BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0133900 Os05g0133900|AK067302
(667 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G17310.2 | chr3:5909294-5912838 REVERSE LENGTH=711 338 5e-93
AT5G15380.1 | chr5:4991347-4994826 FORWARD LENGTH=625 283 2e-76
AT5G14620.1 | chr5:4715429-4718578 REVERSE LENGTH=627 250 2e-66
>AT3G17310.2 | chr3:5909294-5912838 REVERSE LENGTH=711
Length = 710
Score = 338 bits (867), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 224/681 (32%), Positives = 340/681 (49%), Gaps = 94/681 (13%)
Query: 49 HVRSQFIGMGFSPMLVDRVLQKHGDRDSDTILEALLSQSALQKSGSESGSLGDLFDSDNE 108
+V+S I MGF P LV + + ++G D + +LE L + + G L
Sbjct: 55 NVKSLLIEMGFCPTLVQKAIDENGQDDFELLLEILTKSTETEPPGPSFHGL--------- 105
Query: 109 ENSSHFAPRKEVIQDIKVEADSSSEKRSYLLSTMNFSQREVDLALNQLGEEASLEQLVDF 168
P+ E DI+ E D + L TM F + VD AL++LG++ ++++VDF
Sbjct: 106 -----MEPKPE--PDIEYETD----RIRIALLTMKFPENLVDFALDRLGKDTPIDEMVDF 154
Query: 169 IVTGQVS------------GCSGGNENGDASN------EVKDESLFGVMDKTLHLLQMGF 210
IV Q++ G E+ D + EV +E LF MDKTL LL+MGF
Sbjct: 155 IVAAQLAEKYAEESEDSLDGAEINEEDEDVTPVTARGPEVPNEQLFETMDKTLRLLEMGF 214
Query: 211 TEEEVSSVIDKAGPEATVLELADTI----FARRIASSIE--QKEVKVEPDFLDETETSYS 264
+ +E+S I+K G + + LA++I F +E +K+V ++ T S S
Sbjct: 215 SNDEISMAIEKIGTKGQISVLAESIVTGEFPAECHDDLEDIEKKVSAAAPAVNRTCLSKS 274
Query: 265 ---------------------AYHPSNSGLRYY-----DDDHDNIRIKRAK----HMFID 294
A + G+ + D+ + R KR K + + +
Sbjct: 275 WRFVGVGAQKEDGGGGSSSGTANIKPDPGIESFPFPATDNVGETSRGKRPKDEDENAYPE 334
Query: 295 DSAGSSSRA--------GNQPNL--DPWLKDHRATTSDGSVKEEFDA-MTPGIRRNVRSD 343
+ G R G+ + PW++D + EF + M P + +++
Sbjct: 335 EYTGYDDRGKRLRPEDMGDSSSFMETPWMQDEWKDNT-----YEFPSVMQPRLSQSLGPK 389
Query: 344 VANPPYFLYGNVVEIPKATWRQLSEFLYNVEPEFVNSQFFSALSRKEGYIHNLPTEGRRN 403
VA PYF YG + E+ + W ++S FL+ + PE V+++ SAL R EGY+HNLPT R N
Sbjct: 390 VARRPYFFYGQLGELSPSWWSKISGFLFGIHPEHVDTRLCSALRRTEGYLHNLPTVNRFN 449
Query: 404 LVPRSPMTIEEAFPFTRQCWPSWDTRKQLNS-VATEVAGIEQLCERLGKMVRDSGGYLSQ 462
+P +TI++A P R WP WD RK NS + + LCER+G+ + + G +Q
Sbjct: 450 TLPNPRLTIQDAMPHMRSWWPQWDIRKHFNSGTCSNMKDATLLCERIGRRIAECKGKPTQ 509
Query: 463 EKKTHIMHQCKLANLIWVGPDRLSPLDPQQVERILGYPRKHTNLFGLNPQDRIEAMRYSF 522
+ +T I+ C +NLIW+ P+ LSPL+P+ +E I+GYP HTN+ G +R++ Y F
Sbjct: 510 QDQTLILRHCHTSNLIWIAPNILSPLEPEHLECIMGYPMNHTNIGGGRLAERLKLFDYCF 569
Query: 523 QTDTLGYLLSVLKDLYPDGLRVLSIYSGIGGAAIALHRLGIPLQCVVSVDQSDTNRKILR 582
QTDTLGY LSVLK ++P GL VLS++SGIGGA IAL RLGI L+ VVSV+ +R IL+
Sbjct: 570 QTDTLGYHLSVLKSMFPQGLTVLSLFSGIGGAEIALDRLGIHLKGVVSVESCGLSRNILK 629
Query: 583 RWWSNTEQKGQLRQINTIWKLKINVLEDLVKEXXXXXXXXXXXXSS---CKGGTTVNSSM 639
RWW + Q G+L QI I L LE L++ S+ + + +
Sbjct: 630 RWWQTSGQTGELVQIEEIKSLTAKRLETLMQRFGGFDFVICQNPSTPLDLSKEISNSEAC 689
