Os04g0679100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Clathrin light chain family protein.
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Os04g0679100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Clathrin light chain family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 44.99 | 0.315 | 10.3 | -0.0162 | 0.726 | 0.88 | 0.256 | 0.259 | -0.256 | 9.46 | 25.78 | 169 | -- | -- |
| 45.08 | 0.313 | 10.3 | 0.0274 | 0.72 | 0.859 | 0.224 | -- | -0.247 | 9.45 | 25.9 | 177 | -- | -- |
| 45.21 | 0.313 | 10.3 | 0.00326 | 0.723 | 0.869 | -- | 0.193 | -0.255 | 9.41 | 25.8 | 176 | -- | -- |
| 45.26 | 0.313 | 10.3 | 0.0337 | 0.722 | 0.854 | -- | -- | -0.249 | 9.41 | 25.85 | 176 | -- | -- |
| 67.79 | 0.383 | 10.3 | 0.0241 | -- | 1.02 | -- | 0.256 | -0.229 | -- | 28.42 | 578 | -- | -- |
| 55.77 | 0.35 | 10.4 | -0.188 | 0.736 | -- | 0.166 | -- | -0.431 | 8.52 | -- | -- | -- | -- |
| 55.86 | 0.35 | 10.4 | -0.183 | 0.736 | -- | -- | -- | -0.431 | 8.49 | -- | -- | -- | -- |
| 67.76 | 0.383 | 10.3 | 0.101 | -- | 1.04 | -- | -- | -0.205 | -- | 28.5 | 573 | -- | -- |
| 45.29 | 0.313 | 10.3 | -- | 0.72 | 0.842 | -- | -- | -0.253 | 9.4 | 25.86 | 176 | -- | -- |
| 86.17 | 0.434 | 10.4 | -0.18 | -- | -- | -- | -- | -0.424 | -- | -- | -- | -- | -- |
| 56.74 | 0.352 | 10.4 | -- | 0.735 | -- | -- | -- | -0.41 | 8.51 | -- | -- | -- | -- |
| 67.98 | 0.384 | 10.3 | -- | -- | 0.997 | -- | -- | -0.223 | -- | 28.5 | 567 | -- | -- |
| 87.02 | 0.435 | 10.4 | -- | -- | -- | -- | -- | -0.404 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 40.57 | temperature | 20.0 | 270 | > th | dose independent | rect. | 7 | 20 |
| 2 | 40.97 | temperature | 20.0 | 270 | > th | dose independent | rect. | 8 | 18 |
| 4 | 41.17 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 19 | 8 |
| 11 | 41.61 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 9 | 19 |
| 14 | 41.84 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 9 | 20 |
| 38 | 42.69 | temperature | 20.0 | 270 | > th | dose independent | rect. | 19 | 8 |
| 44 | 42.80 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 7 | 20 |
| 55 | 43.05 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 20 | 16 |
| 88 | 43.80 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 15 | 16 |
| 118 | 44.29 | temperature | 20.0 | 270 | > th | dose independent | rect. | 20 | 17 |
| 128 | 44.38 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 10 | 21 |
| 200 | 44.99 | temperature | 25.0 | 270 | < th | dose independent | rect. | 11 | 21 |
| 326 | 45.49 | temperature | 25.0 | 270 | < th | dose independent | rect. | 13 | 19 |
| 356 | 45.57 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 397 | 45.75 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 412 | 45.81 | temperature | 25.0 | 90 | < th | dose dependent | no | NA | NA |
| 440 | 45.89 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 9 | 13 |
| 444 | 45.90 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 9 | 20 |
| 449 | 45.91 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 20 |
| 477 | 45.96 | wind | 9.0 | 90 | < th | dose dependent | rect. | 9 | 20 |
| 517 | 46.05 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 17 | 23 |
| 536 | 46.10 | wind | 5.0 | 90 | < th | dose independent | rect. | 9 | 20 |
| 550 | 46.13 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 566 | 46.18 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 611 | 46.29 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 15 | 7 |
| 622 | 46.31 | wind | 9.0 | 270 | < th | dose dependent | rect. | 7 | 20 |
| 634 | 46.34 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 3 | 5 |
| 638 | 46.35 | wind | 1.0 | 43200 | > th | dose independent | rect. | 4 | 3 |
| 649 | 46.38 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 17 | 4 |
| 660 | 46.40 | radiation | 30.0 | 90 | < th | dose independent | rect. | 5 | 4 |
| 667 | 46.41 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 3 | 5 |
| 669 | 46.41 | temperature | 25.0 | 720 | < th | dose dependent | sin | 20 | NA |
| 676 | 46.41 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 19 | 23 |
| 697 | 46.45 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 9 | 20 |
| 704 | 46.46 | wind | 1.0 | 270 | > th | dose independent | rect. | 4 | 2 |
| 708 | 46.46 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 711 | 46.46 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 713 | 46.47 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 3 | 5 |
| 715 | 46.47 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 3 | 5 |
| 774 | 46.56 | temperature | 30.0 | 90 | < th | dose independent | rect. | 5 | 4 |
| 813 | 46.62 | radiation | 10.0 | 30 | < th | dose dependent | sin | 11 | NA |
| 830 | 46.66 | humidity | 70.0 | 43200 | < th | dose dependent | sin | 6 | NA |
| 857 | 46.70 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 1 | 12 |
| 862 | 46.71 | temperature | 25.0 | 720 | > th | dose independent | rect. | 16 | 3 |
| 863 | 46.71 | wind | 5.0 | 270 | < th | dose independent | rect. | 7 | 20 |
| 864 | 46.71 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 20 |
| 867 | 46.71 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 3 | 10 |
| 875 | 46.72 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 8 | 5 |
| 877 | 46.72 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 5 | 18 |
| 881 | 46.73 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 20 |
| 887 | 46.73 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 20 |
| 889 | 46.74 | wind | 5.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 890 | 46.74 | wind | 1.0 | 270 | > th | dose independent | rect. | 13 | 18 |
| 934 | 46.77 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 9 | 7 |
| 937 | 46.78 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 4 |
| 938 | 46.78 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 4 |
| 949 | 46.79 | wind | 5.0 | 90 | < th | dose independent | rect. | 5 | 4 |
| 951 | 46.79 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 5 | 4 |
| 956 | 46.79 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 5 | 4 |
| 965 | 46.80 | humidity | 60.0 | 90 | > th | dose independent | rect. | 5 | 4 |
| 969 | 46.81 | wind | 9.0 | 90 | < th | dose independent | rect. | 5 | 4 |
| 970 | 46.81 | temperature | 10.0 | 90 | > th | dose independent | rect. | 5 | 4 |
| 973 | 46.81 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 5 | 4 |
| 974 | 46.81 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 5 | 4 |
| 990 | 46.83 | wind | 5.0 | 270 | < th | dose independent | rect. | 17 | 10 |