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Os05g0140500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to RNA binding motif protein 8B-related.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.8 (0.0162) R2 : 0.0105
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0752 (0.0342) R2dN8 : 0.0135 R2N8 : 0.0105
σ : 0.306
deviance : 42.98
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
17.63 0.197 11.8 0.215 0.461 -0.286 0.19 -0.0209 -0.0506 11.8 50.07 8 -- --
17.61 0.197 11.8 0.214 0.46 -0.289 0.202 -- -0.051 11.8 49.78 7 -- --
17.71 0.198 11.8 0.225 0.454 -0.295 -- -0.176 -0.0502 11.7 50 7 -- --
17.78 0.198 11.8 0.221 0.453 -0.306 -- -- -0.0505 11.7 48.88 7 -- --
25.87 0.237 11.8 0.22 -- -0.641 -- -0.118 -0.0576 -- 51.69 2 -- --
18.88 0.204 11.8 0.212 0.602 -- 0.267 -- -0.0441 12.5 -- -- -- --
19.18 0.205 11.8 0.222 0.602 -- -- -- -0.0429 12.5 -- -- -- --
25.9 0.237 11.8 0.218 -- -0.602 -- -- -0.0652 -- 55.9 2 -- --
19.03 0.204 11.8 -- 0.449 -0.362 -- -- -0.0738 11.7 40 13 -- --
41.91 0.303 11.8 0.201 -- -- -- -- -0.0528 -- -- -- -- --
20.48 0.212 11.8 -- 0.598 -- -- -- -0.0676 12.4 -- -- -- --
27.15 0.243 11.8 -- -- -0.784 -- -- -0.0809 -- 40 13 -- --
42.98 0.306 11.8 -- -- -- -- -- -0.0752 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 16.40 humidity 60.0 270 > th dose independent rect. 24 19
3 16.56 humidity 60.0 90 > th dose independent rect. 1 22
11 16.69 temperature 25.0 90 > th dose dependent rect. 23 8
13 16.70 humidity 50.0 90 > th dose dependent rect. 1 22
15 16.71 humidity 50.0 90 > th dose dependent rect. 1 20
17 16.73 humidity 60.0 10 > th dose independent rect. 1 22
21 16.75 humidity 50.0 30 > th dose dependent rect. 7 23
22 16.77 humidity 50.0 90 > th dose dependent rect. 1 18
27 16.81 humidity 60.0 720 > th dose independent rect. 1 12
50 16.93 humidity 50.0 10 > th dose dependent rect. 3 18
54 16.94 humidity 60.0 10 > th dose independent rect. 3 20
72 16.98 radiation 1.0 90 < th dose independent rect. 1 22
79 17.00 humidity 60.0 720 > th dose independent rect. 23 14
86 17.02 radiation 1.0 90 > th dose independent sin 2 NA
96 17.03 humidity 60.0 720 < th dose dependent rect. 19 18
107 17.05 humidity 60.0 720 < th dose dependent rect. 9 4
120 17.05 radiation 1.0 90 < th dose dependent rect. 3 16
124 17.06 radiation 1.0 90 < th dose independent rect. 3 16
126 17.06 humidity 60.0 720 < th dose dependent sin 7 NA
134 17.07 atmosphere 995.0 90 > th dose dependent rect. 5 22
135 17.07 radiation 1.0 90 < th dose dependent rect. 1 22
141 17.08 atmosphere 1010.0 90 < th dose dependent rect. 1 7
151 17.10 humidity 90.0 90 < th dose independent rect. 23 13
166 17.12 humidity 50.0 30 > th dose dependent rect. 3 14
170 17.13 humidity 60.0 10 > th dose independent rect. 14 16
171 17.13 atmosphere 1015.0 10 < th dose independent rect. 14 16
175 17.13 humidity 60.0 720 < th dose dependent rect. 11 2
176 17.13 atmosphere 995.0 10 > th dose dependent rect. 23 13
177 17.13 atmosphere 995.0 270 > th dose dependent rect. 20 14
182 17.14 humidity 60.0 270 > th dose independent rect. 10 9
191 17.15 radiation 1.0 90 < th dose independent rect. 3 14
194 17.15 radiation 1.0 90 < th dose independent rect. 1 18
216 17.17 radiation 1.0 90 < th dose independent sin 1 NA
219 17.17 humidity 60.0 1440 < th dose independent rect. 19 16
