BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0128400 Os05g0128400|AK100735
(418 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G46800.1 | chr2:19238128-19239324 FORWARD LENGTH=399 259 2e-69
AT3G58810.1 | chr3:21750551-21751849 FORWARD LENGTH=433 250 1e-66
AT3G61940.1 | chr3:22937445-22938449 FORWARD LENGTH=335 221 7e-58
AT2G29410.1 | chr2:12616810-12617937 FORWARD LENGTH=376 164 9e-41
AT2G04620.1 | chr2:1610506-1612902 REVERSE LENGTH=799 74 1e-13
AT1G33020.1 | chr1:11962746-11964832 FORWARD LENGTH=549 73 3e-13
>AT2G46800.1 | chr2:19238128-19239324 FORWARD LENGTH=399
Length = 398
Score = 259 bits (663), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 130/180 (72%), Positives = 147/180 (81%)
Query: 1 MDSHNSAPPQIAEVRMDISSSTSVAAGNKVCRGAACDFSDSSNSSKDARERMASMRKLII 60
M+S + I EV + S + +KVC A C FSDS N+S DA ER ASMRKL I
Sbjct: 1 MESSSPHHSHIVEVNVGKSDEERIIVASKVCGEAPCGFSDSKNASGDAHERSASMRKLCI 60
Query: 61 AVILCIIFMAVEVVGGIKANSLAILTDAAHLLSDVAAFAISLFSLWAAGWEATPQQSYGF 120
AV+LC++FM+VEVVGGIKANSLAILTDAAHLLSDVAAFAISLFSLWAAGWEATP+Q+YGF
Sbjct: 61 AVVLCLVFMSVEVVGGIKANSLAILTDAAHLLSDVAAFAISLFSLWAAGWEATPRQTYGF 120
Query: 121 FRIEILGALVSIQLIWLLAGILVYEAIVRLINESGEVQGSLMFAVSAFGLFVNIIMAVLL 180
FRIEILGALVSIQLIWLL GILVYEAI+R++ E+ EV G LMF V+AFGL VNIIMAVLL
Sbjct: 121 FRIEILGALVSIQLIWLLTGILVYEAIIRIVTETSEVNGFLMFLVAAFGLVVNIIMAVLL 180
Score = 253 bits (645), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 127/171 (74%), Positives = 139/171 (81%), Gaps = 6/171 (3%)
Query: 247 DAEEPLLKSDAGCDSTQSGAKDAKKARRNINVHSAYLHVLGDSIQSIGVMIGGAIIWYKP 306
D E LL TQ AK+ +K RNIN+ AYLHVLGDSIQS+GVMIGGAIIWY P
Sbjct: 234 DVTEQLLDKS----KTQVAAKEKRK--RNINLQGAYLHVLGDSIQSVGVMIGGAIIWYNP 287
Query: 307 EWKIIDLICTLIFSVIVLFTTIKMLRNILEVLMESTPREIDATSLENGLRDMDGVVAVHE 366
EWKI+DLICTL FSVIVL TTI M+RNILEVLMESTPREIDAT LE GL +M+ VVAVHE
Sbjct: 288 EWKIVDLICTLAFSVIVLGTTINMIRNILEVLMESTPREIDATKLEKGLLEMEEVVAVHE 347
Query: 367 LHIWAITVGKVLLACHVTITQDADADQMLDKVIGYIKSEYNISHVTIQIER 417
LHIWAITVGKVLLACHV I +ADAD +L+KVI YI+ EYNISHVTIQIER
Sbjct: 348 LHIWAITVGKVLLACHVNIRPEADADMVLNKVIDYIRREYNISHVTIQIER 398
>AT3G58810.1 | chr3:21750551-21751849 FORWARD LENGTH=433
Length = 432
Score = 250 bits (638), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 130/181 (71%), Positives = 147/181 (81%), Gaps = 1/181 (0%)
Query: 1 MDSHNSAPPQIAEVRMDISS-STSVAAGNKVCRGAACDFSDSSNSSKDARERMASMRKLI 59
M H + ++ ++SS TS+ K C A C FSD+ SS +A+ER ASMRKL+
Sbjct: 55 MKDHIHEHDHMVQICGEVSSGETSLVGIKKTCGEAPCGFSDAKTSSIEAQERAASMRKLL 114
Query: 60 IAVILCIIFMAVEVVGGIKANSLAILTDAAHLLSDVAAFAISLFSLWAAGWEATPQQSYG 119
IAV+LC IF+ VEVVGGIKANSLAILTDAAHLLSDVAAFAISLFSLWA+GW+A PQQSYG
Sbjct: 115 IAVLLCAIFIVVEVVGGIKANSLAILTDAAHLLSDVAAFAISLFSLWASGWKANPQQSYG 174
Query: 120 FFRIEILGALVSIQLIWLLAGILVYEAIVRLINESGEVQGSLMFAVSAFGLFVNIIMAVL 179
FFRIEILGALVSIQ+IWLLAGILVYEAIVRL N SGEV+GSLMFAVSA GL VNI MA+L
