Os05g0120700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter family protein.
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Os05g0120700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 79.15 | 0.418 | 12 | 0.789 | 2.42 | 1.69 | 0.166 | -0.662 | 0.0766 | 23.3 | 29.6 | 10 | 4.98 | 16 |
| 79.77 | 0.416 | 12 | 0.733 | 2.41 | 1.72 | 0.385 | -- | 0.0625 | 23.3 | 29.5 | 9 | 4.98 | 16.4 |
| 79.24 | 0.415 | 12 | 0.8 | 2.42 | 1.7 | -- | -0.771 | 0.08 | 23.4 | 29.59 | 9 | 4.98 | 16 |
| 80.4 | 0.418 | 12 | 0.72 | 2.41 | 1.74 | -- | -- | 0.064 | 23.3 | 29.5 | 9 | 4.98 | 16.6 |
| 381.12 | 0.909 | 12 | 0.583 | -- | 1.31 | -- | 0.84 | 0.0258 | -- | 24.82 | 3 | 3.99 | 19.8 |
| 129.71 | 0.534 | 12.1 | 0.459 | 2.07 | -- | 0.75 | -- | -0.111 | 23.4 | -- | -- | -- | -- |
| 132.13 | 0.538 | 12.1 | 0.429 | 2.07 | -- | -- | -- | -0.114 | 23.4 | -- | -- | -- | -- |
| 324.1 | 0.838 | 11.9 | 0.891 | -- | 1.9 | -- | -- | 0.22 | -- | 28.5 | 2 | 4.42 | 20.7 |
| 93.46 | 0.45 | 12 | -- | 2.38 | 1.57 | -- | -- | -0.0318 | 23.4 | 29.51 | 9 | 4.97 | 16.5 |
| 400.51 | 0.935 | 12 | 0.482 | -- | -- | -- | -- | -0.0931 | -- | -- | -- | -- | -- |
| 136.97 | 0.547 | 12.1 | -- | 2.07 | -- | -- | -- | -0.161 | 23.4 | -- | -- | -- | -- |
| 297.67 | 0.806 | 11.9 | -- | -- | 2.24 | -- | -- | 0.219 | -- | 30 | 2 | 3.92 | 24 |
| 406.64 | 0.941 | 12 | -- | -- | -- | -- | -- | -0.147 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 79.69 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 16 |
| 2 | 79.71 | temperature | 30 | 90 | < th | dose dependent | rect. | 4 | 15 |
| 25 | 85.22 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 19 |
| 26 | 85.53 | temperature | 25 | 90 | < th | dose independent | rect. | 4 | 15 |
| 28 | 85.82 | temperature | 10 | 270 | > th | dose dependent | rect. | 7 | 17 |
| 32 | 86.14 | temperature | 25 | 270 | < th | dose independent | rect. | 1 | 17 |
| 76 | 89.32 | temperature | 30 | 10 | < th | dose dependent | sin | 0 | NA |
| 82 | 89.75 | temperature | 15 | 270 | > th | dose dependent | rect. | 6 | 7 |
| 98 | 90.32 | temperature | 15 | 10 | > th | dose dependent | rect. | 8 | 18 |
| 111 | 90.85 | temperature | 20 | 10 | > th | dose dependent | sin | 1 | NA |
| 134 | 91.32 | temperature | 20 | 90 | > th | dose dependent | sin | 3 | NA |
| 169 | 91.94 | temperature | 15 | 10 | > th | dose dependent | rect. | 7 | 22 |
| 198 | 92.56 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 8 |
| 213 | 92.87 | temperature | 10 | 10 | > th | dose dependent | sin | 1 | NA |
| 224 | 93.08 | temperature | 25 | 90 | > th | dose independent | rect. | 7 | 8 |
| 243 | 93.42 | temperature | 25 | 90 | < th | dose independent | sin | 1 | NA |
| 251 | 93.54 | temperature | 10 | 90 | > th | dose dependent | sin | 2 | NA |
| 256 | 93.59 | temperature | 25 | 90 | > th | dose independent | sin | 2 | NA |
| 371 | 95.02 | humidity | 70 | 10 | > th | dose dependent | rect. | 5 | 16 |
| 376 | 95.10 | temperature | 25 | 270 | > th | dose independent | rect. | 2 | 11 |
| 380 | 95.15 | temperature | 25 | 270 | > th | dose independent | sin | 5 | NA |
| 387 | 95.23 | temperature | 20 | 90 | > th | dose dependent | rect. | 21 | 18 |
| 407 | 95.48 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 11 |
| 417 | 95.66 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 16 |
| 438 | 95.90 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 18 |
| 467 | 96.14 | radiation | 1 | 270 | < th | dose dependent | sin | 2 | NA |
| 470 | 96.19 | radiation | 1 | 270 | < th | dose independent | sin | 2 | NA |
| 474 | 96.22 | radiation | 1 | 270 | > th | dose independent | sin | 2 | NA |
| 593 | 97.31 | temperature | 20 | 10 | > th | dose dependent | rect. | 19 | 23 |
| 594 | 97.32 | radiation | 1 | 270 | < th | dose independent | rect. | 2 | 16 |
| 672 | 97.85 | radiation | 1 | 270 | < th | dose dependent | rect. | 3 | 15 |
| 710 | 98.11 | temperature | 10 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 717 | 98.17 | temperature | 20 | 90 | > th | dose dependent | rect. | 18 | 23 |
| 792 | 98.68 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 13 |
| 858 | 99.02 | temperature | 25 | 10 | > th | dose dependent | rect. | 19 | 20 |
| 955 | 99.61 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 964 | 99.66 | radiation | 1 | 270 | > th | dose independent | rect. | 17 | 22 |