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Os05g0106100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Vacuolar ATP synthase 16 kDa proteolipid subunit (EC 3.6.3.14) (V- ATPase 16 kDa proteolipid subunit) (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.95 (0.0174) R2 : 0.6
β1 : -1.67 (0.0668) R2dD : 0.647 R2D : 0.38
β2 : -- (--) R2dC : -- R2C : --
β3 : 1.15 (0.0788) R2dE : 0.23 R2E : -0.0311
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.191 (0.0389) R2dN8 : 0.0323 R2N8 : -0.0652
σ : 0.32
deviance : 47.15
__
_____
C
peak time of C : --
E
wheather : temperature
threshold : -2.109
memory length : 1076
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
44.83 0.315 9.97 -1.84 0.371 1.35 -0.177 -1.07 -0.248 5.23 1.026 589 -- --
45.61 0.315 9.95 -1.66 0.369 1.33 -0.00456 -- -0.197 5.2 -1.025 592 -- --
44.9 0.312 9.97 -1.82 0.371 1.35 -- -0.978 -0.243 5.18 0.4629 587 -- --
45.61 0.315 9.95 -1.66 0.374 1.33 -- -- -0.198 5.18 -0.5627 588 -- --
46.4 0.317 9.98 -1.87 -- 1.16 -- -0.94 -0.244 -- 1.145 1081 -- --
66.54 0.382 9.91 -1.34 0.207 -- 0.019 -- 0.00261 0.797 -- -- -- --
66.54 0.382 9.91 -1.34 0.207 -- -- -- 0.00248 0.819 -- -- -- --
47.15 0.32 9.95 -1.67 -- 1.15 -- -- -0.191 -- -2.109 1076 -- --
109.69 0.488 9.89 -- 0.229 0.569 -- -- 0.0811 3.24 -23.98 516 -- --
69.21 0.389 9.91 -1.33 -- -- -- -- 0.0063 -- -- -- -- --
113.88 0.499 9.88 -- 0.186 -- -- -- 0.152 0.495 -- -- -- --
111.62 0.492 9.89 -- -- 0.499 -- -- 0.0903 -- -12.76 846 -- --
116.06 0.503 9.88 -- -- -- -- -- 0.154 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 43.64 radiation 10 14400 < th dose independent rect. 17 12
2 43.67 wind 9 43200 > th dose independent rect. 20 4
4 43.70 wind 9 43200 < th dose independent rect. 20 4
5 43.70 radiation 10 14400 < th dose independent rect. 17 7
6 43.71 radiation 10 14400 < th dose independent rect. 17 3
7 43.71 radiation 10 14400 < th dose independent rect. 17 5
8 43.71 radiation 10 14400 < th dose independent rect. 17 9
15 43.81 wind 9 43200 > th dose independent rect. 20 7
17 43.88 wind 9 43200 < th dose independent rect. 20 7
24 44.18 temperature 10 720 > th dose dependent rect. 19 20
25 44.18 temperature 10 720 > th dose dependent rect. 19 22
30 44.27 temperature 10 720 > th dose dependent rect. 10 23
33 44.43 temperature 10 720 > th dose dependent rect. 1 23
37 44.52 temperature 10 720 > th dose dependent rect. 19 18
39 44.55 wind 9 43200 > th dose dependent rect. 17 14
41 44.57 wind 7 43200 > th dose dependent rect. 20 7
49 44.63 wind 7 43200 > th dose dependent rect. 20 5
51 44.66 temperature 10 720 > th dose dependent rect. 12 23
69 44.90 temperature 15 720 > th dose dependent rect. 12 21
86 45.05 temperature 10 720 > th dose dependent rect. 23 23
93 45.14 temperature 15 720 > th dose dependent rect. 14 23
95 45.15 temperature 10 720 > th dose dependent rect. 12 19
96 45.15 temperature 10 720 > th dose dependent rect. 8 23
108 45.22 temperature 30 720 < th dose dependent rect. 15 20
111 45.24 wind 9 43200 < th dose independent rect. 17 15
112 45.24 temperature 10 720 > th dose dependent no NA NA
121 45.29 radiation 10 14400 > th dose dependent rect. 17 13
126 45.34 wind 9 43200 > th dose dependent rect. 17 7
141 45.40 wind 9 43200 > th dose independent rect. 17 15
150 45.44 temperature 25 720 < th dose dependent rect. 12 22
159 45.47 temperature 25 720 < th dose dependent rect. 1 23
173 45.51 temperature 25 720 < th dose dependent rect. 21 23
182 45.55 temperature 25 720 < th dose dependent no NA NA
187 45.56 temperature 25 720 < th dose dependent rect. 17 23
194 45.57 temperature 25 720 < th dose dependent rect. 8 23
205 45.61 radiation 10 14400 > th dose dependent rect. 17 1
221 45.62 temperature 25 720 < th dose dependent rect. 6 23
392 46.08 temperature 15 720 > th dose dependent rect. 14 19
513 46.42 wind 9 43200 < th dose independent sin 11 NA
526 46.44 wind 9 43200 > th dose independent rect. 17 12
533 46.46 humidity 60 14400 > th dose independent rect. 18 14
550 46.50 radiation 20 4320 < th dose independent rect. 16 15
559 46.52 temperature 10 720 > th dose dependent sin 10 NA
573 46.57 wind 9 43200 > th dose independent sin 11 NA
574 46.57 wind 9 43200 < th dose independent rect. 17 11
602 46.64 humidity 60 14400 > th dose independent rect. 18 11
623 46.68 humidity 60 14400 < th dose independent rect. 18 14
635 46.71 humidity 60 14400 > th dose independent rect. 18 6
644 46.72 humidity 60 14400 > th dose independent rect. 18 8
659 46.74 humidity 60 14400 > th dose independent rect. 18 4
661 46.74 temperature 30 1440 < th dose dependent rect. 17 7
690 46.78 temperature 30 1440 < th dose dependent rect. 18 1
702 46.79 temperature 10 1440 > th dose dependent sin 14 NA
713 46.80 temperature 30 1440 < th dose dependent rect. 17 9
739 46.82 radiation 30 4320 < th dose independent rect. 15 17
775 46.86 temperature 30 720 < th dose dependent sin 10 NA
776 46.86 temperature 10 1440 > th dose dependent rect. 17 7
791 46.87 temperature 10 1440 > th dose dependent rect. 17 9
805 46.88 wind 7 43200 > th dose dependent sin 11 NA
857 46.92 humidity 60 14400 < th dose independent rect. 18 4
866 46.92 temperature 30 1440 < th dose dependent sin 13 NA
895 46.94 temperature 10 720 > th dose dependent rect. 1 16
936 46.97 wind 9 43200 > th dose independent rect. 17 7
964 46.99 wind 7 43200 < th dose independent rect. 8 1
973 46.99 radiation 30 4320 > th dose dependent rect. 15 17