Sbjct: 175 FFRIEILGALVSIQMIWLLAGILVYEAIVRLNNGSGEVEGSLMFAVSAVGLLVNIAMAIL 234
Query: 180 L 180
L
Sbjct: 235 L 235
Score = 248 bits (634), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 120/164 (73%), Positives = 140/164 (85%), Gaps = 1/164 (0%)
Query: 256 DAGCDSTQ-SGAKDAKKARRNINVHSAYLHVLGDSIQSIGVMIGGAIIWYKPEWKIIDLI 314
D+G D +Q S +K +RN+N+ AYLHVLGDSIQS+GVMIGGAIIWYKPEWKI+DLI
Sbjct: 269 DSGHDESQLSDVLIEQKKQRNVNIQGAYLHVLGDSIQSVGVMIGGAIIWYKPEWKILDLI 328
Query: 315 CTLIFSVIVLFTTIKMLRNILEVLMESTPREIDATSLENGLRDMDGVVAVHELHIWAITV 374
CTL+FSVIVL TTI MLRNILEVLMESTPREID T LE G+ +++ VVAVHELHIWAITV
Sbjct: 329 CTLVFSVIVLGTTIGMLRNILEVLMESTPREIDPTMLEKGVCEIEEVVAVHELHIWAITV 388
Query: 375 GKVLLACHVTITQDADADQMLDKVIGYIKSEYNISHVTIQIERE 418
GK+LLACHV I +A+AD +LDK+I YIK E+NISHVTIQIER+
Sbjct: 389 GKLLLACHVKIRPEAEADMVLDKIIDYIKREHNISHVTIQIERQ 432
>AT3G61940.1 | chr3:22937445-22938449 FORWARD LENGTH=335
Length = 334
Score = 221 bits (562), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 107/150 (71%), Positives = 121/150 (80%)
Query: 268 DAKKARRNINVHSAYLHVLGDSIQSIGVMIGGAIIWYKPEWKIIDLICTLIFSVIVLFTT 327
+ K RNINV AYLHVLGD IQSIGVMIGG +IWY P+WK+IDLICTL FSVIVL TT
Sbjct: 185 EKSKEIRNINVQGAYLHVLGDLIQSIGVMIGGGMIWYNPKWKVIDLICTLFFSVIVLGTT 244
Query: 328 IKMLRNILEVLMESTPREIDATSLENGLRDMDGVVAVHELHIWAITVGKVLLACHVTITQ 387
IKMLR+ILEVLMESTPREIDA LE GL +++ VV VHELHIWAITVGK L +CHV +
Sbjct: 245 IKMLRSILEVLMESTPREIDARQLEKGLMEIEEVVDVHELHIWAITVGKALFSCHVKVRP 304
Query: 388 DADADQMLDKVIGYIKSEYNISHVTIQIER 417
+A + +L+KVI YI EY ISHVTIQIER
Sbjct: 305 EAGDEMVLNKVIDYIWREYRISHVTIQIER 334
Score = 204 bits (520), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 104/154 (67%), Positives = 123/154 (79%), Gaps = 4/154 (2%)
Query: 28 NKVCRGAACDFSDSSNSSKDARERMASMRKLIIAVILCIIFMAVEVVGGIKANSLAILTD 87
+KVC AC FS SS+ DA++R ASMRKL V+LC++FM++EVV GIKANSLAIL D
Sbjct: 6 SKVCGETACGFSTSSS---DAKKRAASMRKLCFVVVLCLLFMSIEVVCGIKANSLAILAD 62
Query: 88 AAHLLSDVAAFAISLFSLWAAGWEATPQQSYGFFRIEILGALVSIQLIWLLAGILVYEAI 147
AAHLL+DV AFAIS+ SLWA+ WEA P+QSYGFFRIEILG LVSIQLIWLL GILVYEA+
Sbjct: 63 AAHLLTDVGAFAISMLSLWASSWEANPRQSYGFFRIEILGTLVSIQLIWLLTGILVYEAV 122
Query: 148 VRLINESG-EVQGSLMFAVSAFGLFVNIIMAVLL 180
RL+ E+ +V G M V+AFGL VNIIM V+L
Sbjct: 123 TRLVQETNDDVDGFFMVLVAAFGLVVNIIMIVVL 156
>AT2G29410.1 | chr2:12616810-12617937 FORWARD LENGTH=376
Length = 375
Score = 164 bits (415), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 72/155 (46%), Positives = 103/155 (66%), Gaps = 1/155 (0%)
Query: 264 SGAKDAKKARRNINVHSAYLHVLGDSIQSIGVMIGGAIIWYKPEWKIIDLICTLIFSVIV 323
G K + K NIN+ AYLH + D IQS+GVMIGG IIW KP+W ++DLICTL+FS
Sbjct: 222 KGEKSSSK-EMNINIQGAYLHAMADMIQSLGVMIGGGIIWVKPKWVLVDLICTLVFSAFA 280
Query: 324 LFTTIKMLRNILEVLMESTPREIDATSLENGLRDMDGVVAVHELHIWAITVGKVLLACHV 383
L T+ +L+NI +LME PR++D LE GL+ +DGV V++LH+W ITVG+++L+CH+
Sbjct: 281 LAATLPILKNIFGILMERVPRDMDIEKLERGLKRIDGVKIVYDLHVWEITVGRIVLSCHI 340
