Os04g0689500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os04g0689500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 548.86 | 1.1 | 9 | -2.11 | 2.23 | 1.85 | 1.71 | 3.44 | -0.6 | 8.48 | 74.01 | 947 | 6.4 | -- |
| 559.4 | 1.1 | 9.06 | -2.32 | 2.25 | 2.05 | 1.44 | -- | -0.631 | 8.54 | 74.51 | 995 | 6.97 | -- |
| 557.23 | 1.1 | 9.01 | -2.17 | 2.24 | 1.95 | -- | 2.52 | -0.584 | 8.63 | 74 | 970 | 6.72 | -- |
| 562.18 | 1.1 | 9.04 | -2.33 | 2.26 | 2.11 | -- | -- | -0.615 | 8.73 | 75 | 979 | 6.94 | -- |
| 640.51 | 1.18 | 9.21 | -1.95 | -- | 3.15 | -- | 1.88 | -0.882 | -- | 204.5 | 1280 | 8.98 | -- |
| 695.43 | 1.24 | 9.1 | -2.1 | 2.1 | -- | 1.86 | -- | -0.863 | 7.47 | -- | -- | -- | -- |
| 704.51 | 1.24 | 9.1 | -2.06 | 2.1 | -- | -- | -- | -0.864 | 7.63 | -- | -- | -- | -- |
| 641.69 | 1.18 | 9.17 | -1.99 | -- | 3.25 | -- | -- | -0.896 | -- | 367.8 | 1363 | 9.72 | -- |
| 703.43 | 1.24 | 9 | -- | 2.2 | 1.9 | -- | -- | -0.386 | 8.75 | 75.01 | 989 | 6.89 | -- |
| 941.48 | 1.43 | 9.15 | -2.03 | -- | -- | -- | -- | -0.833 | -- | -- | -- | -- | -- |
| 815.87 | 1.34 | 9.05 | -- | 2.08 | -- | -- | -- | -0.636 | 7.7 | -- | -- | -- | -- |
| 748.19 | 1.27 | 9.12 | -- | -- | 3.3 | -- | -- | -0.687 | -- | 375.6 | 1371 | 9.59 | -- |
| 1049.81 | 1.51 | 9.1 | -- | -- | -- | -- | -- | -0.608 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 552.72 | humidity | 70 | 720 | < th | dose independent | rect. | 17 | 3 |
| 14 | 556.58 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 9 |
| 31 | 560.62 | humidity | 70 | 720 | < th | dose dependent | rect. | 18 | 1 |
| 52 | 564.44 | temperature | 30 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 85 | 567.98 | humidity | 70 | 720 | > th | dose independent | sin | 13 | NA |
| 102 | 568.87 | humidity | 70 | 720 | < th | dose independent | sin | 12 | NA |
| 103 | 569.07 | temperature | 30 | 720 | > th | dose independent | rect. | 18 | 1 |
| 118 | 569.26 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 14 |
| 158 | 571.33 | temperature | 30 | 720 | < th | dose independent | rect. | 17 | 9 |
| 205 | 573.15 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 4 |
| 212 | 574.17 | humidity | 70 | 1440 | < th | dose dependent | sin | 12 | NA |
| 236 | 575.27 | humidity | 60 | 1440 | > th | dose independent | rect. | 14 | 15 |
| 251 | 575.54 | humidity | 60 | 1440 | < th | dose independent | rect. | 14 | 5 |
| 305 | 576.99 | humidity | 50 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 306 | 577.02 | humidity | 50 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 324 | 577.39 | radiation | 1 | 720 | > th | dose dependent | rect. | 18 | 11 |
| 326 | 577.48 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 374 | 578.24 | radiation | 1 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 483 | 581.15 | radiation | 1 | 720 | > th | dose independent | rect. | 18 | 11 |
| 603 | 583.41 | radiation | 1 | 720 | > th | dose independent | rect. | 18 | 1 |
| 706 | 585.12 | temperature | 30 | 720 | < th | dose independent | sin | 12 | NA |
| 746 | 585.59 | radiation | 1 | 270 | < th | dose dependent | rect. | 5 | 21 |
| 774 | 586.13 | temperature | 30 | 720 | < th | dose independent | rect. | 16 | 15 |
| 895 | 588.32 | temperature | 30 | 1440 | > th | dose dependent | sin | 12 | NA |