th dose independent rect. 19 20
524 34.45 precipitation 0.1 10 < th dose dependent rect. 6 10
527 34.45 precipitation 0.1 270 < th dose dependent rect. 19 20
532 34.46 wind 7.0 90 < th dose independent rect. 21 19
540 34.47 temperature 10.0 10 > th dose independent rect. 6 10
542 34.47 atmosphere 1015.0 10 < th dose independent rect. 6 10
543 34.47 temperature 10.0 10 > th dose independent rect. 16 14
544 34.47 radiation 40.0 10 < th dose independent rect. 16 14
559 34.48 atmosphere 995.0 270 > th dose independent rect. 19 19
570 34.50 wind 9.0 10 < th dose independent rect. 21 19
584 34.51 temperature 10.0 270 > th dose dependent rect. 16 2
596 34.53 radiation 20.0 10 < th dose independent rect. 16 5
608 34.54 temperature 10.0 10 > th dose independent rect. 21 5
609 34.54 temperature 30.0 10 < th dose independent rect. 21 5
610 34.54 humidity 50.0 10 > th dose independent rect. 21 5
614 34.54 atmosphere 995.0 10 > th dose independent rect. 21 5
615 34.54 radiation 1.0 10 < th dose independent rect. 21 5
620 34.54 precipitation 0.1 10 < th dose independent rect. 16 5
623 34.54 temperature 10.0 10 > th dose independent rect. 2 19
625 34.54 atmosphere 995.0 270 > th dose independent rect. 24 19
626 34.54 atmosphere 1015.0 10 < th dose independent rect. 2 19
630 34.54 radiation 1.0 10 < th dose dependent rect. 21 5
635 34.54 precipitation 0.1 10 < th dose dependent rect. 16 5
642 34.56 wind 9.0 10 < th dose independent rect. 21 5
704 34.59 precipitation 0.1 10 < th dose independent rect. 2 19
711 34.59 precipitation 0.1 10 < th dose dependent rect. 2 19
712 34.59 radiation 10.0 10 < th dose dependent rect. 24 23
719 34.60 wind 9.0 10 < th dose independent rect. 2 19
725 34.61 temperature 10.0 10 > th dose independent rect. 16 5
727 34.61 atmosphere 1010.0 10 < th dose independent rect. 16 5
734 34.61 temperature 10.0 10 > th dose independent rect. 21 19
744 34.62 temperature 25.0 10 > th dose dependent rect. 22 18
750 34.63 temperature 10.0 1440 > th dose independent rect. 22 5
753 34.63 temperature 30.0 1440 < th dose independent rect. 22 5
757 34.63 humidity 50.0 1440 > th dose independent rect. 22 5
765 34.63 atmosphere 995.0 1440 > th dose independent rect. 22 5
770 34.63 radiation 1.0 1440 < th dose independent rect. 22 5
792 34.63 atmosphere 995.0 270 > th dose independent rect. 10 14
793 34.63 temperature 10.0 1440 > th dose independent rect. 3 19
805 34.64 precipitation 0.1 10 < th dose independent rect. 21 5
808 34.64 precipitation 0.1 10 < th dose independent rect. 16 14
811 34.64 precipitation 0.1 10 < th dose dependent rect. 21 5
815 34.64 precipitation 0.1 10 < th dose dependent rect. 16 14
817 34.64 radiation 20.0 10 < th dose dependent rect. 16 18
818 34.65 wind 1.0 10 > th dose independent rect. 16 5
865 34.68 radiation 40.0 10 < th dose dependent rect. 16 5
932 34.71 temperature 10.0 270 > th dose dependent rect. 20 17
981 34.74 radiation 40.0 270 < th dose independent rect. 24 19