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Os05g0103400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.63 (0.0233) R2 : 0.562
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.33 (0.0555) R2dC : 0.556 R2C : 0.55
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.155 (0.049) R2dN8 : 0.0124 R2N8 : 0.00652
σ : 0.439
deviance : 88.05
__
_____
C
peak time of C : 0.587
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
70.27 0.394 9.63 0.029 0.991 0.422 -1.21 -0.453 -0.16 0.45 19.98 14 -- --
70.92 0.392 9.62 0.0538 0.945 0.426 -1.47 -- -0.167 0.435 19.98 13 -- --
74.35 0.402 9.62 0.108 0.972 0.404 -- -0.837 -0.117 0.894 19.92 15 -- --
81.28 0.42 9.61 0.101 0.995 0.418 -- -- -0.144 0.673 19.98 15 -- --
84.93 0.429 9.59 0.0555 -- 1.07 -- -1.29 -0.0343 -- 8.29 54 -- --
77.48 0.413 9.63 0.0391 1.33 -- -1.56 -- -0.15 0.43 -- -- -- --
87.79 0.439 9.63 0.0977 1.33 -- -- -- -0.144 0.583 -- -- -- --
96.31 0.457 9.58 0.107 -- 1.02 -- -- -0.0675 -- 8.63 46 -- --
81.57 0.421 9.61 -- 0.999 0.418 -- -- -0.149 0.689 19.97 15 -- --
199.05 0.659 9.6 0.144 -- -- -- -- -0.121 -- -- -- -- --
88.05 0.439 9.63 -- 1.33 -- -- -- -0.155 0.587 -- -- -- --
96.09 0.457 9.59 -- -- 1.03 -- -- -0.0983 -- 8.63 45 -- --
199.6 0.659 9.6 -- -- -- -- -- -0.137 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 65.36 precipitation 0.1 270 < th dose independent rect. 15 15
2 65.36 precipitation 0.1 270 < th dose dependent rect. 15 15
5 65.83 radiation 30.0 270 < th dose independent rect. 1 8
8 66.02 temperature 10.0 270 > th dose dependent rect. 1 8
10 66.05 humidity 60.0 270 > th dose dependent rect. 18 8
16 66.27 precipitation 0.1 270 < th dose independent rect. 13 8
17 66.27 precipitation 0.1 270 < th dose dependent rect. 13 8
18 66.40 wind 1.0 270 > th dose independent rect. 13 8
21 66.48 humidity 70.0 270 > th dose independent rect. 1 8
25 66.56 radiation 30.0 10 < th dose independent rect. 2 9
31 66.62 radiation 40.0 270 < th dose dependent rect. 1 8
34 66.67 humidity 50.0 270 > th dose independent rect. 9 16
35 66.68 humidity 50.0 270 > th dose independent rect. 21 16
36 66.70 temperature 10.0 270 > th dose independent rect. 13 8
37 66.70 temperature 10.0 270 > th dose independent rect. 21 16
38 66.70 atmosphere 995.0 270 > th dose independent rect. 21 16
40 66.73 radiation 20.0 10 < th dose independent rect. 4 16
44 66.75 radiation 40.0 90 < th dose dependent rect. 15 18
51 66.85 wind 1.0 270 > th dose independent rect. 15 15
53 66.88 wind 9.0 270 < th dose independent rect. 13 8
57 66.91 precipitation 0.1 270 < th dose independent rect. 21 16
58 66.91 precipitation 0.1 270 < th dose dependent rect. 21 16
59 66.93 atmosphere 1015.0 270 < th dose independent rect. 13 8
62 66.96 humidity 50.0 270 > th dose independent rect. 6 9
66 66.99 atmosphere 1000.0 270 > th dose independent rect. 18 8
67 66.99 precipitation 0.1 270 < th dose independent rect. 1 8
68 66.99 radiation 40.0 270 < th dose independent rect. 15 15
69 66.99 precipitation 0.1 270 < th dose dependent rect. 1 8
72 67.03 temperature 30.0 270 < th dose independent rect. 1 8
74 67.04 radiation 40.0 10 < th dose dependent rect. 4 16
76 67.05 temperature 10.0 270 > th dose independent rect. 6 9
77 67.05 atmosphere 1015.0 270 < th dose independent rect. 6 9
78 67.05 precipitation 0.1 270 < th dose independent rect. 6 9
79 67.05 temperature 10.0 270 > th dose independent rect. 15 15
81 67.05 precipitation 0.1 270 < th dose dependent rect. 6 9
82 67.06 radiation 30.0 90 < th dose independent rect. 3 17
90 67.09 wind 9.0 270 < th dose independent rect. 15 15
92 67.10 wind 9.0 270 < th dose independent rect. 21 16
93 67.10 radiation 20.0 10 < th dose independent rect. 4 18
95 67.11 wind 7.0 270 < th dose independent rect. 1 8
103 67.14 radiation 40.0 90 < th dose dependent rect. 3 8
116 67.23 atmosphere 1000.0 10 > th dose independent rect. 20 8
117 67.23 atmosphere 995.0 270 > th dose independent rect. 6 9
118 67.24 atmosphere 995.0 270 > th dose independent rect. 13 8
127 67.28 radiation 20.0 10 < th dose independent rect. 16 18
132 67.31 radiation 20.0 90 < th dose independent rect. 15 18
141 67.34 atmosphere 1015.0 270 < th dose dependent rect. 13 8
149 67.39 temperature 10.0 270 > th dose independent rect. 1 8
151 67.39 humidity 50.0 270 > th dose independent rect. 1 8
152 67.39 atmosphere 995.0 270 > th dose independent rect. 1 8
153 67.39 atmosphere 1015.0 270 < th dose independent rect. 1 8
155 67.39 temperature 10.0 270 > th dose independent rect. 9 16
