BLAST Search Results

BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os05g0106100 Os05g0106100|AK063178
         (166 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G19910.1  | chr1:6913317-6914322 FORWARD LENGTH=166            251   1e-67
AT4G34720.1  | chr4:16568223-16569165 REVERSE LENGTH=165          251   1e-67
AT4G38920.1  | chr4:18147330-18148853 FORWARD LENGTH=165          251   1e-67
AT2G16510.1  | chr2:7160007-7160811 REVERSE LENGTH=165            251   1e-67
AT1G75630.2  | chr1:28400662-28402032 FORWARD LENGTH=201          234   1e-62
AT2G25610.1  | chr2:10901585-10902494 REVERSE LENGTH=179           58   3e-09

>AT1G19910.1 | chr1:6913317-6914322 FORWARD LENGTH=166
          Length = 165

 Score =  251 bits (641), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 132/164 (80%), Positives = 136/164 (82%)

Query: 3   SSTFSGDETAPFFGFLGAASALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM 62
           +STFSGDETAPFFGFLGAA+ALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM
Sbjct: 2   ASTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM 61

Query: 63  AGVLGIYGLIIAVIISTGINPKAKPYFLFDGYAHXXXXXXXXXXXXXXXMAIGIVGDAGV 122
           AGVLGIYGLIIAVIISTGINPKAK Y+LFDGYAH               MAIGIVGDAGV
Sbjct: 62  AGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGV 121

Query: 123 RANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 166
           RANAQQPKLFVGM            YGLIVGIILSSRAGQSRA+
Sbjct: 122 RANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 165



>AT4G34720.1 | chr4:16568223-16569165 REVERSE LENGTH=165
          Length = 164

 Score =  251 bits (641), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 132/163 (80%), Positives = 135/163 (82%)

Query: 4   STFSGDETAPFFGFLGAASALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMA 63
           STFSGDETAPFFGFLGAA+ALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMA
Sbjct: 2   STFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMA 61

Query: 64  GVLGIYGLIIAVIISTGINPKAKPYFLFDGYAHXXXXXXXXXXXXXXXMAIGIVGDAGVR 123
           GVLGIYGLIIAVIISTGINPKAK Y+LFDGYAH               MAIGIVGDAGVR
Sbjct: 62  GVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR 121

Query: 124 ANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 166
           ANAQQPKLFVGM            YGLIVGIILSSRAGQSRA+
Sbjct: 122 ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 164



>AT4G38920.1 | chr4:18147330-18148853 FORWARD LENGTH=165
          Length = 164

 Score =  251 bits (641), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 132/163 (80%), Positives = 135/163 (82%)

Query: 4   STFSGDETAPFFGFLGAASALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMA 63
           STFSGDETAPFFGFLGAA+ALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMA
Sbjct: 2   STFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMA 61

Query: 64  GVLGIYGLIIAVIISTGINPKAKPYFLFDGYAHXXXXXXXXXXXXXXXMAIGIVGDAGVR 123
           GVLGIYGLIIAVIISTGINPKAK Y+LFDGYAH               MAIGIVGDAGVR
Sbjct: 62  GVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR 121

Query: 124 ANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 166
           ANAQQPKLFVGM            YGLIVGIILSSRAGQSRA+
Sbjct: 122 ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 164



>AT2G16510.1 | chr2:7160007-7160811 REVERSE LENGTH=165
          Length = 164

 Score =  251 bits (641), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 132/163 (80%), Positives = 135/163 (82%)

Query: 4   STFSGDETAPFFGFLGAASALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMA 63
           STFSGDETAPFFGFLGAA+ALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMA
Sbjct: 2   STFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMA 61

Query: 64  GVLGIYGLIIAVIISTGINPKAKPYFLFDGYAHXXXXXXXXXXXXXXXMAIGIVGDAGVR 123
           GVLGIYGLIIAVIISTGINPKAK Y+LFDGYAH               MAIGIVGDAGVR
Sbjct: 62  GVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR 121

Query: 124 ANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 166
           ANAQQPKLFVGM            YGLIVGIILSSRAGQSRA+
Sbjct: 122 ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 164



>AT1G75630.2 | chr1:28400662-28402032 FORWARD LENGTH=201
          Length = 200

 Score =  234 bits (598), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 133/200 (66%), Positives = 137/200 (68%), Gaps = 34/200 (17%)

Query: 1   MSSSTFSGDETAPFFGFLGAASALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPV 60
           M+SS FSGDETAPFFGFLGAA+ALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPV
Sbjct: 1   MASSGFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPV 60

Query: 61  VMAGVLGIYGLIIAVIISTGINPKAKPYFLFDGYAHXXXXXXXXXXXXXXXMAIGIVGDA 120
           VMAGVLGIYGLIIAVIISTGINPKAK Y+LFDGYAH               MAIGIVGDA
Sbjct: 61  VMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDA 120

Query: 121 GVR----------------------------------ANAQQPKLFVGMXXXXXXXXXXX 146
           GVR                                  ANAQQPKLFVGM           
Sbjct: 121 GVRVVDCNPDSKIKIYSFTTSFLSNLSQKELFIDLLSANAQQPKLFVGMILILIFAEALA 180

Query: 147 XYGLIVGIILSSRAGQSRAD 166
            YGLIVGIILSSRAGQSRA+
Sbjct: 181 LYGLIVGIILSSRAGQSRAE 200



>AT2G25610.1 | chr2:10901585-10902494 REVERSE LENGTH=179
          Length = 178

 Score = 57.8 bits (138), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 77/155 (49%), Gaps = 6/155 (3%)

Query: 12  APF-FGFLGAASALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYG 70
           +P+ F  +G A ++  S +GAA+G   +G  +    +  P +  K+++ V+    + IYG
Sbjct: 19  SPYTFSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIEAPRITSKNLISVIFCEAVAIYG 78

Query: 71  LIIAVIISTGIN--PKAKPY---FLFDGYAHXXXXXXXXXXXXXXXMAIGIVGDAGVRAN 125
           +I+A+I+ T +   P +K Y    L  GYA                + +GI+G +   ++
Sbjct: 79  VIVAIILQTKLESVPSSKMYDAESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSD 138

Query: 126 AQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRA 160
           AQ   LFV +            +G+IVGII+S++A
Sbjct: 139 AQNSTLFVKILVIEIFGSALGLFGVIVGIIMSAQA 173



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.324    0.139    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,592,301
Number of extensions: 81785
Number of successful extensions: 180
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 167
Number of HSP's successfully gapped: 7
Length of query: 166
Length of database: 11,106,569
Length adjustment: 91
Effective length of query: 75
Effective length of database: 8,611,713
Effective search space: 645878475
Effective search space used: 645878475
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 108 (46.2 bits)