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Os05g0133900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Shaggy-related protein kinase eta (EC 2.7.1.-) (ASK-eta) (BRASSINOSTEROID-INSENSITIVE 2) (ULTRACURVATA1).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.1 (0.0166) R2 : 0.0179
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.101 (0.035) R2dN8 : 0.0231 R2N8 : 0.0179
σ : 0.313
deviance : 45.07
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
22.28 0.222 10.1 0.119 0.543 0.56 -0.44 -0.0954 0.16 15.4 80 1372 -- --
22.28 0.22 10.1 0.111 0.541 0.556 -0.442 -- 0.159 15.4 80 1365 -- --
22.83 0.223 10.1 0.121 0.541 0.555 -- -0.148 0.153 15.6 80 1356 -- --
22.85 0.223 10.1 0.103 0.539 0.539 -- -- 0.155 15.6 79.96 1356 -- --
36.45 0.283 10.1 0.0445 -- -0.268 -- 0.247 0.101 -- 79.4 1229 -- --
26.08 0.239 10.1 0.0917 0.576 -- -0.367 -- 0.125 15.5 -- -- -- --
26.48 0.241 10.1 0.0852 0.576 -- -- -- 0.123 15.6 -- -- -- --
36.26 0.28 10.1 0.123 -- 0.744 -- -- 0.141 -- 77.7 1223 -- --
23.11 0.224 10.1 -- 0.534 0.524 -- -- 0.144 15.6 81 1347 -- --
44.97 0.313 10.1 0.061 -- -- -- -- 0.108 -- -- -- -- --
26.67 0.242 10.1 -- 0.575 -- -- -- 0.113 15.6 -- -- -- --
36.64 0.282 10.1 -- -- 0.744 -- -- 0.134 -- 77.74 1223 -- --
45.07 0.313 10.1 -- -- -- -- -- 0.101 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 21.12 humidity 80.0 720 < th dose independent rect. 19 1
2 21.41 humidity 90.0 720 < th dose dependent rect. 19 2
5 21.52 temperature 20.0 720 < th dose independent rect. 4 3
6 21.56 temperature 20.0 720 < th dose independent rect. 5 1
7 21.57 humidity 80.0 720 < th dose dependent rect. 19 7
16 21.70 temperature 25.0 720 < th dose dependent rect. 4 3
18 21.79 temperature 25.0 720 < th dose dependent rect. 4 1
38 21.95 humidity 80.0 1440 > th dose independent rect. 11 18
55 22.00 humidity 80.0 1440 > th dose independent rect. 11 15
62 22.03 humidity 80.0 1440 < th dose independent rect. 11 21
67 22.05 humidity 80.0 1440 < th dose independent rect. 11 18
77 22.07 temperature 20.0 270 > th dose independent rect. 18 8
131 22.17 humidity 80.0 1440 > th dose independent sin 17 NA
151 22.20 temperature 20.0 270 > th dose independent rect. 6 19
168 22.22 temperature 25.0 720 < th dose dependent sin 7 NA
207 22.28 humidity 80.0 1440 < th dose independent sin 17 NA
211 22.28 precipitation 0.1 10 < th dose independent rect. 16 15
213 22.28 humidity 50.0 720 > th dose dependent rect. 18 9
215 22.28 precipitation 0.1 10 < th dose dependent rect. 16 15
218 22.29 radiation 10.0 270 < th dose independent rect. 1 9
233 22.31 humidity 80.0 1440 > th dose independent rect. 19 22
234 22.31 humidity 80.0 1440 < th dose independent rect. 19 22
237 22.31 humidity 70.0 1440 > th dose dependent rect. 11 18
245 22.32 temperature 25.0 720 < th dose dependent rect. 23 16
248 22.33 temperature 15.0 30 > th dose independent rect. 16 15
256 22.34 wind 5.0 90 < th dose independent rect. 7 20
266 22.35 temperature 20.0 10 > th dose independent rect. 20 8
290 22.37 humidity 80.0 270 > th dose independent rect. 19 7
324 22.40 humidity 80.0 1440 > th dose independent rect. 3 23
344 22.42 humidity 80.0 1440 > th dose independent no NA NA
