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Os05g0108800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Cytochrome b5.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 14.8 (0.0168) R2 : 0.372
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.631 (0.0441) R2dC : 0.284 R2C : 0.265
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.275 (0.0354) R2dN8 : 0.107 R2N8 : 0.0887
σ : 0.317
deviance : 46.03
__
_____
C
peak time of C : 6.4
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
28.94 0.253 14.8 -0.209 0.626 1.03 0.272 -0.103 0.0941 6.56 0.3851 8626 -- --
28.87 0.25 14.8 -0.196 0.616 1.07 0.251 -- 0.0951 6.51 0.3901 8670 -- --
29.04 0.251 14.8 -0.223 0.633 1.03 -- -0.204 0.0917 6.41 0.39 8677 -- --
29.02 0.251 14.8 -0.19 0.617 1.08 -- -- 0.0931 6.36 0.39 8677 -- --
49.16 0.327 14.8 -0.151 -- 1.15 -- 0.215 0.0916 -- 0.42 8676 -- --
45.24 0.315 14.8 0.143 0.628 -- 0.298 -- 0.292 6.42 -- -- -- --
45.46 0.316 14.8 0.147 0.629 -- -- -- 0.291 6.41 -- -- -- --
49.16 0.327 14.8 -0.18 -- 1.1 -- -- 0.0931 -- 0.391 8677 -- --
29.84 0.254 14.8 -- 0.621 1.02 -- -- 0.0927 6.36 0.49 8679 -- --
66.01 0.38 14.8 0.163 -- -- -- -- 0.305 -- -- -- -- --
46.03 0.317 14.8 -- 0.631 -- -- -- 0.275 6.4 -- -- -- --
49.46 0.328 14.8 -- -- 1.05 -- -- 0.115 -- 0.8 8679 -- --
66.71 0.381 14.8 -- -- -- -- -- 0.287 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 27.36 radiation 1 14400 < th dose independent rect. 18 11
2 27.44 radiation 1 14400 > th dose independent rect. 18 1
12 27.51 radiation 1 14400 < th dose independent rect. 18 3
28 28.59 radiation 1 14400 < th dose dependent rect. 18 3
45 28.65 radiation 1 14400 < th dose dependent rect. 18 11
49 28.68 radiation 1 14400 < th dose dependent rect. 18 14
90 28.89 radiation 1 14400 < th dose dependent rect. 18 18
91 28.90 wind 9 43200 > th dose independent rect. 19 2
98 28.90 radiation 1 14400 > th dose independent rect. 17 15
105 28.94 radiation 1 14400 < th dose dependent rect. 4 2
116 29.00 radiation 1 14400 < th dose dependent sin 11 NA
120 29.00 temperature 10 270 > th dose dependent rect. 16 23
138 29.05 radiation 1 14400 < th dose independent rect. 17 19
140 29.06 radiation 30 4320 < th dose independent rect. 16 16
179 29.17 radiation 1 14400 > th dose independent rect. 17 19
185 29.19 humidity 90 14400 > th dose dependent rect. 21 6
187 29.19 humidity 90 14400 > th dose dependent rect. 18 10
193 29.21 wind 5 43200 < th dose independent rect. 5 16
194 29.21 wind 9 43200 > th dose dependent rect. 18 12
199 29.23 wind 9 43200 > th dose dependent rect. 18 7
207 29.25 wind 9 43200 < th dose independent rect. 19 2
213 29.27 wind 5 43200 > th dose independent rect. 5 16
214 29.27 wind 3 43200 > th dose dependent rect. 6 15
223 29.28 wind 9 43200 > th dose dependent rect. 18 5
239 29.30 temperature 10 1440 > th dose dependent rect. 16 18
252 29.32 wind 9 43200 > th dose independent rect. 18 7
261 29.33 wind 5 43200 < th dose independent rect. 9 16
276 29.34 temperature 30 1440 < th dose dependent rect. 16 18
277 29.35 wind 5 43200 < th dose independent sin 22 NA
281 29.35 wind 5 43200 < th dose independent rect. 11 20
283 29.35 wind 9 43200 > th dose dependent rect. 19 2
287 29.35 wind 3 43200 > th dose dependent rect. 9 16
302 29.36 wind 5 43200 < th dose independent rect. 11 16
303 29.36 wind 3 43200 > th dose dependent sin 23 NA
313 29.37 radiation 1 14400 < th dose independent sin 12 NA
317 29.37 wind 5 43200 < th dose independent rect. 6 19
321 29.37 humidity 90 14400 > th dose dependent sin 11 NA
328 29.38 wind 5 43200 < th dose independent rect. 6 11
351 29.39 wind 5 43200 > th dose independent sin 22 NA
357 29.39 wind 5 43200 > th dose independent rect. 9 16
373 29.40 wind 5 43200 > th dose independent rect. 11 16
381 29.40 humidity 90 14400 > th dose dependent rect. 22 4
410 29.41 wind 5 43200 > th dose independent rect. 11 20
413 29.41 wind 1 43200 > th dose dependent rect. 8 8
426 29.42 wind 5 43200 < th dose independent sin 17 NA
440 29.42 wind 3 43200 > th dose dependent rect. 7 10
450 29.42 radiation 1 14400 < th dose dependent rect. 6 23
451 29.43 wind 5 43200 > th dose independent sin 18 NA
471 29.43 wind 5 43200 < th dose independent rect. 24 21
476 29.43 wind 9 43200 < th dose dependent rect. 8 8
503 29.44 wind 5 43200 > th dose independent rect. 6 19
514 29.44 radiation 1 14400 < th dose dependent rect. 4 16
526 29.44 radiation 1 14400 < th dose dependent rect. 10 23
583 29.46 radiation 1 14400 < th dose dependent no NA NA
585 29.46 radiation 40 4320 < th dose dependent rect. 18 3
613 29.46 radiation 1 14400 < th dose dependent rect. 20 23
622 29.47 wind 5 43200 > th dose independent rect. 14 12
648 29.48 wind 9 43200 > th dose independent rect. 18 10
670 29.48 radiation 1 14400 < th dose dependent rect. 6 15
706 29.49 radiation 1 14400 < th dose dependent rect. 6 13
736 29.50 wind 5 43200 > th dose independent rect. 24 21
824 29.53 radiation 1 14400 > th dose independent sin 12 NA
856 29.53 radiation 1 14400 > th dose dependent rect. 18 11
873 29.54 wind 9 43200 < th dose independent rect. 18 7
890 29.54 temperature 30 1440 < th dose dependent rect. 4 5
924 29.55 temperature 10 1440 > th dose dependent rect. 4 6
957 29.56 humidity 90 14400 > th dose dependent rect. 21 14
985 29.57 wind 9 43200 < th dose dependent rect. 8 14