Query: 640 GMDSNQFFEYVRVVQRVKHIM 660
D F E+ RV +RV+ +M
Sbjct: 690 EFDYTLFNEFARVTKRVRDMM 710
>AT5G15380.1 | chr5:4991347-4994826 FORWARD LENGTH=625
Length = 624
Score = 283 bits (725), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 190/615 (30%), Positives = 306/615 (49%), Gaps = 71/615 (11%)
Query: 52 SQFIGMGFSPMLVDRVLQKHGDRDSD--TILEALLSQSALQKSGSESGSLGDLFDSDNEE 109
+ F+ MGFS ++ R +++ + + ILE L + SA ++ S + + F +
Sbjct: 64 ASFVEMGFSTQMIARAIEETAGANMEPMMILETLFNYSASTEASSSKSKVINHFIAMG-- 121
Query: 110 NSSHFAPRKEVIQDIKVEADSSSEKRSYLLSTMNFSQREVDLALNQLGEEASLEQLVDFI 169
P + VI+ ++ D + + L T EVD +L E + ++
Sbjct: 122 -----FPEEHVIKAMQEHGDEDVGEITNALLTY----AEVD----KLRESEDMNININDD 168
Query: 170 VTGQVSGCSGGNENGDASNEVKDESLFGVMDKTLHLLQMGFTEEEVSSVIDKAGPEATVL 229
+ S +E + +N ++ + L++MG+ E+ + I++ G +A++
Sbjct: 169 DDDNLYSLSSDDEEDELNNSSNEDRILQA------LIKMGYLREDAAIAIERCGEDASME 222
Query: 230 ELADTIFARRIASSIEQKEVKVEPDFLDETETSYSAYHPSNSGLRYYDDD----HDNIRI 285
E+ D I A ++A + E+ EPD +N R Y + + + I
Sbjct: 223 EVVDFICAAQMARQFD--EIYAEPD--------KKELMNNNKKRRTYTETPRKPNTDQLI 272
Query: 286 KRAKHMFIDDSAGSSSRAGNQPNLDPWLKDHRATTSDGSVKEEFDAMTPGIRRNVRSDVA 345
K M PN P L HR P I R
Sbjct: 273 SLPKEMI----------GFGVPN-HPGLMMHRPVP------------IPDIARG------ 303
Query: 346 NPPYFLYGNVVEIPKATWRQLSEFLYNVEPEFVNSQFFSALSRKEGYIHNLPTEGRRNLV 405
PP+F Y NV PK W ++S LY++ PEFV+S+ F A +RK GYIHNLP + R +
Sbjct: 304 -PPFFYYENVAMTPKGVWAKISSHLYDIVPEFVDSKHFCAAARKRGYIHNLPIQNRFQIQ 362
Query: 406 PRSPMTIEEAFPFTRQCWPSWDTRKQLNSVATEVAGIEQLCERLGKMVRDSGGYLSQEKK 465
P TI+EAFP T++ WPSWD R +LN + T +A +L E++ + + G + +
Sbjct: 363 PPQHNTIQEAFPLTKRWWPSWDGRTKLNCLLTCIAS-SRLTEKIREALERYDGETPLDVQ 421
Query: 466 THIMHQCKLANLIWVGPDRLSPLDPQQVERILGYPRKHTNLFGLNPQDRIEAMRYSFQTD 525
+M++CK NL+WVG ++L+PLD ++E++LG+PR HT G++ DR +++ SFQ D
Sbjct: 422 KWVMYECKKWNLVWVGKNKLAPLDADEMEKLLGFPRDHTRGGGISTTDRYKSLGNSFQVD 481
Query: 526 TLGYLLSVLKDLYPDGLRVLSIYSGIGGAAIALHRLGIPLQCVVSVDQSDTNRKILRRWW 585
T+ Y LSVLK L+P+G+ VLS+++GIGG +ALHRL I + VVSV+ SD NR ILR +W
Sbjct: 482 TVAYHLSVLKPLFPNGINVLSLFTGIGGGEVALHRLQIKMNVVVSVEISDANRNILRSFW 541
Query: 586 SNTEQKGQLRQINTIWKLKINVLEDLVKEXXXXXXXXXXXXSSCKGGTTVNSSMGM---D 642
T QKG LR+ + KL N +E L+ E + G + +G+
Sbjct: 542 EQTNQKGILREFKDVQKLDDNTIERLMDEYGGFDLVIGGSPCNNLAGGNRHHRVGLGGEH 601
Query: 643 SNQFFEYVRVVQRVK 657
S+ FF+Y R+++ V+
Sbjct: 602 SSLFFDYCRILEAVR 616
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 74/167 (44%), Gaps = 30/167 (17%)
Query: 23 AAVNPQPALLRATV--KEEEGQPXXXXXHVRSQFIGMGFSPMLVDRVLQKHGDRDSDTIL 80
A N +P ++ T+ + V + FI MGF V + +Q+HGD D I
Sbjct: 84 AGANMEPMMILETLFNYSASTEASSSKSKVINHFIAMGFPEEHVIKAMQEHGDEDVGEIT 143