220 17.17 humidity 60.0 10 > th dose independent rect. 7 23
245 17.19 radiation 1.0 90 > th dose independent rect. 5 9
252 17.19 radiation 20.0 1440 < th dose independent rect. 17 14
254 17.19 humidity 60.0 1440 > th dose independent rect. 19 16
268 17.20 humidity 60.0 1440 < th dose independent rect. 9 2
278 17.20 radiation 1.0 90 < th dose dependent rect. 1 18
282 17.21 humidity 60.0 1440 > th dose independent rect. 4 7
283 17.21 humidity 60.0 1440 > th dose independent rect. 2 9
293 17.21 humidity 50.0 10 > th dose dependent rect. 14 16
314 17.22 humidity 60.0 720 < th dose independent rect. 19 18
315 17.22 radiation 1.0 90 < th dose dependent sin 1 NA
319 17.23 humidity 60.0 1440 > th dose independent rect. 9 2
322 17.23 humidity 60.0 720 > th dose independent rect. 7 6
354 17.24 humidity 60.0 1440 > th dose independent rect. 21 14
357 17.24 temperature 30.0 10 < th dose independent rect. 14 16
368 17.25 humidity 60.0 720 < th dose independent sin 7 NA
371 17.25 radiation 1.0 90 < th dose independent rect. 3 5
386 17.26 atmosphere 1015.0 270 < th dose independent rect. 12 17
388 17.26 atmosphere 1015.0 30 < th dose independent rect. 12 18
403 17.26 radiation 1.0 90 < th dose dependent rect. 3 14
420 17.27 humidity 60.0 270 > th dose independent rect. 12 17
421 17.27 atmosphere 1000.0 90 > th dose independent rect. 5 22
422 17.27 atmosphere 1015.0 90 < th dose independent rect. 1 22
436 17.28 radiation 20.0 1440 < th dose independent rect. 4 3
447 17.28 humidity 50.0 270 > th dose dependent rect. 11 8
458 17.29 humidity 60.0 720 > th dose independent sin 5 NA
477 17.29 humidity 50.0 90 > th dose dependent rect. 1 12
489 17.30 radiation 20.0 1440 < th dose independent rect. 2 5
517 17.30 radiation 1.0 90 < th dose independent rect. 3 19
519 17.30 temperature 30.0 30 < th dose independent rect. 1 22
520 17.30 atmosphere 1010.0 270 < th dose dependent rect. 24 5
543 17.31 radiation 1.0 30 < th dose dependent rect. 3 20
548 17.32 temperature 25.0 90 > th dose independent rect. 23 8
562 17.32 wind 9.0 10 < th dose independent rect. 14 16
567 17.32 wind 9.0 90 < th dose independent rect. 1 22
573 17.33 atmosphere 1000.0 90 > th dose independent rect. 23 2
582 17.33 atmosphere 995.0 10 > th dose dependent rect. 6 8
591 17.33 atmosphere 1015.0 30 < th dose dependent rect. 1 22
595 17.34 wind 1.0 14400 > th dose independent rect. 18 1
607 17.34 atmosphere 995.0 90 > th dose dependent rect. 23 2
625 17.35 humidity 80.0 90 > th dose independent rect. 3 2
626 17.35 radiation 10.0 10 < th dose independent rect. 3 3
630 17.35 temperature 30.0 30 < th dose independent rect. 12 18
635 17.35 temperature 30.0 10 < th dose dependent rect. 24 1
636 17.35 temperature 15.0 30 > th dose dependent rect. 3 3
637 17.35 radiation 1.0 90 < th dose dependent rect. 3 5
647 17.35 humidity 50.0 10 > th dose dependent rect. 12 18
656 17.36 humidity 80.0 10 > th dose independent rect. 3 3
661 17.36 wind 7.0 30 < th dose independent rect. 12 18
662 17.36 precipitation 0.1 90 < th dose independent rect. 5 22
675 17.36 temperature 25.0 720 > th dose dependent rect. 20 11
699 17.36 precipitation 0.1 90 < th dose dependent rect. 5 22
727 17.38 wind 5.0 90 < th dose independent rect. 23 2
730 17.38 temperature 10.0 90 > th dose independent rect. 23 2
731 17.38 temperature 30.0 90 < th dose independent rect. 23 2