Query: 384 TITQDADADQMLDKVIGYIKSEYNISHVTIQIERE 418
A +++ V + + Y I H T+Q+E E
Sbjct: 341 LPEPGASPKEIITGVRNFCRKSYGIYHATVQVESE 375
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 111/162 (68%)
Query: 19 SSSTSVAAGNKVCRGAACDFSDSSNSSKDARERMASMRKLIIAVILCIIFMAVEVVGGIK 78
S S S N +C F+ + + +ER S R+L + L +I M+V++VGG K
Sbjct: 19 SPSPSKTEENLGVVPLSCAFTRQEHCVSETKEREESTRRLSSLIFLYLIVMSVQIVGGFK 78
Query: 79 ANSLAILTDAAHLLSDVAAFAISLFSLWAAGWEATPQQSYGFFRIEILGALVSIQLIWLL 138
ANSLA++TDAAHLLSDVA +SL ++ + WEA P+ S+GF R+E+L A +S+QLIWL+
Sbjct: 79 ANSLAVMTDAAHLLSDVAGLCVSLLAIKVSSWEANPRNSFGFKRLEVLAAFLSVQLIWLV 138
Query: 139 AGILVYEAIVRLINESGEVQGSLMFAVSAFGLFVNIIMAVLL 180
+G++++EAI RL++ S EV G +MF +SAFG F+N++M + L
Sbjct: 139 SGVIIHEAIQRLLSRSREVNGEIMFGISAFGFFMNLVMVLWL 180
>AT2G04620.1 | chr2:1610506-1612902 REVERSE LENGTH=799
Length = 798
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 71/120 (59%), Gaps = 1/120 (0%)
Query: 56 RKLIIAVILCIIFMAVEVVGGIKANSLAILTDAAHLLSDVAAFAISLFSLWAAGWEATPQ 115
RK+ + +++ +M VE V G +NSL +++DA H+L D AA AI L++ + + A Q
Sbjct: 418 RKIALFLLINTAYMVVEFVAGFMSNSLGLISDACHMLFDCAALAIGLYASYISRLPANHQ 477
Query: 116 QSYGFFRIEILGALVSIQLIWLLAGILVYEAIVRLINESGEVQGSLMFAVSAFGLFVNII 175
+YG R E+L V+ + L+ ++V E+I R+++ E+ + + VS GL VNI+
Sbjct: 478 YNYGRGRFEVLSGYVNAVFLVLVGALIVLESIERILDPQ-EISTNSLLVVSVGGLLVNIV 536
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 74/129 (57%), Gaps = 7/129 (5%)
Query: 267 KDAKKARRNI--NVHSAYLHVLGDSIQSIGVMIGGAIIWYKPEWKIIDLICTLIFSVIVL 324
K KK R+I N+ +LHVL D++ S+GV+I +I YK W + D ++ S++++
Sbjct: 643 KSEKKEHRHIDHNMEGIFLHVLADTMGSVGVVISTLLIKYK-GWLVADPASSIFISILII 701
Query: 325 FTTIKMLRNILEVLMESTPREIDATSLENGLRDM---DGVVAVHELHIWAITVGKVLLAC 381
+ I +LRN E+L++ PR L+ +R++ GV ++ LH+W+ T V+
Sbjct: 702 ASVIPLLRNSAEILLQRVPRA-HRQDLKEAMRNILKTKGVCSIQRLHVWSFTNSDVVATL 760
Query: 382 HVTITQDAD 390
H+ ++ D+D
Sbjct: 761 HLLVSADSD 769
>AT1G33020.1 | chr1:11962746-11964832 FORWARD LENGTH=549
Length = 548
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 49/74 (66%), Gaps = 10/74 (13%)
Query: 345 EIDATSLENGLRDMDGVVAVHELHIWAITVGKVLLACHVTITQDADADQMLDKVIGYIKS 404
+ D + L+N V AVHELHIW+ITVGKV LA V+I +AD D +LDKVI YIK
Sbjct: 482 KCDTSHLQNR------VTAVHELHIWSITVGKVSLASQVSIKPEADTDAILDKVIEYIKR 535
Query: 405 EYNISHVTIQIERE 418
HVTIQ+E+E
Sbjct: 536 H----HVTIQVEKE 545
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.322 0.135 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,805,502
Number of extensions: 241212
Number of successful extensions: 686
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 681
Number of HSP's successfully gapped: 12
Length of query: 418
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 317
Effective length of database: 8,337,553
Effective search space: 2643004301
Effective search space used: 2643004301
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 113 (48.1 bits)