Query: 81 EALLSQSALQKSGSESGSLGDL-----------FDSDNEENSSHFAPRKEVIQDIKVEAD 129
ALL+ + + K ES + SD+EE+ + +
Sbjct: 144 NALLTYAEVDKL-RESEDMNININDDDDDNLYSLSSDDEEDELN---------------N 187
Query: 130 SSSEKRSY-LLSTMNFSQREVDLALNQLGEEASLEQLVDFIVTGQVS 175
SS+E R L M + + + +A+ + GE+AS+E++VDFI Q++
Sbjct: 188 SSNEDRILQALIKMGYLREDAAIAIERCGEDASMEEVVDFICAAQMA 234
>AT5G14620.1 | chr5:4715429-4718578 REVERSE LENGTH=627
Length = 626
Score = 250 bits (638), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 152/473 (32%), Positives = 237/473 (50%), Gaps = 59/473 (12%)
Query: 201 KTLHLLQMGFTEEEVSSVIDKAGPEATVLELADTIFARRIASSIEQKEVKVEPDFLDETE 260
K L++MGF+E E S +++ G + EL D + A ++A + F E E
Sbjct: 197 KIRSLVKMGFSELEASLAVERCGENVDIAELTDFLCAAQMAREFSE--------FYTEHE 248
Query: 261 TSYSAYHPSNSGLRYYDD--------DHDNIRIKRAKHMFIDDSAGSSSRAGNQPNLDPW 312
+ N R ++ D + IR+ F PN +P
Sbjct: 249 EQKPRH---NIKKRRFESKGEPRSSVDDEPIRLPNPMIGF------------GVPN-EPG 292
Query: 313 LKDHRATTSDGSVKEEFDAMTPGIRRNVRSDVANPPYFLYGNVVEIPKATWRQLSEFLYN 372
L HR+ P + R PP+F Y NV PK W +S L+
Sbjct: 293 LITHRSL--------------PELARG-------PPFFYYENVALTPKGVWETISRHLFE 331
Query: 373 VEPEFVNSQFFSALSRKEGYIHNLPTEGRRNLVPRSPMTIEEAFPFTRQCWPSWDTRKQL 432
+ PEFV+S++F +RK GYIHNLP R + P TI +AFP +++ WP WD R +L
Sbjct: 332 IPPEFVDSKYFCVAARKRGYIHNLPINNRFQIQPPPKYTIHDAFPLSKRWWPEWDKRTKL 391
Query: 433 NSVATEVAGIEQLCERLGKMVRDSGGYLSQEK--KTHIMHQCKLANLIWVGPDRLSPLDP 490
N + T G QL R+ + K + +++ QCK NL+WVG ++ +PL+P
Sbjct: 392 NCILT-CTGSAQLTNRIRVALEPYNEEPEPPKHVQRYVIDQCKKWNLVWVGKNKAAPLEP 450
Query: 491 QQVERILGYPRKHTNLFGLNPQDRIEAMRYSFQTDTLGYLLSVLKDLYPDGLRVLSIYSG 550
++E ILG+P+ HT G++ +R +++ SFQ DT+ Y LSVLK ++P G+ VLS+++G
Sbjct: 451 DEMESILGFPKNHTRGGGMSRTERFKSLGNSFQVDTVAYHLSVLKPIFPHGINVLSLFTG 510
Query: 551 IGGAAIALHRLGIPLQCVVSVDQSDTNRKILRRWWSNTEQKGQLRQINTIWKLKINVLED 610
IGG +ALHRL I ++ VVSV+ S NR IL+ +W T Q G+L + + I L + +E
Sbjct: 511 IGGGEVALHRLQIKMKLVVSVEISKVNRNILKDFWEQTNQTGELIEFSDIQHLTNDTIEG 570
Query: 611 LVKEXXXXXXXXXXXXSSCKGGTTVNSSMGMDSNQ---FFEYVRVVQRVKHIM 660
L+++ + G S +G++ +Q FFEY R+++ V+ M
Sbjct: 571 LMEKYGGFDLVIGGSPCNNLAGGNRVSRVGLEGDQSSLFFEYCRILEVVRARM 623
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.315 0.133 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 14,373,156
Number of extensions: 615600
Number of successful extensions: 1758
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 1749
Number of HSP's successfully gapped: 5
Length of query: 667
Length of database: 11,106,569
Length adjustment: 105
Effective length of query: 562
Effective length of database: 8,227,889
Effective search space: 4624073618
Effective search space used: 4624073618
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 115 (48.9 bits)