372 22.43 humidity 80.0 1440 > th dose independent rect. 23 23
381 22.44 humidity 80.0 1440 < th dose independent no NA NA
385 22.44 radiation 10.0 10 < th dose independent rect. 16 18
390 22.44 humidity 80.0 1440 < th dose independent rect. 3 23
391 22.44 humidity 80.0 1440 < th dose independent rect. 5 23
398 22.45 humidity 80.0 10 > th dose independent rect. 20 8
409 22.45 humidity 70.0 1440 > th dose dependent sin 17 NA
410 22.45 radiation 40.0 1440 < th dose dependent rect. 18 10
428 22.46 humidity 80.0 1440 > th dose independent rect. 13 23
429 22.46 humidity 80.0 1440 < th dose independent rect. 1 23
433 22.46 humidity 80.0 1440 < th dose independent rect. 23 23
444 22.46 temperature 20.0 720 > th dose dependent rect. 23 16
459 22.47 humidity 80.0 1440 < th dose independent rect. 13 23
477 22.48 temperature 10.0 1440 > th dose independent rect. 8 9
482 22.48 temperature 10.0 1440 > th dose independent rect. 17 15
503 22.49 temperature 10.0 30 > th dose independent rect. 7 9
506 22.49 atmosphere 1015.0 30 < th dose independent rect. 7 9
510 22.49 atmosphere 995.0 30 > th dose independent rect. 16 15
511 22.49 radiation 20.0 30 < th dose independent rect. 16 15
520 22.49 radiation 30.0 270 < th dose dependent rect. 1 8
526 22.49 humidity 60.0 720 > th dose dependent rect. 15 12
531 22.50 wind 9.0 30 < th dose independent rect. 7 9
532 22.50 precipitation 0.1 30 < th dose independent rect. 7 9
548 22.50 radiation 10.0 10 < th dose independent rect. 23 23
550 22.50 humidity 70.0 90 > th dose dependent rect. 19 8
552 22.50 precipitation 0.1 30 < th dose dependent rect. 7 9
563 22.51 humidity 80.0 720 > th dose independent rect. 19 2
582 22.52 wind 5.0 270 < th dose independent rect. 7 18
586 22.52 temperature 20.0 720 > th dose dependent sin 5 NA
610 22.53 atmosphere 995.0 30 > th dose independent rect. 7 9
626 22.53 humidity 60.0 720 > th dose dependent rect. 15 10
674 22.55 wind 9.0 30 < th dose independent rect. 16 15
709 22.56 humidity 70.0 10 > th dose dependent rect. 20 8
722 22.57 temperature 20.0 10 > th dose independent rect. 22 6
733 22.57 temperature 20.0 720 > th dose dependent rect. 4 2
734 22.57 temperature 20.0 720 > th dose dependent rect. 3 4
745 22.58 radiation 20.0 90 < th dose independent rect. 3 7
777 22.58 wind 9.0 90 < th dose dependent rect. 7 20
807 22.60 precipitation 0.1 270 < th dose independent rect. 1 6
817 22.60 precipitation 0.1 270 < th dose dependent rect. 1 6
819 22.60 temperature 10.0 270 > th dose dependent rect. 18 8
841 22.61 wind 5.0 90 < th dose independent rect. 9 18
862 22.62 wind 5.0 90 < th dose independent rect. 3 4
890 22.63 precipitation 0.1 270 < th dose independent rect. 3 2
901 22.63 precipitation 0.1 270 < th dose dependent rect. 3 2
903 22.63 radiation 40.0 90 < th dose dependent rect. 3 8
918 22.64 radiation 10.0 270 < th dose independent sin 8 NA
919 22.64 wind 5.0 270 < th dose independent rect. 1 6
930 22.64 humidity 50.0 10 > th dose independent rect. 16 15
939 22.64 humidity 50.0 1440 > th dose dependent rect. 19 2
960 22.65 precipitation 0.1 90 < th dose independent rect. 3 4
971 22.65 precipitation 0.1 90 < th dose dependent rect. 3 4
992 22.66 precipitation 0.1 270 < th dose independent rect. 2 15