172 67.48 radiation 40.0 10 < th dose dependent rect. 3 8
174 67.48 radiation 40.0 90 < th dose dependent rect. 3 17
191 67.53 wind 9.0 270 < th dose independent rect. 6 9
203 67.54 temperature 30.0 720 < th dose independent rect. 16 16
217 67.59 radiation 30.0 10 < th dose dependent rect. 16 17
231 67.63 wind 9.0 270 < th dose independent rect. 9 16
240 67.66 humidity 70.0 270 > th dose independent rect. 18 8
244 67.66 radiation 30.0 10 < th dose dependent rect. 4 18
259 67.72 wind 1.0 270 > th dose independent rect. 1 7
284 67.76 radiation 40.0 90 < th dose dependent rect. 15 20
322 67.87 atmosphere 1015.0 270 < th dose independent rect. 21 16
329 67.89 precipitation 0.1 30 < th dose independent rect. 16 17
332 67.89 precipitation 0.1 30 < th dose dependent rect. 16 17
357 67.95 radiation 40.0 10 < th dose dependent rect. 16 19
358 67.96 wind 5.0 10 < th dose independent rect. 3 6
360 67.96 wind 9.0 90 < th dose dependent rect. 2 7
366 67.98 radiation 20.0 10 < th dose independent rect. 14 20
381 68.01 temperature 30.0 720 < th dose independent sin 12 NA
403 68.04 radiation 40.0 270 < th dose independent rect. 13 7
410 68.06 temperature 20.0 270 > th dose independent rect. 2 6
415 68.07 atmosphere 1000.0 270 > th dose independent rect. 18 21
431 68.10 temperature 30.0 720 < th dose independent rect. 17 9
438 68.11 precipitation 0.1 90 < th dose independent rect. 3 17
439 68.11 temperature 10.0 270 > th dose dependent rect. 14 6
442 68.11 precipitation 0.1 90 < th dose dependent rect. 3 17
466 68.15 humidity 50.0 270 > th dose dependent rect. 1 8
467 68.16 atmosphere 995.0 270 > th dose independent rect. 9 16
475 68.18 precipitation 0.1 10 < th dose independent rect. 3 6
478 68.18 precipitation 0.1 10 < th dose dependent rect. 3 6
491 68.19 wind 9.0 10 < th dose dependent rect. 3 6
500 68.20 humidity 50.0 10 > th dose dependent rect. 20 8
566 68.29 humidity 70.0 10 > th dose dependent rect. 18 9
567 68.30 radiation 1.0 10 > th dose independent rect. 9 7
576 68.32 temperature 30.0 720 < th dose independent rect. 15 4
580 68.33 precipitation 0.1 270 < th dose independent rect. 15 3
583 68.33 precipitation 0.1 270 < th dose dependent rect. 15 3
586 68.33 radiation 40.0 10 < th dose dependent rect. 14 19
592 68.34 radiation 1.0 270 < th dose dependent rect. 18 8
620 68.37 atmosphere 995.0 270 > th dose independent rect. 15 15
631 68.38 atmosphere 1015.0 10 < th dose dependent rect. 16 6
643 68.39 radiation 40.0 10 < th dose dependent rect. 14 21
650 68.40 radiation 30.0 90 < th dose independent rect. 13 22
653 68.40 radiation 40.0 90 < th dose dependent rect. 13 22
661 68.42 wind 1.0 270 > th dose independent rect. 15 3
670 68.43 radiation 30.0 10 < th dose dependent rect. 6 14
671 68.44 radiation 40.0 270 < th dose independent rect. 15 3
673 68.44 radiation 1.0 270 > th dose independent rect. 7 8
675 68.44 atmosphere 1015.0 270 < th dose dependent rect. 15 4
690 68.46 radiation 20.0 10 < th dose independent rect. 6 14
692 68.46 radiation 20.0 10 < th dose independent rect. 6 16
697 68.46 humidity 90.0 720 < th dose dependent rect. 16 8
703 68.48 temperature 10.0 270 > th dose independent rect. 15 3
705 68.48 atmosphere 1010.0 270 < th dose independent rect. 15 3
713 68.48 temperature 10.0 270 > th dose independent rect. 18 21
728 68.51 precipitation 0.1 270 < th dose independent rect. 23 23
730 68.51 temperature 25.0 720 < th dose dependent rect. 22 8
732 68.51 precipitation 0.1 270 < th dose dependent rect. 23 23
738 68.52 humidity 80.0 720 < th dose dependent rect. 16 11
759 68.54 humidity 50.0 270 > th dose independent rect. 18 21
770 68.55 radiation 1.0 270 < th dose independent rect. 18 8
773 68.55 temperature 10.0 270 > th dose dependent rect. 2 18
805 68.59 radiation 20.0 10 < th dose independent rect. 23 23
816 68.61 humidity 50.0 90 > th dose dependent rect. 3 8
822 68.62 temperature 10.0 270 > th dose dependent rect. 15 3
834 68.63 temperature 10.0 1440 > th dose independent rect. 3 7
837 68.63 atmosphere 995.0 1440 > th dose independent rect. 3 7
838 68.63 temperature 10.0 1440 > th dose independent rect. 10 17
849 68.64 wind 9.0 270 < th dose independent rect. 15 3
936 68.70 temperature 30.0 720 < th dose independent rect. 13 8
941 68.70 radiation 30.0 10 < th dose dependent rect. 6 16
955 68.71 precipitation 0.1 270 < th dose independent rect. 18 21
962 68.71 precipitation 0.1 270 < th dose dependent rect. 18 21
987 68.73 atmosphere 995.0 270 > th dose independent rect. 15 3
994 68.73 humidity 50.0 90 > th dose dependent rect. 3 6