Os04g0667000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Tafazzin family protein.
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Os04g0667000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Tafazzin family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 39.85 | 0.297 | 10.4 | -0.692 | 0.69 | -0.753 | -0.216 | 0.824 | -0.0386 | 23.4 | 28.25 | 123 | -- | -- |
| 40.59 | 0.297 | 10.4 | -0.543 | 0.679 | -0.752 | -0.0635 | -- | -0.0029 | 23.3 | 27.31 | 138 | -- | -- |
| 40 | 0.295 | 10.4 | -0.678 | 0.677 | -0.774 | -- | 0.68 | -0.033 | 23.5 | 28.12 | 142 | -- | -- |
| 40.53 | 0.297 | 10.4 | -0.545 | 0.657 | -0.76 | -- | -- | -0.00421 | 23.3 | 27.15 | 176 | -- | -- |
| 54.86 | 0.345 | 10.4 | -0.809 | -- | -0.884 | -- | 1.12 | -0.07 | -- | 29.09 | 783 | -- | -- |
| 48.98 | 0.328 | 10.4 | -0.349 | 0.592 | -- | -0.0531 | -- | 0.161 | 22.2 | -- | -- | -- | -- |
| 48.99 | 0.328 | 10.4 | -0.347 | 0.593 | -- | -- | -- | 0.161 | 22.2 | -- | -- | -- | -- |
| 55.91 | 0.348 | 10.4 | -0.604 | -- | -0.924 | -- | -- | -0.0383 | -- | 27.65 | 763 | -- | -- |
| 47.51 | 0.321 | 10.4 | -- | 0.625 | -0.543 | -- | -- | 0.0967 | 23 | 27 | 170 | -- | -- |
| 70.31 | 0.392 | 10.4 | -0.338 | -- | -- | -- | -- | 0.162 | -- | -- | -- | -- | -- |
| 52.16 | 0.338 | 10.4 | -- | 0.591 | -- | -- | -- | 0.2 | 22.2 | -- | -- | -- | -- |
| 64.38 | 0.374 | 10.4 | -- | -- | -0.687 | -- | -- | 0.0769 | -- | 28.5 | 744 | -- | -- |
| 73.33 | 0.4 | 10.4 | -- | -- | -- | -- | -- | 0.2 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 38.22 | temperature | 20 | 90 | > th | dose independent | rect. | 8 | 20 |
| 2 | 38.49 | temperature | 15 | 10 | > th | dose dependent | rect. | 7 | 22 |
| 6 | 38.59 | temperature | 15 | 90 | > th | dose dependent | rect. | 8 | 20 |
| 28 | 39.31 | temperature | 20 | 90 | > th | dose independent | rect. | 19 | 9 |
| 39 | 39.57 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 22 |
| 42 | 39.62 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 48 | 39.75 | temperature | 20 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 49 | 39.75 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 50 | 39.75 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 22 |
| 61 | 39.82 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 3 |
| 62 | 39.83 | temperature | 30 | 90 | < th | dose dependent | rect. | 14 | 23 |
| 64 | 39.87 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 3 |
| 65 | 39.87 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 13 |
| 66 | 39.87 | humidity | 90 | 14400 | > th | dose dependent | rect. | 4 | 3 |
| 71 | 39.88 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 72 | 39.89 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 13 |
| 78 | 39.92 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 95 | 39.95 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 8 |
| 99 | 39.96 | temperature | 20 | 1440 | < th | dose independent | sin | 9 | NA |
| 111 | 39.98 | temperature | 20 | 1440 | > th | dose independent | sin | 9 | NA |
| 113 | 39.98 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 5 |
| 118 | 39.99 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 5 |
| 120 | 39.99 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 8 |
| 124 | 39.99 | humidity | 90 | 14400 | > th | dose dependent | rect. | 2 | 8 |
| 138 | 40.01 | temperature | 30 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 158 | 40.03 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 169 | 40.04 | humidity | 90 | 14400 | > th | dose dependent | rect. | 3 | 6 |
| 177 | 40.05 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 8 |
| 178 | 40.05 | humidity | 90 | 14400 | > th | dose dependent | rect. | 23 | 12 |
| 240 | 40.12 | temperature | 10 | 1440 | > th | dose dependent | rect. | 2 | 1 |
| 255 | 40.13 | humidity | 90 | 14400 | > th | dose dependent | sin | 7 | NA |
| 263 | 40.14 | temperature | 20 | 10 | > th | dose independent | rect. | 20 | 9 |
| 274 | 40.14 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 23 |
| 287 | 40.15 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 14 |
| 314 | 40.17 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 360 | 40.21 | temperature | 25 | 1440 | < th | dose dependent | rect. | 2 | 1 |
| 377 | 40.22 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 3 |
| 404 | 40.24 | temperature | 20 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 418 | 40.25 | temperature | 25 | 1440 | < th | dose dependent | sin | 10 | NA |
| 439 | 40.26 | humidity | 90 | 14400 | > th | dose dependent | rect. | 15 | 14 |
| 533 | 40.32 | wind | 1 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 590 | 40.35 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 9 |
| 674 | 40.40 | wind | 1 | 90 | < th | dose independent | rect. | 8 | 20 |
| 839 | 40.49 | humidity | 90 | 14400 | > th | dose dependent | rect. | 23 | 2 |
| 851 | 40.50 | temperature | 20 | 90 | < th | dose independent | rect. | 11 | 18 |
| 883 | 40.51 | temperature | 30 | 90 | < th | dose dependent | rect. | 19 | 23 |
| 887 | 40.52 | temperature | 20 | 90 | < th | dose independent | rect. | 11 | 20 |
| 967 | 40.56 | temperature | 30 | 90 | < th | dose dependent | rect. | 17 | 23 |