Os05g0114700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Myb, DNA-binding domain containing protein.
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Os05g0114700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Myb, DNA-binding domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 112.29 | 0.498 | 10.9 | 0.255 | 1.81 | 1.32 | 0.678 | 1.01 | 0.326 | 6.35 | 17.66 | 5426 | -- | -- |
| 113.37 | 0.496 | 10.9 | 0.302 | 1.81 | 1.34 | 0.739 | -- | 0.331 | 6.34 | 17.66 | 5415 | -- | -- |
| 113.35 | 0.496 | 10.9 | 0.259 | 1.8 | 1.32 | -- | 1.13 | 0.322 | 6.33 | 17.6 | 5415 | -- | -- |
| 114.74 | 0.499 | 10.9 | 0.311 | 1.81 | 1.34 | -- | -- | 0.332 | 6.34 | 17.59 | 5415 | -- | -- |
| 152.86 | 0.576 | 10.9 | 0.543 | -- | 2.03 | -- | 1.45 | 0.446 | -- | 19.5 | 777 | -- | -- |
| 142.84 | 0.56 | 10.9 | 0.447 | 1.89 | -- | 0.681 | -- | 0.147 | 6.61 | -- | -- | -- | -- |
| 144 | 0.562 | 10.9 | 0.457 | 1.89 | -- | -- | -- | 0.145 | 6.59 | -- | -- | -- | -- |
| 151.24 | 0.573 | 10.9 | 0.684 | -- | 2.05 | -- | -- | 0.453 | -- | 17.5 | 750 | -- | -- |
| 117.38 | 0.505 | 10.9 | -- | 1.8 | 1.38 | -- | -- | 0.32 | 6.32 | 17.67 | 5415 | -- | -- |
| 330.77 | 0.85 | 11 | 0.503 | -- | -- | -- | -- | 0.184 | -- | -- | -- | -- | -- |
| 149.51 | 0.572 | 10.9 | -- | 1.9 | -- | -- | -- | 0.0942 | 6.57 | -- | -- | -- | -- |
| 145.85 | 0.562 | 10.9 | -- | -- | 2.42 | -- | -- | 0.508 | -- | 7.749 | 750 | -- | -- |
| 337.44 | 0.857 | 11 | -- | -- | -- | -- | -- | 0.128 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 103.98 | wind | 1.0 | 43200 | > th | dose independent | rect. | 2 | 4 |
| 2 | 104.21 | radiation | 10.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 3 | 104.30 | wind | 1.0 | 43200 | < th | dose independent | rect. | 2 | 4 |
| 17 | 104.71 | wind | 1.0 | 43200 | < th | dose independent | rect. | 4 | 2 |
| 20 | 104.99 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 13 | 4 |
| 21 | 105.04 | wind | 1.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 56 | 105.47 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 13 | 4 |
| 58 | 105.54 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 7 | 2 |
| 60 | 105.58 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 11 | 6 |
| 61 | 105.59 | wind | 3.0 | 14400 | > th | dose independent | rect. | 11 | 4 |
| 83 | 106.19 | radiation | 30.0 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 84 | 106.20 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 5 |
| 85 | 106.23 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 5 | 4 |
| 87 | 106.24 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 19 | 14 |
| 93 | 106.26 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 22 | 11 |
| 96 | 106.27 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 24 | 9 |
| 115 | 106.63 | wind | 1.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 116 | 106.64 | wind | 5.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 122 | 106.83 | wind | 5.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 125 | 106.85 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 131 | 107.00 | wind | 5.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 132 | 107.02 | wind | 3.0 | 14400 | < th | dose independent | rect. | 11 | 4 |
| 133 | 107.08 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 9 | 2 |
| 137 | 107.13 | wind | 5.0 | 14400 | < th | dose independent | rect. | 14 | 3 |
| 143 | 107.29 | wind | 3.0 | 14400 | > th | dose independent | rect. | 9 | 8 |
| 144 | 107.32 | radiation | 1.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 146 | 107.38 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 13 | 2 |
| 190 | 107.68 | humidity | 60.0 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 199 | 107.82 | radiation | 10.0 | 14400 | > th | dose dependent | rect. | 5 | 4 |
| 231 | 108.04 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 263 | 108.22 | temperature | 20.0 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 266 | 108.24 | wind | 5.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 270 | 108.26 | radiation | 30.0 | 14400 | < th | dose dependent | rect. | 20 | 13 |
| 274 | 108.27 | radiation | 30.0 | 14400 | < th | dose dependent | rect. | 22 | 11 |
| 278 | 108.28 | radiation | 30.0 | 14400 | < th | dose dependent | rect. | 24 | 9 |
| 287 | 108.35 | wind | 3.0 | 14400 | < th | dose independent | rect. | 9 | 8 |
| 312 | 108.43 | wind | 5.0 | 14400 | > th | dose independent | rect. | 14 | 3 |
| 364 | 108.61 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 365 | 108.62 | radiation | 40.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 424 | 108.83 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 10 | 6 |
| 449 | 108.88 | wind | 3.0 | 14400 | > th | dose independent | rect. | 9 | 12 |
| 459 | 108.92 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 461 | 108.92 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 482 | 108.98 | radiation | 40.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 493 | 109.02 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 497 | 109.02 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 15 | 1 |
| 498 | 109.03 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 8 | 10 |
| 550 | 109.13 | temperature | 30.0 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 559 | 109.15 | temperature | 25.0 | 43200 | > th | dose independent | sin | 2 | NA |
| 560 | 109.15 | wind | 5.0 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 580 | 109.17 | wind | 3.0 | 14400 | > th | dose independent | rect. | 11 | 10 |
| 586 | 109.19 | wind | 5.0 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 623 | 109.30 | temperature | 25.0 | 43200 | < th | dose independent | sin | 2 | NA |
| 666 | 109.40 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 8 | 14 |
| 700 | 109.47 | radiation | 10.0 | 43200 | > th | dose independent | sin | 21 | NA |
| 702 | 109.47 | wind | 3.0 | 14400 | < th | dose independent | rect. | 9 | 12 |
| 707 | 109.47 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 8 | 14 |
| 710 | 109.47 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 716 | 109.48 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 9 | 8 |
| 722 | 109.48 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 9 | 8 |
| 760 | 109.53 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 9 | 8 |
| 839 | 109.59 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 846 | 109.60 | radiation | 20.0 | 14400 | > th | dose independent | sin | 10 | NA |
| 852 | 109.61 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 11 | 6 |
| 854 | 109.61 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 2 |
| 903 | 109.69 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 9 | 7 |