732 17.38 humidity 50.0 90 > th dose independent rect. 23 2
736 17.38 radiation 1.0 90 < th dose independent rect. 23 2
741 17.38 precipitation 0.1 90 < th dose independent rect. 23 2
743 17.38 atmosphere 1000.0 10 > th dose independent rect. 6 8
752 17.38 temperature 10.0 90 > th dose independent rect. 1 22
754 17.38 wind 3.0 14400 < th dose dependent rect. 15 2
755 17.38 atmosphere 1015.0 90 < th dose dependent rect. 3 2
756 17.38 radiation 1.0 90 < th dose dependent rect. 23 2
761 17.38 precipitation 0.1 90 < th dose dependent rect. 23 2
783 17.39 humidity 90.0 90 < th dose independent sin 6 NA
793 17.39 atmosphere 995.0 90 > th dose independent rect. 1 22
795 17.39 radiation 1.0 90 > th dose independent rect. 8 23
803 17.39 atmosphere 1015.0 30 < th dose dependent rect. 12 18
812 17.40 radiation 40.0 10 < th dose independent rect. 14 16
814 17.40 humidity 50.0 30 > th dose independent rect. 12 18
816 17.40 radiation 10.0 30 < th dose dependent rect. 3 3
820 17.40 humidity 90.0 30 < th dose dependent rect. 23 13
823 17.40 atmosphere 1015.0 10 < th dose dependent rect. 14 16
836 17.41 humidity 80.0 270 > th dose independent rect. 21 3
838 17.41 temperature 10.0 10 > th dose independent rect. 6 8
842 17.41 atmosphere 1015.0 10 < th dose independent rect. 6 8
844 17.41 precipitation 0.1 10 < th dose independent rect. 6 8
849 17.41 temperature 10.0 10 > th dose independent rect. 14 16
851 17.41 atmosphere 995.0 10 > th dose independent rect. 14 16
856 17.41 wind 9.0 270 < th dose independent rect. 24 20
858 17.41 wind 9.0 10 < th dose independent rect. 1 22
868 17.41 precipitation 0.1 10 < th dose dependent rect. 6 8
878 17.41 humidity 90.0 10 < th dose dependent rect. 17 21
880 17.42 wind 1.0 90 > th dose independent rect. 23 2
881 17.42 wind 9.0 90 < th dose independent rect. 3 2
882 17.42 temperature 10.0 90 > th dose independent rect. 3 2
884 17.42 temperature 30.0 90 < th dose independent rect. 3 2
885 17.42 humidity 50.0 90 > th dose independent rect. 3 2
888 17.42 atmosphere 995.0 90 > th dose independent rect. 3 2
889 17.42 atmosphere 1010.0 90 < th dose independent rect. 3 2
894 17.42 wind 5.0 270 < th dose independent rect. 20 4
903 17.42 temperature 10.0 90 > th dose independent rect. 5 22
905 17.42 radiation 40.0 10 < th dose independent rect. 1 22
907 17.42 atmosphere 1015.0 10 < th dose independent rect. 1 23
908 17.42 atmosphere 1005.0 90 > th dose dependent sin 8 NA
909 17.42 humidity 50.0 90 > th dose dependent rect. 3 2
913 17.42 wind 9.0 270 < th dose dependent rect. 20 4
914 17.42 atmosphere 995.0 10 > th dose dependent rect. 23 4
917 17.42 atmosphere 1010.0 30 < th dose dependent rect. 3 5
918 17.42 temperature 10.0 30 > th dose dependent rect. 6 6
929 17.42 atmosphere 1015.0 270 < th dose dependent rect. 12 17
936 17.43 precipitation 0.1 90 < th dose independent rect. 3 2
938 17.43 temperature 20.0 30 > th dose independent rect. 6 6
939 17.43 atmosphere 1000.0 30 > th dose independent rect. 6 6
944 17.43 atmosphere 1000.0 30 > th dose independent rect. 23 13
949 17.43 wind 9.0 270 < th dose independent rect. 12 17
953 17.43 precipitation 0.1 90 < th dose dependent rect. 3 2
972 17.43 atmosphere 1015.0 30 < th dose dependent rect. 12 20
977 17.44 precipitation 0.1 1440 < th dose independent rect. 24 2
978 17.44 atmosphere 1000.0 270 > th dose independent rect. 20 4