Os05g0128400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Metal tolerance protein 1 (AtMTP1) (Zinc transporter ZAT-1) (ZAT1p) [Contains: Metal tolerance protein 1 short form].
FiT-DB / Search/ Help/ Sample detail
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Os05g0128400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Metal tolerance protein 1 (AtMTP1) (Zinc transporter ZAT-1) (ZAT1p) [Contains: Metal tolerance protein 1 short form].
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 19.2 | 0.206 | 12.4 | 1.81 | 0.468 | -0.484 | -0.324 | -2.57 | 0.273 | 8.14 | 0.202 | 7402 | -- | -- |
| 21.57 | 0.216 | 12.5 | 1.42 | 0.49 | -0.177 | -0.211 | -- | 0.155 | 8.23 | 19.34 | 17847 | -- | -- |
| 19.5 | 0.206 | 12.4 | 1.8 | 0.466 | -0.476 | -- | -2.54 | 0.272 | 8.22 | 0.24 | 7386 | -- | -- |
| 21.56 | 0.216 | 12.5 | 1.45 | 0.488 | -0.163 | -- | -- | 0.162 | 8.43 | 15.92 | 17875 | -- | -- |
| 27.97 | 0.248 | 12.5 | 1.43 | -- | -0.263 | -- | -0.0283 | 0.207 | -- | 0.234 | 7371 | -- | -- |
| 22.57 | 0.223 | 12.5 | 1.45 | 0.479 | -- | -0.161 | -- | 0.209 | 8.52 | -- | -- | -- | -- |
| 22.65 | 0.223 | 12.5 | 1.44 | 0.478 | -- | -- | -- | 0.209 | 8.57 | -- | -- | -- | -- |
| 27.98 | 0.247 | 12.5 | 1.43 | -- | -0.263 | -- | -- | 0.207 | -- | 0.234 | 7371 | -- | -- |
| 68.29 | 0.385 | 12.5 | -- | 0.479 | 0.61 | -- | -- | 0.052 | 8.45 | 121.8 | 47520 | -- | -- |
| 35.51 | 0.278 | 12.5 | 1.44 | -- | -- | -- | -- | 0.213 | -- | -- | -- | -- | -- |
| 77.34 | 0.411 | 12.5 | -- | 0.484 | -- | -- | -- | 0.0486 | 8.35 | -- | -- | -- | -- |
| 49.55 | 0.328 | 12.6 | -- | -- | -0.997 | -- | -- | -0.221 | -- | 0.009931 | 47520 | -- | -- |
| 90.37 | 0.444 | 12.5 | -- | -- | -- | -- | -- | 0.0534 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 17.97 | temperature | 20.0 | 90 | > th | dose independent | rect. | 9 | 19 |
| 2 | 18.19 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 4 | 18.25 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 8 | 18.33 | temperature | 20.0 | 30 | > th | dose independent | rect. | 11 | 17 |
| 16 | 18.38 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 10 | 8 |
| 19 | 18.39 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 10 | 8 |
| 22 | 18.40 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 24 | 18.41 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 94 | 18.56 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 104 | 18.59 | radiation | 40.0 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 124 | 18.59 | radiation | 40.0 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 175 | 18.73 | temperature | 20.0 | 43200 | < th | dose dependent | rect. | 19 | 1 |
| 182 | 18.76 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 184 | 18.76 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 16 | 5 |
| 186 | 18.76 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 187 | 18.77 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 188 | 18.77 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 16 | 7 |
| 190 | 18.78 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 5 | 3 |
| 199 | 18.80 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 16 | 10 |
| 211 | 18.83 | humidity | 90.0 | 270 | < th | dose independent | rect. | 8 | 6 |
| 213 | 18.83 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 16 | 16 |
| 254 | 18.90 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 22 | 10 |
| 267 | 18.91 | wind | 7.0 | 270 | < th | dose independent | rect. | 12 | 21 |
| 279 | 18.93 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 289 | 18.93 | temperature | 20.0 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 304 | 18.95 | temperature | 20.0 | 43200 | < th | dose independent | sin | 23 | NA |
| 310 | 18.95 | temperature | 20.0 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 316 | 18.96 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 9 | 5 |
| 321 | 18.96 | humidity | 50.0 | 270 | > th | dose independent | rect. | 8 | 19 |
| 322 | 18.96 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 21 |
| 328 | 18.96 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 8 | 8 |
| 335 | 18.97 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 9 | 5 |
| 343 | 18.97 | temperature | 20.0 | 43200 | < th | dose dependent | sin | 16 | NA |
| 347 | 18.97 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 9 | 6 |
| 356 | 18.97 | temperature | 20.0 | 43200 | < th | dose dependent | rect. | 6 | 19 |
| 403 | 19.00 | temperature | 15.0 | 270 | > th | dose independent | rect. | 8 | 7 |
| 411 | 19.00 | temperature | 20.0 | 43200 | < th | dose dependent | rect. | 6 | 3 |
| 432 | 19.01 | temperature | 20.0 | 43200 | > th | dose independent | sin | 23 | NA |
| 453 | 19.02 | wind | 1.0 | 43200 | < th | dose independent | rect. | 2 | 2 |
| 455 | 19.02 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 17 | 4 |
| 456 | 19.02 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 17 | 6 |
| 477 | 19.02 | temperature | 20.0 | 43200 | < th | dose dependent | rect. | 16 | 19 |
| 501 | 19.03 | temperature | 20.0 | 43200 | < th | dose dependent | no | NA | NA |
| 503 | 19.03 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 4 |
| 511 | 19.03 | temperature | 20.0 | 43200 | < th | dose dependent | rect. | 16 | 16 |
| 565 | 19.03 | temperature | 20.0 | 43200 | < th | dose dependent | rect. | 22 | 23 |
| 571 | 19.04 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 584 | 19.04 | temperature | 20.0 | 43200 | < th | dose dependent | rect. | 18 | 14 |
| 625 | 19.05 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 17 | 9 |
| 660 | 19.06 | temperature | 20.0 | 43200 | < th | dose dependent | sin | 0 | NA |
| 753 | 19.09 | temperature | 20.0 | 43200 | < th | dose dependent | sin | 7 | NA |
| 759 | 19.09 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 14 | 1 |
| 877 | 19.13 | wind | 1.0 | 43200 | > th | dose independent | rect. | 2 | 2 |
| 902 | 19.14 | humidity | 50.0 | 270 | > th | dose independent | rect. | 9 | 17 |
| 914 | 19.15 | temperature | 15.0 | 270 | > th | dose independent | rect. | 9 | 4 |
| 948 | 19.17 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 4 | 5 |
| 955 | 19.18 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 965 | 19.18 | temperature | 20.0 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 974 | 19.19 | wind | 5.0 | 90 | < th | dose independent | rect. | 4 | 5 |
| 987 | 19.20 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 988 | 19.20 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 1000 | 19.20 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 6 | 1 |